RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 USP4Q13107 963 aa6.42□□□□□ -1.38
TARDBP-208ENST00000477447 CBLBQ13191 982 aa6.42□□□□□ -1.38
TARDBP-208ENST00000477447 TRIM50Q86XT4 487 aa6.42□□□□□ -1.38
TARDBP-208ENST00000477447 VRTNQ9H8Y1 702 aa6.42□□□□□ -1.38
TARDBP-208ENST00000477447 KANK4Q5T7N3 995 aaPredicted RBP6.41□□□□□ -1.38
TARDBP-208ENST00000477447 KLF16Q9BXK1 252 aaPredicted RBP6.41□□□□□ -1.38
TARDBP-208ENST00000477447 IRX2Q9BZI1 471 aaPredicted RBP6.41□□□□□ -1.38
TARDBP-208ENST00000477447 OSBPL3Q9H4L5 887 aa6.41□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L15C9J2P7 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L10C9JJH3 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L13C9JLJ4 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L12C9JPN9 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L11C9JVI0 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L21D6R901 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L18D6R9N7 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L22D6RA61 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L17D6RBQ6 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L19D6RCP7 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L20D6RJB6 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 CAPN5O15484 640 aaPredicted RBP6.4□□□□□ -1.38
TARDBP-208ENST00000477447 DGAT1O75907 488 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 ADH1AP07327 375 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 RASA1P20936 1047 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 ADD1P35611 737 aaKnown RBP6.4□□□□□ -1.38
TARDBP-208ENST00000477447 ATP1A2P50993 1020 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 CLDN10P78369 228 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 USP17L24Q0WX57 530 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 LAPTM4AQ15012 233 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 CRTC2Q53ET0 693 aaPredicted RBP6.4□□□□□ -1.38
TARDBP-208ENST00000477447 LARP1Q6PKG0 1096 aaKnown RBP6.4□□□□□ -1.38
TARDBP-208ENST00000477447 CYP2U1Q7Z449 544 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 OGFOD1Q8N543 542 aa6.4□□□□□ -1.38
TARDBP-208ENST00000477447 ZNF594Q96JF6 807 aaPredicted RBP6.4□□□□□ -1.38
TARDBP-208ENST00000477447 PPP1R15AO75807 674 aaPredicted RBP6.39□□□□□ -1.39
TARDBP-208ENST00000477447 SRPK2P78362 688 aaKnown RBP6.39□□□□□ -1.39
TARDBP-208ENST00000477447 MEIOBQ8N635 442 aa6.39□□□□□ -1.39
TARDBP-208ENST00000477447 DNAAF2Q9NVR5 837 aaKnown RBP6.39□□□□□ -1.39
TARDBP-208ENST00000477447 KIAA1024Q9UPX6 916 aa6.39□□□□□ -1.39
TARDBP-208ENST00000477447 FAM196BA6NMK8 535 aa6.38□□□□□ -1.39
TARDBP-208ENST00000477447 AVPP01185 164 aa6.38□□□□□ -1.39
TARDBP-208ENST00000477447 RELBQ01201 579 aa6.38□□□□□ -1.39
TARDBP-208ENST00000477447 Q6ZVU0 165 aa6.38□□□□□ -1.39
TARDBP-208ENST00000477447 AGBL1Q96MI9 1066 aa6.38□□□□□ -1.39
TARDBP-208ENST00000477447 RAB6BQ9NRW1 208 aa6.38□□□□□ -1.39
TARDBP-208ENST00000477447 PCDHGA11Q9Y5H2 935 aa6.38□□□□□ -1.39
TARDBP-208ENST00000477447 ATG7O95352 703 aa6.37□□□□□ -1.39
TARDBP-208ENST00000477447 STAU1O95793 577 aaKnown RBP6.37□□□□□ -1.39
TARDBP-208ENST00000477447 PTK7Q13308 1070 aa6.37□□□□□ -1.39
TARDBP-208ENST00000477447 CTC1Q2NKJ3 1217 aa6.37□□□□□ -1.39
TARDBP-208ENST00000477447 TPCN2Q8NHX9 752 aa6.37□□□□□ -1.39
TARDBP-208ENST00000477447 ARHGEF10LQ9HCE6 1279 aa6.37□□□□□ -1.39
TARDBP-208ENST00000477447 NOVA2Q9UNW9 492 aaKnown RBP6.37□□□□□ -1.39
TARDBP-208ENST00000477447 AXIN1O15169 862 aa6.36□□□□□ -1.39
TARDBP-208ENST00000477447 ST8SIA5O15466 376 aa6.36□□□□□ -1.39
TARDBP-208ENST00000477447 BMP1P13497 986 aa6.36□□□□□ -1.39
TARDBP-208ENST00000477447 CCDC102BQ68D86 513 aa6.36□□□□□ -1.39
TARDBP-208ENST00000477447 SIX5Q8N196 739 aa6.36□□□□□ -1.39
TARDBP-208ENST00000477447 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
TARDBP-208ENST00000477447 LARGE2Q8N3Y3 721 aa6.36□□□□□ -1.39
TARDBP-208ENST00000477447 RBM19Q9Y4C8 960 aaKnown RBP6.36□□□□□ -1.39
TARDBP-208ENST00000477447 ACIN1Q9UKV3 1341 aaKnown RBP6.35□□□□□ -1.39
TARDBP-208ENST00000477447 UPP2O95045 317 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 GNRH1P01148 92 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 PTGIRP43119 386 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 SMCPP49901 116 aaPredicted RBP6.35□□□□□ -1.39
TARDBP-208ENST00000477447 SCNN1DP51172 638 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 GDF10P55107 478 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 DPYDQ12882 1025 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 C6orf118Q5T5N4 469 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 ANKMY2Q8IV38 441 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 STK32AQ8WU08 396 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 TSEN34Q9BSV6 310 aaKnown RBP6.35□□□□□ -1.39
TARDBP-208ENST00000477447 ZNF395Q9H8N7 513 aaPredicted RBP6.35□□□□□ -1.39
TARDBP-208ENST00000477447 ETNK1Q9HBU6 452 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 ZMIZ1Q9ULJ6 1067 aa6.35□□□□□ -1.39
TARDBP-208ENST00000477447 SFI1A8K8P3 1242 aa6.34□□□□□ -1.39
TARDBP-208ENST00000477447 MEN1O00255 615 aa6.34□□□□□ -1.39
TARDBP-208ENST00000477447 ZBTB7BO15156 539 aaPredicted RBP6.34□□□□□ -1.39
TARDBP-208ENST00000477447 CSB-PGBD3P0DP91 1061 aa6.34□□□□□ -1.39
TARDBP-208ENST00000477447 BMP2P12643 396 aa6.34□□□□□ -1.39
TARDBP-208ENST00000477447 ESCO1Q5FWF5 840 aa6.34□□□□□ -1.39
TARDBP-208ENST00000477447 MRPL14Q6P1L8 145 aaKnown RBP6.34□□□□□ -1.39
TARDBP-208ENST00000477447 CRIPAKQ8N1N5 446 aa6.34□□□□□ -1.39
TARDBP-208ENST00000477447 KDF1Q8NAX2 398 aaPredicted RBP6.34□□□□□ -1.39
TARDBP-208ENST00000477447 RETREG2Q8NC44 543 aa6.34□□□□□ -1.39
TARDBP-208ENST00000477447 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.34□□□□□ -1.39
TARDBP-208ENST00000477447 A0A1W2PRU2 124 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 IL2RAP01589 272 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 SEC13P55735 322 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 ELOAQ14241 798 aaKnown RBP6.33□□□□□ -1.4
TARDBP-208ENST00000477447 Q6ZNB5 142 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 FAM200AQ8TCP9 573 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 PURBQ96QR8 312 aaKnown RBP6.33□□□□□ -1.4
TARDBP-208ENST00000477447 ARXQ96QS3 562 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 POLMQ9NP87 494 aaPredicted RBP6.33□□□□□ -1.4
TARDBP-208ENST00000477447 AAASQ9NRG9 546 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 ZNF358Q9NW07 568 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 SERTAD1Q9UHV2 236 aa6.33□□□□□ -1.4
TARDBP-208ENST00000477447 DKK1O94907 266 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms