RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 FOXO3O43524 673 aa9.54□□□□□ -0.88
LINC00173-202ENST00000477702 PRSS12P56730 875 aa9.54□□□□□ -0.88
LINC00173-202ENST00000477702 PROX2Q3B8N5 592 aa9.54□□□□□ -0.88
LINC00173-202ENST00000477702 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
LINC00173-202ENST00000477702 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
LINC00173-202ENST00000477702 MARF1Q9Y4F3 1742 aaKnown RBP9.53□□□□□ -0.88
LINC00173-202ENST00000477702 PTPN23Q9H3S7 1636 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 SLIT2O94813 1529 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 TRIM66O15016 1216 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 FAM182BQ5T319 152 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 ZNF687Q8N1G0 1237 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 SPHKAPQ2M3C7 1700 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 NPHP3Q7Z494 1330 aa9.53□□□□□ -0.88
LINC00173-202ENST00000477702 VPS72Q15906 364 aa9.52□□□□□ -0.89
LINC00173-202ENST00000477702 ZNF326Q5BKZ1 582 aaKnown RBP9.52□□□□□ -0.89
LINC00173-202ENST00000477702 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
LINC00173-202ENST00000477702 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.52□□□□□ -0.89
LINC00173-202ENST00000477702 PXDNQ92626 1479 aa9.52□□□□□ -0.89
LINC00173-202ENST00000477702 ROBO2Q9HCK4 1378 aa9.51□□□□□ -0.89
LINC00173-202ENST00000477702 ARHGAP33O14559 1287 aa9.51□□□□□ -0.89
LINC00173-202ENST00000477702 ONECUT3O60422 494 aaPredicted RBP9.51□□□□□ -0.89
LINC00173-202ENST00000477702 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
LINC00173-202ENST00000477702 EZH2Q15910 746 aaKnown RBP9.51□□□□□ -0.89
LINC00173-202ENST00000477702 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
LINC00173-202ENST00000477702 PHOX2BQ99453 314 aa9.51□□□□□ -0.89
LINC00173-202ENST00000477702 ANKRD50Q9ULJ7 1429 aa9.5□□□□□ -0.89
LINC00173-202ENST00000477702 FAM98CQ17RN3 349 aaKnown RBP9.5□□□□□ -0.89
LINC00173-202ENST00000477702 ZBED2Q9BTP6 218 aa9.5□□□□□ -0.89
LINC00173-202ENST00000477702 E9PCH4 1651 aa9.49□□□□□ -0.89
LINC00173-202ENST00000477702 ZNF784Q8NCA9 323 aaPredicted RBP9.49□□□□□ -0.89
LINC00173-202ENST00000477702 CABLES1Q8TDN4 633 aa9.49□□□□□ -0.89
LINC00173-202ENST00000477702 GPBP1L1Q9HC44 474 aaPredicted RBP9.49□□□□□ -0.89
LINC00173-202ENST00000477702 PPP1R1BQ9UD71 204 aaPredicted RBP9.49□□□□□ -0.89
LINC00173-202ENST00000477702 ADGRG1Q9Y653 693 aa9.49□□□□□ -0.89
LINC00173-202ENST00000477702 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
LINC00173-202ENST00000477702 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
LINC00173-202ENST00000477702 ADGRL2O95490 1459 aa9.47□□□□□ -0.89
LINC00173-202ENST00000477702 SMAPO00193 183 aa9.47□□□□□ -0.89
LINC00173-202ENST00000477702 PDE4DQ08499 809 aa9.47□□□□□ -0.89
LINC00173-202ENST00000477702 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
LINC00173-202ENST00000477702 VPS8Q8N3P4 1428 aa9.47□□□□□ -0.89
LINC00173-202ENST00000477702 USP32Q8NFA0 1604 aa9.46□□□□□ -0.89
LINC00173-202ENST00000477702 CAMKK2Q96RR4 588 aa9.46□□□□□ -0.9
LINC00173-202ENST00000477702 SPATA31A3Q5VYP0 1347 aa9.46□□□□□ -0.9
LINC00173-202ENST00000477702 TRIM37O94972 964 aa9.45□□□□□ -0.9
LINC00173-202ENST00000477702 PBX2P40425 430 aa9.45□□□□□ -0.9
LINC00173-202ENST00000477702 C1QTNF8P60827 252 aa9.45□□□□□ -0.9
LINC00173-202ENST00000477702 FAM50AQ14320 339 aaKnown RBP9.45□□□□□ -0.9
LINC00173-202ENST00000477702 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
LINC00173-202ENST00000477702 METTL3Q86U44 580 aaKnown RBP9.45□□□□□ -0.9
LINC00173-202ENST00000477702 REPIN1Q9BWE0 567 aaKnown RBP9.45□□□□□ -0.9
LINC00173-202ENST00000477702 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
LINC00173-202ENST00000477702 CEP350Q5VT06 3117 aa9.45□□□□□ -0.9
LINC00173-202ENST00000477702 RGPD1P0DJD0 1748 aa9.45□□□□□ -0.9
LINC00173-202ENST00000477702 FAM83GA6ND36 823 aa9.44□□□□□ -0.9
LINC00173-202ENST00000477702 KRT28Q7Z3Y7 464 aa9.44□□□□□ -0.9
LINC00173-202ENST00000477702 PXYLP1Q8TE99 480 aa9.44□□□□□ -0.9
LINC00173-202ENST00000477702 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
LINC00173-202ENST00000477702 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
LINC00173-202ENST00000477702 IQGAP3Q86VI3 1631 aa9.44□□□□□ -0.9
LINC00173-202ENST00000477702 CAMTA1Q9Y6Y1 1673 aa9.44□□□□□ -0.9
LINC00173-202ENST00000477702 PLCH1Q4KWH8 1693 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 DISP2A7MBM2 1401 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 APBA3O96018 575 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 AMHR2Q16671 573 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 PARP9Q8IXQ6 854 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 TATDN2Q93075 761 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 EYA1Q99502 592 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 PNMA3Q9UL41 463 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 VPS9D1Q9Y2B5 631 aa9.43□□□□□ -0.9
LINC00173-202ENST00000477702 TNS1Q9HBL0 1735 aaKnown RBP9.42□□□□□ -0.9
LINC00173-202ENST00000477702 HFM1A2PYH4 1435 aa9.42□□□□□ -0.9
LINC00173-202ENST00000477702 NUP155O75694 1391 aa9.42□□□□□ -0.9
LINC00173-202ENST00000477702 NINLQ9Y2I6 1382 aa9.42□□□□□ -0.9
LINC00173-202ENST00000477702 KCNQ2O43526 872 aa9.42□□□□□ -0.9
LINC00173-202ENST00000477702 MDM2Q00987 491 aaPredicted RBP9.42□□□□□ -0.9
LINC00173-202ENST00000477702 SEPT9Q9UHD8 586 aaPredicted RBP9.42□□□□□ -0.9
LINC00173-202ENST00000477702 NEXMIFQ5QGS0 1516 aa9.41□□□□□ -0.9
LINC00173-202ENST00000477702 OATP04181 439 aa9.41□□□□□ -0.9
LINC00173-202ENST00000477702 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00173-202ENST00000477702 PACS2Q86VP3 889 aa9.41□□□□□ -0.9
LINC00173-202ENST00000477702 BTG4Q9NY30 223 aa9.41□□□□□ -0.9
LINC00173-202ENST00000477702 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
LINC00173-202ENST00000477702 NAIPQ13075 1403 aa9.4□□□□□ -0.9
LINC00173-202ENST00000477702 NWD2Q9ULI1 1742 aa9.4□□□□□ -0.9
LINC00173-202ENST00000477702 NBPF8Q3BBV2 869 aa9.4□□□□□ -0.9
LINC00173-202ENST00000477702 NBPF14Q5TI25 921 aa9.4□□□□□ -0.9
LINC00173-202ENST00000477702 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
LINC00173-202ENST00000477702 WAPLQ7Z5K2 1190 aa9.4□□□□□ -0.9
LINC00173-202ENST00000477702 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
LINC00173-202ENST00000477702 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
LINC00173-202ENST00000477702 RCCD1A6NED2 376 aa9.39□□□□□ -0.91
LINC00173-202ENST00000477702 NBPF26B4DH59 902 aa9.39□□□□□ -0.91
LINC00173-202ENST00000477702 TTLL12Q14166 644 aaPredicted RBP9.39□□□□□ -0.91
LINC00173-202ENST00000477702 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
LINC00173-202ENST00000477702 SLC4A5Q9BY07 1137 aa9.39□□□□□ -0.91
LINC00173-202ENST00000477702 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
LINC00173-202ENST00000477702 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
LINC00173-202ENST00000477702 STK26Q9P289 416 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms