RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 SEC24BO95487 1268 aa10.4□□□□□ -0.74
PTPRD-209ENST00000477552 SULT6B1Q6IMI4 303 aa10.4□□□□□ -0.74
PTPRD-209ENST00000477552 ANKRD44Q8N8A2 993 aa10.4□□□□□ -0.74
PTPRD-209ENST00000477552 GBP4Q96PP9 640 aa10.4□□□□□ -0.74
PTPRD-209ENST00000477552 HDAC5Q9UQL6 1122 aa10.4□□□□□ -0.74
PTPRD-209ENST00000477552 TNNQ9UQP3 1299 aa10.4□□□□□ -0.74
PTPRD-209ENST00000477552 NCOA3Q9Y6Q9 1424 aa10.4□□□□□ -0.75
PTPRD-209ENST00000477552 PXDNLA1KZ92 1463 aa10.39□□□□□ -0.75
PTPRD-209ENST00000477552 GOLGA6L22H0YM25 854 aa10.39□□□□□ -0.75
PTPRD-209ENST00000477552 FRAT2O75474 233 aaPredicted RBP10.39□□□□□ -0.75
PTPRD-209ENST00000477552 GNAI3P08754 354 aa10.39□□□□□ -0.75
PTPRD-209ENST00000477552 MFAP1P55081 439 aaKnown RBP10.39□□□□□ -0.75
PTPRD-209ENST00000477552 STK31Q9BXU1 1019 aa10.39□□□□□ -0.75
PTPRD-209ENST00000477552 ADGRL3Q9HAR2 1447 aa10.39□□□□□ -0.75
PTPRD-209ENST00000477552 IGSF1Q8N6C5 1336 aa10.38□□□□□ -0.75
PTPRD-209ENST00000477552 REC8O95072 547 aa10.38□□□□□ -0.75
PTPRD-209ENST00000477552 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
PTPRD-209ENST00000477552 RABEP1Q15276 862 aa10.38□□□□□ -0.75
PTPRD-209ENST00000477552 CCDC30Q5VVM6 783 aa10.38□□□□□ -0.75
PTPRD-209ENST00000477552 LNPKQ9C0E8 428 aa10.38□□□□□ -0.75
PTPRD-209ENST00000477552 AMOTL2Q9Y2J4 779 aa10.38□□□□□ -0.75
PTPRD-209ENST00000477552 LRRC37A3O60309 1634 aa10.37□□□□□ -0.75
PTPRD-209ENST00000477552 PHRF1Q9P1Y6 1649 aaKnown RBP10.37□□□□□ -0.75
PTPRD-209ENST00000477552 HOXB7P09629 217 aa10.37□□□□□ -0.75
PTPRD-209ENST00000477552 AMPHP49418 695 aa10.37□□□□□ -0.75
PTPRD-209ENST00000477552 CRB1P82279 1406 aa10.37□□□□□ -0.75
PTPRD-209ENST00000477552 RRS1Q15050 365 aaKnown RBP10.37□□□□□ -0.75
PTPRD-209ENST00000477552 C8orf58Q8NAV2 365 aa10.37□□□□□ -0.75
PTPRD-209ENST00000477552 NGDNQ8NEJ9 315 aaKnown RBP10.37□□□□□ -0.75
PTPRD-209ENST00000477552 SRCIN1Q9C0H9 1055 aa10.37□□□□□ -0.75
PTPRD-209ENST00000477552 PEAK1Q9H792 1746 aa10.36□□□□□ -0.75
PTPRD-209ENST00000477552 HSP90AB1P08238 724 aaKnown RBP10.36□□□□□ -0.75
PTPRD-209ENST00000477552 MCM4P33991 863 aa10.36□□□□□ -0.75
PTPRD-209ENST00000477552 MCM2P49736 904 aa10.36□□□□□ -0.75
PTPRD-209ENST00000477552 TSPYL6Q8N831 410 aa10.36□□□□□ -0.75
PTPRD-209ENST00000477552 OSBPL3Q9H4L5 887 aa10.36□□□□□ -0.75
PTPRD-209ENST00000477552 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
PTPRD-209ENST00000477552 MSH6P52701 1360 aa10.36□□□□□ -0.75
PTPRD-209ENST00000477552 PLEKHG2Q9H7P9 1386 aa10.36□□□□□ -0.75
PTPRD-209ENST00000477552 SETD1BQ9UPS6 1966 aaKnown RBP10.35□□□□□ -0.75
PTPRD-209ENST00000477552 HSP90AA1P07900 732 aaKnown RBP10.35□□□□□ -0.75
PTPRD-209ENST00000477552 LTKP29376 864 aa10.35□□□□□ -0.75
PTPRD-209ENST00000477552 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
PTPRD-209ENST00000477552 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 ZNF142P52746 1687 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-209ENST00000477552 AOX1Q06278 1338 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 MAP3K19Q56UN5 1328 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 OVOS2A0A0G2JMS6 1433 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 GNAT3A8MTJ3 354 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 K7ELQ4 463 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-209ENST00000477552 ST18O60284 1047 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 NUCB2P80303 420 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 TTC22Q5TAA0 569 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 CLEC17AQ6ZS10 378 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
PTPRD-209ENST00000477552 TSPYL4Q9UJ04 414 aa10.34□□□□□ -0.75
PTPRD-209ENST00000477552 CHD2O14647 1828 aaKnown RBP10.34□□□□□ -0.75
PTPRD-209ENST00000477552 GNAI2P04899 355 aa10.33□□□□□ -0.76
PTPRD-209ENST00000477552 TBC1D9Q6ZT07 1266 aa10.33□□□□□ -0.76
PTPRD-209ENST00000477552 PLEKHM2Q8IWE5 1019 aa10.33□□□□□ -0.76
PTPRD-209ENST00000477552 LMTK3Q96Q04 1460 aa10.33□□□□□ -0.76
PTPRD-209ENST00000477552 RGS12O14924 1447 aa10.33□□□□□ -0.76
PTPRD-209ENST00000477552 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
PTPRD-209ENST00000477552 ATP10DQ9P241 1426 aa10.33□□□□□ -0.76
PTPRD-209ENST00000477552 RGPD8O14715 1765 aaPredicted RBP10.32□□□□□ -0.76
PTPRD-209ENST00000477552 FAM208AQ9UK61 1670 aaKnown RBP10.32□□□□□ -0.76
PTPRD-209ENST00000477552 CEP170BQ9Y4F5 1589 aaPredicted RBP10.32□□□□□ -0.76
PTPRD-209ENST00000477552 MAP3K5Q99683 1374 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 GOLGA6L3A6NEY3 463 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 SLC4A2P04920 1241 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 MCCP23508 829 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 DDIT3P35638 169 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 HSP90AB4PQ58FF6 505 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 HSP90AB2PQ58FF8 381 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 CEP85Q6P2H3 762 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 SIRT2Q8IXJ6 389 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 KLHL34Q8N239 644 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
PTPRD-209ENST00000477552 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
PTPRD-209ENST00000477552 IBTKQ9P2D0 1353 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-209ENST00000477552 ELL2O00472 640 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-209ENST00000477552 MRE11P49959 708 aa10.31□□□□□ -0.76
PTPRD-209ENST00000477552 ANAPC15P60006 121 aa10.31□□□□□ -0.76
PTPRD-209ENST00000477552 TAF7Q15545 349 aaPredicted RBP10.31□□□□□ -0.76
PTPRD-209ENST00000477552 RAB11FIP3O75154 756 aa10.3□□□□□ -0.76
PTPRD-209ENST00000477552 NLRP6P59044 892 aa10.3□□□□□ -0.76
PTPRD-209ENST00000477552 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
PTPRD-209ENST00000477552 AMOTQ4VCS5 1084 aa10.3□□□□□ -0.76
PTPRD-209ENST00000477552 ANKLE2Q86XL3 938 aa10.3□□□□□ -0.76
PTPRD-209ENST00000477552 FAM43AQ8N2R8 423 aa10.3□□□□□ -0.76
PTPRD-209ENST00000477552 FAM83GA6ND36 823 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 ERC2O15083 957 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 TRAK2O60296 914 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 HOXC9P31274 260 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 MTHFSDQ2M296 383 aaKnown RBP10.29□□□□□ -0.76
PTPRD-209ENST00000477552 MCM10Q7L590 875 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 AEBP1Q8IUX7 1158 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 SLC26A8Q96RN1 970 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 EYA1Q99502 592 aa10.29□□□□□ -0.76
PTPRD-209ENST00000477552 MARF1Q9Y4F3 1742 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms