RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 NSD2O96028 1365 aa24.19■■□□□ 1.46
PTPN7-209ENST00000477554 NHSQ6T4R5 1651 aa24.19■■□□□ 1.46
PTPN7-209ENST00000477554 EIF4A2Q14240 407 aaKnown RBP24.18■■□□□ 1.46
PTPN7-209ENST00000477554 CC2D1BQ5T0F9 858 aaKnown RBP24.18■■□□□ 1.46
PTPN7-209ENST00000477554 EYA1Q99502 592 aa24.18■■□□□ 1.46
PTPN7-209ENST00000477554 BCL11BQ9C0K0 894 aaPredicted RBP24.18■■□□□ 1.46
PTPN7-209ENST00000477554 NCAPD2Q15021 1401 aa24.17■■□□□ 1.46
PTPN7-209ENST00000477554 PROM2Q8N271 834 aa24.17■■□□□ 1.46
PTPN7-209ENST00000477554 DOT1LQ8TEK3 1739 aa24.15■■□□□ 1.46
PTPN7-209ENST00000477554 ZCRB1Q8TBF4 217 aaKnown RBP24.15■■□□□ 1.46
PTPN7-209ENST00000477554 BTAF1O14981 1849 aa24.15■■□□□ 1.46
PTPN7-209ENST00000477554 KAT6BQ8WYB5 2073 aa24.15■■□□□ 1.46
PTPN7-209ENST00000477554 R3HDM1Q15032 1099 aaKnown RBP24.13■■□□□ 1.45
PTPN7-209ENST00000477554 RGPD3A6NKT7 1758 aaPredicted RBP24.11■■□□□ 1.45
PTPN7-209ENST00000477554 RGPD4Q7Z3J3 1758 aa24.11■■□□□ 1.45
PTPN7-209ENST00000477554 RAPGEF4Q8WZA2 1011 aa24.11■■□□□ 1.45
PTPN7-209ENST00000477554 PKD1L3Q7Z443 1732 aa24.11■■□□□ 1.45
PTPN7-209ENST00000477554 TATP17735 454 aaPredicted RBP24.1■■□□□ 1.45
PTPN7-209ENST00000477554 CYP27B1O15528 508 aa24.1■■□□□ 1.45
PTPN7-209ENST00000477554 ANO8Q9HCE9 1232 aaPredicted RBP24.1■■□□□ 1.45
PTPN7-209ENST00000477554 TOGARAM1Q9Y4F4 1720 aa24.09■■□□□ 1.45
PTPN7-209ENST00000477554 PLSCR1O15162 318 aa24.09■■□□□ 1.45
PTPN7-209ENST00000477554 PARD3Q8TEW0 1356 aa24.09■■□□□ 1.45
PTPN7-209ENST00000477554 AEBP1Q8IUX7 1158 aa24.08■■□□□ 1.44
PTPN7-209ENST00000477554 PRIM1P49642 420 aaKnown RBP24.07■■□□□ 1.44
PTPN7-209ENST00000477554 IGSF1Q8N6C5 1336 aa24.06■■□□□ 1.44
PTPN7-209ENST00000477554 MTHFSP49914 203 aa24.06■■□□□ 1.44
PTPN7-209ENST00000477554 SYTL4Q96C24 671 aaPredicted RBP24.05■■□□□ 1.44
PTPN7-209ENST00000477554 TXNRD1Q16881 649 aa24.04■■□□□ 1.44
PTPN7-209ENST00000477554 IL13P35225 146 aa24.03■■□□□ 1.44
PTPN7-209ENST00000477554 KCNQ4P56696 695 aa24.03■■□□□ 1.44
PTPN7-209ENST00000477554 PDGFDQ9GZP0 370 aaPredicted RBP24.02■■□□□ 1.44
PTPN7-209ENST00000477554 PCDH11XQ9BZA7 1347 aa24.01■■□□□ 1.43
PTPN7-209ENST00000477554 PCDH11YQ9BZA8 1340 aa24.01■■□□□ 1.43
PTPN7-209ENST00000477554 NPC1L1Q9UHC9 1359 aa24.01■■□□□ 1.43
PTPN7-209ENST00000477554 LRRC4BQ9NT99 713 aa24.01■■□□□ 1.43
PTPN7-209ENST00000477554 ITGB4P16144 1822 aa24■■□□□ 1.43
PTPN7-209ENST00000477554 COL3A1P02461 1466 aaPredicted RBP23.99■■□□□ 1.43
PTPN7-209ENST00000477554 PAPPAQ13219 1627 aa23.99■■□□□ 1.43
PTPN7-209ENST00000477554 SULT6B1Q6IMI4 303 aa23.97■■□□□ 1.43
PTPN7-209ENST00000477554 LY75O60449 1722 aa23.95■■□□□ 1.43
PTPN7-209ENST00000477554 PHKG2P15735 406 aa23.94■■□□□ 1.42
PTPN7-209ENST00000477554 SPG7Q9UQ90 795 aa23.94■■□□□ 1.42
PTPN7-209ENST00000477554 HMOX1P09601 288 aa23.93■■□□□ 1.42
PTPN7-209ENST00000477554 ZNF827Q17R98 1081 aa23.93■■□□□ 1.42
PTPN7-209ENST00000477554 NBPF14Q5TI25 921 aa23.93■■□□□ 1.42
PTPN7-209ENST00000477554 MPRIPQ6WCQ1 1025 aa23.93■■□□□ 1.42
PTPN7-209ENST00000477554 CASZ1Q86V15 1759 aa23.93■■□□□ 1.42
PTPN7-209ENST00000477554 KDRP35968 1356 aa23.93■■□□□ 1.42
PTPN7-209ENST00000477554 NKX1-1Q15270 411 aaPredicted RBP23.93■■□□□ 1.42
PTPN7-209ENST00000477554 LRP5O75197 1615 aa23.93■■□□□ 1.42
PTPN7-209ENST00000477554 PIGBQ92521 554 aa23.91■■□□□ 1.42
PTPN7-209ENST00000477554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.91■■□□□ 1.42
PTPN7-209ENST00000477554 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
PTPN7-209ENST00000477554 TUBGCP6Q96RT7 1819 aa23.89■■□□□ 1.42
PTPN7-209ENST00000477554 KDM6AO15550 1401 aaPredicted RBP23.89■■□□□ 1.41
PTPN7-209ENST00000477554 DIAPH1O60610 1272 aaKnown RBP23.88■■□□□ 1.41
PTPN7-209ENST00000477554 PPP2R1AP30153 589 aa23.88■■□□□ 1.41
PTPN7-209ENST00000477554 SLC15A2Q16348 729 aa23.88■■□□□ 1.41
PTPN7-209ENST00000477554 IFNL2Q8IZJ0 200 aa23.88■■□□□ 1.41
PTPN7-209ENST00000477554 ZNF530Q6P9A1 599 aaPredicted RBP23.87■■□□□ 1.41
PTPN7-209ENST00000477554 DDX10Q13206 875 aaKnown RBP23.85■■□□□ 1.41
PTPN7-209ENST00000477554 STK32BQ9NY57 414 aa23.85■■□□□ 1.41
PTPN7-209ENST00000477554 PLEKHO1Q53GL0 409 aaPredicted RBP23.84■■□□□ 1.41
PTPN7-209ENST00000477554 AKT1S1Q96B36 256 aa23.84■■□□□ 1.41
PTPN7-209ENST00000477554 PALLDQ8WX93 1383 aa23.84■■□□□ 1.41
PTPN7-209ENST00000477554 CCNL1Q9UK58 526 aaPredicted RBP23.84■■□□□ 1.41
PTPN7-209ENST00000477554 ASAP1Q9ULH1 1129 aa23.84■■□□□ 1.41
PTPN7-209ENST00000477554 ZBTB7AO95365 584 aa23.83■■□□□ 1.4
PTPN7-209ENST00000477554 TAF1LQ8IZX4 1826 aa23.82■■□□□ 1.4
PTPN7-209ENST00000477554 U2SURPO15042 1029 aaKnown RBP23.82■■□□□ 1.4
PTPN7-209ENST00000477554 C5P01031 1676 aa23.81■■□□□ 1.4
PTPN7-209ENST00000477554 SLC27A3Q5K4L6 730 aa23.81■■□□□ 1.4
PTPN7-209ENST00000477554 MTHFSDQ2M296 383 aaKnown RBP23.8■■□□□ 1.4
PTPN7-209ENST00000477554 SMIM5Q71RC9 77 aa23.8■■□□□ 1.4
PTPN7-209ENST00000477554 TMOD3Q9NYL9 352 aa23.8■■□□□ 1.4
PTPN7-209ENST00000477554 VIRMAQ69YN4 1812 aaKnown RBP23.8■■□□□ 1.4
PTPN7-209ENST00000477554 PLEKHG2Q9H7P9 1386 aa23.79■■□□□ 1.4
PTPN7-209ENST00000477554 AMOTQ4VCS5 1084 aa23.79■■□□□ 1.4
PTPN7-209ENST00000477554 AMIGO3Q86WK7 504 aa23.79■■□□□ 1.4
PTPN7-209ENST00000477554 ATG3Q9NT62 314 aa23.79■■□□□ 1.4
PTPN7-209ENST00000477554 LGR6Q9HBX8 967 aa23.78■■□□□ 1.4
PTPN7-209ENST00000477554 ATF5Q9Y2D1 282 aaPredicted RBP23.78■■□□□ 1.4
PTPN7-209ENST00000477554 SCN11AQ9UI33 1791 aa23.78■■□□□ 1.4
PTPN7-209ENST00000477554 DCAF5Q96JK2 942 aa23.77■■□□□ 1.4
PTPN7-209ENST00000477554 PNPLA7Q6ZV29 1317 aa23.77■■□□□ 1.4
PTPN7-209ENST00000477554 SLC4A9Q96Q91 983 aa23.76■■□□□ 1.39
PTPN7-209ENST00000477554 QSER1Q2KHR3 1735 aa23.75■■□□□ 1.39
PTPN7-209ENST00000477554 PTGER2P43116 358 aa23.75■■□□□ 1.39
PTPN7-209ENST00000477554 ITPK1Q13572 414 aa23.75■■□□□ 1.39
PTPN7-209ENST00000477554 C1orf141Q5JVX7 400 aa23.75■■□□□ 1.39
PTPN7-209ENST00000477554 PHACTR3Q96KR7 559 aa23.75■■□□□ 1.39
PTPN7-209ENST00000477554 LINC00116Q8NCU8 138 aa23.74■■□□□ 1.39
PTPN7-209ENST00000477554 C4BP0C0L5 1744 aa23.74■■□□□ 1.39
PTPN7-209ENST00000477554 ERVV-2B6SEH9 535 aa23.73■■□□□ 1.39
PTPN7-209ENST00000477554 NFATC2IPQ8NCF5 419 aa23.73■■□□□ 1.39
PTPN7-209ENST00000477554 RSPH6AQ9H0K4 717 aa23.73■■□□□ 1.39
PTPN7-209ENST00000477554 SPON1Q9HCB6 807 aa23.73■■□□□ 1.39
PTPN7-209ENST00000477554 LOC102724428A0A0B4J2F2 783 aa23.72■■□□□ 1.39
PTPN7-209ENST00000477554 SIK1P57059 783 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms