RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 SBNO2Q9Y2G9 1366 aa10.99□□□□□ -0.65
RBBP4-211ENST00000477563 FAM208AQ9UK61 1670 aaKnown RBP10.98□□□□□ -0.65
RBBP4-211ENST00000477563 CSB-PGBD3P0DP91 1061 aa10.98□□□□□ -0.65
RBBP4-211ENST00000477563 KTN1Q86UP2 1357 aaKnown RBP10.98□□□□□ -0.65
RBBP4-211ENST00000477563 CD163L1Q9NR16 1453 aa10.98□□□□□ -0.65
RBBP4-211ENST00000477563 LY75O60449 1722 aa10.98□□□□□ -0.65
RBBP4-211ENST00000477563 TUBGCP6Q96RT7 1819 aa10.98□□□□□ -0.65
RBBP4-211ENST00000477563 IL2RBP14784 551 aa10.97□□□□□ -0.65
RBBP4-211ENST00000477563 C1QTNF8P60827 252 aa10.97□□□□□ -0.65
RBBP4-211ENST00000477563 SLC16A10Q8TF71 515 aa10.97□□□□□ -0.65
RBBP4-211ENST00000477563 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
RBBP4-211ENST00000477563 KAT6BQ8WYB5 2073 aa10.96□□□□□ -0.65
RBBP4-211ENST00000477563 LRRC4BQ9NT99 713 aa10.96□□□□□ -0.65
RBBP4-211ENST00000477563 ZNF827Q17R98 1081 aa10.95□□□□□ -0.66
RBBP4-211ENST00000477563 SLC27A3Q5K4L6 730 aa10.95□□□□□ -0.66
RBBP4-211ENST00000477563 ACSBG1Q96GR2 724 aa10.95□□□□□ -0.66
RBBP4-211ENST00000477563 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
RBBP4-211ENST00000477563 SOX12O15370 315 aa10.94□□□□□ -0.66
RBBP4-211ENST00000477563 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
RBBP4-211ENST00000477563 SHANK3Q9BYB0 1731 aa10.94□□□□□ -0.66
RBBP4-211ENST00000477563 ROCK2O75116 1388 aaKnown RBP10.93□□□□□ -0.66
RBBP4-211ENST00000477563 ANKRD24Q8TF21 1146 aa10.93□□□□□ -0.66
RBBP4-211ENST00000477563 EDC4Q6P2E9 1401 aaKnown RBP10.92□□□□□ -0.66
RBBP4-211ENST00000477563 PNPLA7Q6ZV29 1317 aa10.92□□□□□ -0.66
RBBP4-211ENST00000477563 SENP3-EIF4A1A0A087X0R7 540 aa10.92□□□□□ -0.66
RBBP4-211ENST00000477563 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
RBBP4-211ENST00000477563 TRIM26Q12899 539 aaPredicted RBP10.92□□□□□ -0.66
RBBP4-211ENST00000477563 PUS7Q96PZ0 661 aaKnown RBP10.92□□□□□ -0.66
RBBP4-211ENST00000477563 NLRP2Q9NX02 1062 aa10.92□□□□□ -0.66
RBBP4-211ENST00000477563 DOT1LQ8TEK3 1739 aa10.92□□□□□ -0.66
RBBP4-211ENST00000477563 NME9Q86XW9 330 aa10.91□□□□□ -0.66
RBBP4-211ENST00000477563 NSD2O96028 1365 aa10.9□□□□□ -0.66
RBBP4-211ENST00000477563 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
RBBP4-211ENST00000477563 HAX1O00165 279 aa10.9□□□□□ -0.66
RBBP4-211ENST00000477563 GPR162Q16538 588 aa10.9□□□□□ -0.66
RBBP4-211ENST00000477563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.9□□□□□ -0.66
RBBP4-211ENST00000477563 IP6K1Q92551 441 aa10.9□□□□□ -0.66
RBBP4-211ENST00000477563 RGPD2P0DJD1 1756 aa10.9□□□□□ -0.67
RBBP4-211ENST00000477563 POLD1P28340 1107 aa10.89□□□□□ -0.67
RBBP4-211ENST00000477563 HDGFL2Q7Z4V5 671 aaPredicted RBP10.88□□□□□ -0.67
RBBP4-211ENST00000477563 TAF1LQ8IZX4 1826 aa10.88□□□□□ -0.67
RBBP4-211ENST00000477563 A0A1W2PP64 1363 aa10.88□□□□□ -0.67
RBBP4-211ENST00000477563 GIGYF1O75420 1035 aaPredicted RBP10.87□□□□□ -0.67
RBBP4-211ENST00000477563 IFFO2Q5TF58 517 aa10.87□□□□□ -0.67
RBBP4-211ENST00000477563 SIN3AQ96ST3 1273 aa10.87□□□□□ -0.67
RBBP4-211ENST00000477563 SLC12A5Q9H2X9 1139 aa10.87□□□□□ -0.67
RBBP4-211ENST00000477563 C5P01031 1676 aa10.86□□□□□ -0.67
RBBP4-211ENST00000477563 GRIN3BO60391 1043 aa10.86□□□□□ -0.67
RBBP4-211ENST00000477563 PRIM1P49642 420 aaKnown RBP10.86□□□□□ -0.67
RBBP4-211ENST00000477563 NLGN2Q8NFZ4 835 aa10.86□□□□□ -0.67
RBBP4-211ENST00000477563 DDX54Q8TDD1 881 aaKnown RBP10.86□□□□□ -0.67
RBBP4-211ENST00000477563 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
RBBP4-211ENST00000477563 TERF2IPQ9NYB0 399 aa10.86□□□□□ -0.67
RBBP4-211ENST00000477563 TFCP2L1Q9NZI6 479 aa10.86□□□□□ -0.67
RBBP4-211ENST00000477563 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
RBBP4-211ENST00000477563 CGNL1Q0VF96 1302 aa10.84□□□□□ -0.67
RBBP4-211ENST00000477563 MEGF6O75095 1541 aa10.84□□□□□ -0.67
RBBP4-211ENST00000477563 YBX3P16989 372 aaKnown RBP eCLIP10.84□□□□□ -0.675e-18■□□□□ 10.5
RBBP4-211ENST00000477563 HMGB2P26583 209 aaKnown RBP10.84□□□□□ -0.67
RBBP4-211ENST00000477563 HOXC9P31274 260 aa10.84□□□□□ -0.67
RBBP4-211ENST00000477563 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
RBBP4-211ENST00000477563 TMC1Q8TDI8 760 aa10.84□□□□□ -0.67
RBBP4-211ENST00000477563 MAP3K19Q56UN5 1328 aa10.84□□□□□ -0.67
RBBP4-211ENST00000477563 RTL1A6NKG5 1358 aa10.83□□□□□ -0.68
RBBP4-211ENST00000477563 KCNQ4P56696 695 aa10.83□□□□□ -0.68
RBBP4-211ENST00000477563 COL23A1Q86Y22 540 aaPredicted RBP10.83□□□□□ -0.68
RBBP4-211ENST00000477563 CARD11Q9BXL7 1154 aa10.83□□□□□ -0.68
RBBP4-211ENST00000477563 ITGB4P16144 1822 aa10.82□□□□□ -0.68
RBBP4-211ENST00000477563 ADCY9O60503 1353 aa10.82□□□□□ -0.68
RBBP4-211ENST00000477563 USP47Q96K76 1375 aa10.82□□□□□ -0.68
RBBP4-211ENST00000477563 CCNL1Q9UK58 526 aaPredicted RBP10.82□□□□□ -0.68
RBBP4-211ENST00000477563 CD2APQ9Y5K6 639 aa10.82□□□□□ -0.68
RBBP4-211ENST00000477563 CLSPNQ9HAW4 1339 aa10.82□□□□□ -0.68
RBBP4-211ENST00000477563 TOGARAM1Q9Y4F4 1720 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 UBR3Q6ZT12 1888 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 NEUROD1Q13562 356 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 KLHL34Q8N239 644 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 FLAD1Q8NFF5 587 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 SYTL4Q96C24 671 aaPredicted RBP10.81□□□□□ -0.68
RBBP4-211ENST00000477563 COG3Q96JB2 828 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 TESK2Q96S53 571 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 C4BP0C0L5 1744 aa10.81□□□□□ -0.68
RBBP4-211ENST00000477563 MAP2P11137 1827 aaKnown RBP10.8□□□□□ -0.68
RBBP4-211ENST00000477563 LTV1Q96GA3 475 aaPredicted RBP10.8□□□□□ -0.68
RBBP4-211ENST00000477563 PKD1L3Q7Z443 1732 aa10.8□□□□□ -0.68
RBBP4-211ENST00000477563 ATP10DQ9P241 1426 aa10.79□□□□□ -0.68
RBBP4-211ENST00000477563 AMPHP49418 695 aa10.79□□□□□ -0.68
RBBP4-211ENST00000477563 EVX2Q03828 476 aa10.79□□□□□ -0.68
RBBP4-211ENST00000477563 NBPF6Q5VWK0 638 aa10.79□□□□□ -0.68
RBBP4-211ENST00000477563 PELP1Q8IZL8 1130 aaKnown RBP10.79□□□□□ -0.68
RBBP4-211ENST00000477563 NBPF4Q96M43 638 aa10.79□□□□□ -0.68
RBBP4-211ENST00000477563 KIF24Q5T7B8 1368 aa10.78□□□□□ -0.68
RBBP4-211ENST00000477563 KIF13BQ9NQT8 1826 aa10.78□□□□□ -0.68
RBBP4-211ENST00000477563 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.68
RBBP4-211ENST00000477563 CICQ96RK0 1608 aaPredicted RBP10.77□□□□□ -0.68
RBBP4-211ENST00000477563 NCAPD2Q15021 1401 aa10.77□□□□□ -0.68
RBBP4-211ENST00000477563 FBLN1P23142 703 aa10.77□□□□□ -0.69
RBBP4-211ENST00000477563 FKBP8Q14318 412 aa10.77□□□□□ -0.69
RBBP4-211ENST00000477563 PCDH11XQ9BZA7 1347 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms