RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 RGS3P49796 1198 aa5.76□□□□□ -1.49
RGPD5-209ENST00000477523 TAF7Q15545 349 aaPredicted RBP5.76□□□□□ -1.49
RGPD5-209ENST00000477523 EIF2S2P20042 333 aaKnown RBP5.76□□□□□ -1.49
RGPD5-209ENST00000477523 ERBB3P21860 1342 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 TNS3Q68CZ2 1445 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 AKAP4Q5JQC9 854 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 CENPQQ7L2Z9 268 aaPredicted RBP5.75□□□□□ -1.49
RGPD5-209ENST00000477523 MIS18AQ9NYP9 233 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 MAP3K5Q99683 1374 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 FKBP5Q13451 457 aaPredicted RBP5.75□□□□□ -1.49
RGPD5-209ENST00000477523 CCDC30Q5VVM6 783 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 SLC4A10Q6U841 1118 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 MPRIPQ6WCQ1 1025 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 NOB1Q9ULX3 412 aaKnown RBP5.75□□□□□ -1.49
RGPD5-209ENST00000477523 USP19O94966 1318 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 NUTM2BA6NNL0 878 aaPredicted RBP5.75□□□□□ -1.49
RGPD5-209ENST00000477523 NUTM2EB1AL46 878 aaPredicted RBP5.75□□□□□ -1.49
RGPD5-209ENST00000477523 NUTM2AQ8IVF1 878 aaPredicted RBP5.75□□□□□ -1.49
RGPD5-209ENST00000477523 IFNL2Q8IZJ0 200 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 HDGFL1Q5TGJ6 251 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 SLC4A2P04920 1241 aa5.75□□□□□ -1.49
RGPD5-209ENST00000477523 CHL1O00533 1208 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 ERICH6Q7L0X2 663 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 NECTIN2Q92692 538 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 KIAA0232Q92628 1395 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 MVPQ14764 893 aaKnown RBP5.74□□□□□ -1.49
RGPD5-209ENST00000477523 COL3A1P02461 1466 aaPredicted RBP5.74□□□□□ -1.49
RGPD5-209ENST00000477523 C8orf58Q8NAV2 365 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 BTBD11A6QL63 1104 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 VAMP4O75379 141 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 KNDC1Q76NI1 1749 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 ADAMTS2O95450 1211 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 TSPYL6Q8N831 410 aa5.74□□□□□ -1.49
RGPD5-209ENST00000477523 DDX54Q8TDD1 881 aaKnown RBP5.73□□□□□ -1.49
RGPD5-209ENST00000477523 XRN1Q8IZH2 1706 aaKnown RBP5.73□□□□□ -1.49
RGPD5-209ENST00000477523 ZNF142P52746 1687 aaPredicted RBP5.73□□□□□ -1.49
RGPD5-209ENST00000477523 TRIM27P14373 513 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 ARHGAP45Q92619 1136 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 ZNF853P0CG23 659 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 CABP4P57796 275 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 BABAM1Q9NWV8 329 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 DAXXQ9UER7 740 aaPredicted RBP5.73□□□□□ -1.49
RGPD5-209ENST00000477523 AXIN2Q9Y2T1 843 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 KDRP35968 1356 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.73□□□□□ -1.49
RGPD5-209ENST00000477523 LRRC7Q96NW7 1537 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 HDAC5Q9UQL6 1122 aa5.73□□□□□ -1.49
RGPD5-209ENST00000477523 SOS2Q07890 1332 aaPredicted RBP5.72□□□□□ -1.49
RGPD5-209ENST00000477523 HMMRO75330 724 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 ARXQ96QS3 562 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 IL2RBP14784 551 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 IQSEC2Q5JU85 1478 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 ANP32AP39687 249 aaKnown RBP5.72□□□□□ -1.49
RGPD5-209ENST00000477523 KRT24Q2M2I5 525 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 TMEM57Q8N5G2 664 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 IL17REQ8NFR9 667 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
RGPD5-209ENST00000477523 DCAF5Q96JK2 942 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 BTG4Q9NY30 223 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 WDR17Q8IZU2 1322 aa5.72□□□□□ -1.49
RGPD5-209ENST00000477523 RNMTO43148 476 aaKnown RBP5.71□□□□□ -1.49
RGPD5-209ENST00000477523 DDX58O95786 925 aaKnown RBP5.71□□□□□ -1.49
RGPD5-209ENST00000477523 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.71□□□□□ -1.49
RGPD5-209ENST00000477523 MRPL50Q8N5N7 158 aaKnown RBP5.71□□□□□ -1.49
RGPD5-209ENST00000477523 ZNF330Q9Y3S2 320 aaPredicted RBP5.71□□□□□ -1.49
RGPD5-209ENST00000477523 MEX3CQ5U5Q3 659 aaKnown RBP5.71□□□□□ -1.5
RGPD5-209ENST00000477523 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
RGPD5-209ENST00000477523 UPF2Q9HAU5 1272 aaKnown RBP5.71□□□□□ -1.5
RGPD5-209ENST00000477523 SETD1AO15047 1707 aaKnown RBP5.71□□□□□ -1.5
RGPD5-209ENST00000477523 SOS1Q07889 1333 aaPredicted RBP5.71□□□□□ -1.5
RGPD5-209ENST00000477523 LGR6Q9HBX8 967 aa5.71□□□□□ -1.5
RGPD5-209ENST00000477523 NEXNQ0ZGT2 675 aa5.71□□□□□ -1.5
RGPD5-209ENST00000477523 PCDH11XQ9BZA7 1347 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 PCDH11YQ9BZA8 1340 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 GNAI3P08754 354 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 RLBP1P12271 317 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 CCT4P50991 539 aaKnown RBP5.7□□□□□ -1.5
RGPD5-209ENST00000477523 TNNQ9UQP3 1299 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 FLIIQ13045 1269 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 NGLY1Q96IV0 654 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 EXOC5O00471 708 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 HOXB7P09629 217 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 SRCIN1Q9C0H9 1055 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 TSHZ2Q9NRE2 1034 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 PTPRCP08575 1304 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 DBF4Q9UBU7 674 aaPredicted RBP5.7□□□□□ -1.5
RGPD5-209ENST00000477523 NWD1Q149M9 1564 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 FMNL2Q96PY5 1086 aa5.7□□□□□ -1.5
RGPD5-209ENST00000477523 LARP1Q6PKG0 1096 aaKnown RBP5.69□□□□□ -1.5
RGPD5-209ENST00000477523 TMOD3Q9NYL9 352 aa5.69□□□□□ -1.5
RGPD5-209ENST00000477523 APBB1O00213 710 aa5.69□□□□□ -1.5
RGPD5-209ENST00000477523 PHKG2P15735 406 aa5.69□□□□□ -1.5
RGPD5-209ENST00000477523 AIMP1Q12904 312 aaKnown RBP5.69□□□□□ -1.5
RGPD5-209ENST00000477523 CARD10Q9BWT7 1032 aa5.69□□□□□ -1.5
RGPD5-209ENST00000477523 OS9Q13438 667 aaPredicted RBP5.69□□□□□ -1.5
RGPD5-209ENST00000477523 CPDO75976 1380 aa5.69□□□□□ -1.5
RGPD5-209ENST00000477523 SLC39A6Q13433 755 aa5.69□□□□□ -1.5
RGPD5-209ENST00000477523 RBM42Q9BTD8 480 aaKnown RBP5.69□□□□□ -1.5
RGPD5-209ENST00000477523 UBTFL1P0CB47 393 aaPredicted RBP5.68□□□□□ -1.5
RGPD5-209ENST00000477523 NFATC2IPQ8NCF5 419 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms