RNA–Protein interactions for RNA: ENST00000477424.2

C4A-253, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-253ENST00000477424 PER1O15534 1290 aaPredicted RBP24.46■■□□□ 1.51
C4A-253ENST00000477424 PARD3Q8TEW0 1356 aa24.44■■□□□ 1.5
C4A-253ENST00000477424 MORC1Q86VD1 984 aa24.44■■□□□ 1.5
C4A-253ENST00000477424 BCL11BQ9C0K0 894 aaPredicted RBP24.43■■□□□ 1.5
C4A-253ENST00000477424 KCNQ2O43526 872 aa24.42■■□□□ 1.5
C4A-253ENST00000477424 DDX54Q8TDD1 881 aaKnown RBP24.41■■□□□ 1.5
C4A-253ENST00000477424 ACSBG1Q96GR2 724 aa24.41■■□□□ 1.5
C4A-253ENST00000477424 EIF4A2Q14240 407 aaKnown RBP24.4■■□□□ 1.5
C4A-253ENST00000477424 ZCRB1Q8TBF4 217 aaKnown RBP24.4■■□□□ 1.5
C4A-253ENST00000477424 EYA1Q99502 592 aa24.4■■□□□ 1.5
C4A-253ENST00000477424 TOGARAM1Q9Y4F4 1720 aa24.39■■□□□ 1.5
C4A-253ENST00000477424 RAPGEF4Q8WZA2 1011 aa24.39■■□□□ 1.49
C4A-253ENST00000477424 PSDA5PKW4 1024 aaPredicted RBP24.37■■□□□ 1.49
C4A-253ENST00000477424 CC2D1BQ5T0F9 858 aaKnown RBP24.37■■□□□ 1.49
C4A-253ENST00000477424 TATP17735 454 aaPredicted RBP24.36■■□□□ 1.49
C4A-253ENST00000477424 NPC1L1Q9UHC9 1359 aa24.35■■□□□ 1.49
C4A-253ENST00000477424 PLSCR1O15162 318 aa24.35■■□□□ 1.49
C4A-253ENST00000477424 ITGB4P16144 1822 aa24.34■■□□□ 1.49
C4A-253ENST00000477424 IGSF1Q8N6C5 1336 aa24.34■■□□□ 1.49
C4A-253ENST00000477424 R3HDM1Q15032 1099 aaKnown RBP24.32■■□□□ 1.48
C4A-253ENST00000477424 PROM2Q8N271 834 aa24.32■■□□□ 1.48
C4A-253ENST00000477424 LY75O60449 1722 aa24.32■■□□□ 1.48
C4A-253ENST00000477424 PCDH11XQ9BZA7 1347 aa24.32■■□□□ 1.48
C4A-253ENST00000477424 PCDH11YQ9BZA8 1340 aa24.32■■□□□ 1.48
C4A-253ENST00000477424 CNGB1Q14028 1251 aaPredicted RBP24.31■■□□□ 1.48
C4A-253ENST00000477424 PAPPAQ13219 1627 aa24.31■■□□□ 1.48
C4A-253ENST00000477424 SRCAPQ6ZRS2 3230 aa24.31■■□□□ 1.48
C4A-253ENST00000477424 CYP27B1O15528 508 aa24.3■■□□□ 1.48
C4A-253ENST00000477424 LRP5O75197 1615 aa24.3■■□□□ 1.48
C4A-253ENST00000477424 MTHFSP49914 203 aa24.28■■□□□ 1.48
C4A-253ENST00000477424 COL3A1P02461 1466 aaPredicted RBP24.27■■□□□ 1.48
C4A-253ENST00000477424 PRIM1P49642 420 aaKnown RBP24.27■■□□□ 1.48
C4A-253ENST00000477424 TXNRD1Q16881 649 aa24.27■■□□□ 1.48
C4A-253ENST00000477424 ANO8Q9HCE9 1232 aaPredicted RBP24.27■■□□□ 1.48
C4A-253ENST00000477424 AEBP1Q8IUX7 1158 aa24.26■■□□□ 1.47
C4A-253ENST00000477424 CASZ1Q86V15 1759 aa24.25■■□□□ 1.47
C4A-253ENST00000477424 IL13P35225 146 aa24.25■■□□□ 1.47
C4A-253ENST00000477424 SYTL4Q96C24 671 aaPredicted RBP24.25■■□□□ 1.47
C4A-253ENST00000477424 PLEKHG2Q9H7P9 1386 aa24.23■■□□□ 1.47
C4A-253ENST00000477424 KDRP35968 1356 aa24.22■■□□□ 1.47
C4A-253ENST00000477424 SPG7Q9UQ90 795 aa24.22■■□□□ 1.47
C4A-253ENST00000477424 TUBGCP6Q96RT7 1819 aa24.21■■□□□ 1.47
C4A-253ENST00000477424 NBPF14Q5TI25 921 aa24.21■■□□□ 1.47
C4A-253ENST00000477424 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.21■■□□□ 1.47
C4A-253ENST00000477424 VIRMAQ69YN4 1812 aaKnown RBP24.21■■□□□ 1.47
C4A-253ENST00000477424 NKX1-1Q15270 411 aaPredicted RBP24.19■■□□□ 1.46
C4A-253ENST00000477424 LRRC4BQ9NT99 713 aa24.19■■□□□ 1.46
C4A-253ENST00000477424 PHKG2P15735 406 aa24.18■■□□□ 1.46
C4A-253ENST00000477424 SULT6B1Q6IMI4 303 aa24.18■■□□□ 1.46
C4A-253ENST00000477424 TAF1LQ8IZX4 1826 aa24.18■■□□□ 1.46
C4A-253ENST00000477424 QSER1Q2KHR3 1735 aa24.16■■□□□ 1.46
C4A-253ENST00000477424 C5P01031 1676 aa24.16■■□□□ 1.46
C4A-253ENST00000477424 KCNQ4P56696 695 aa24.15■■□□□ 1.46
C4A-253ENST00000477424 IFNL2Q8IZJ0 200 aa24.15■■□□□ 1.46
C4A-253ENST00000477424 SCN11AQ9UI33 1791 aa24.15■■□□□ 1.46
C4A-253ENST00000477424 KDM6AO15550 1401 aaPredicted RBP24.14■■□□□ 1.45
C4A-253ENST00000477424 DIAPH1O60610 1272 aaKnown RBP24.14■■□□□ 1.45
C4A-253ENST00000477424 PDGFDQ9GZP0 370 aaPredicted RBP24.14■■□□□ 1.45
C4A-253ENST00000477424 MPRIPQ6WCQ1 1025 aa24.13■■□□□ 1.45
C4A-253ENST00000477424 HMOX1P09601 288 aa24.12■■□□□ 1.45
C4A-253ENST00000477424 ZNF827Q17R98 1081 aa24.12■■□□□ 1.45
C4A-253ENST00000477424 PLEKHO1Q53GL0 409 aaPredicted RBP24.12■■□□□ 1.45
C4A-253ENST00000477424 PPP2R1AP30153 589 aa24.11■■□□□ 1.45
C4A-253ENST00000477424 SLC15A2Q16348 729 aa24.11■■□□□ 1.45
C4A-253ENST00000477424 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
C4A-253ENST00000477424 STK32BQ9NY57 414 aa24.11■■□□□ 1.45
C4A-253ENST00000477424 SLC27A3Q5K4L6 730 aa24.1■■□□□ 1.45
C4A-253ENST00000477424 PIGBQ92521 554 aa24.1■■□□□ 1.45
C4A-253ENST00000477424 PALLDQ8WX93 1383 aa24.1■■□□□ 1.45
C4A-253ENST00000477424 AMOTQ4VCS5 1084 aa24.09■■□□□ 1.45
C4A-253ENST00000477424 AKT1S1Q96B36 256 aa24.07■■□□□ 1.44
C4A-253ENST00000477424 CCNL1Q9UK58 526 aaPredicted RBP24.07■■□□□ 1.44
C4A-253ENST00000477424 ADAMTS7Q9UKP4 1686 aa24.07■■□□□ 1.44
C4A-253ENST00000477424 C4BP0C0L5 1744 aa24.05■■□□□ 1.44
C4A-253ENST00000477424 TMOD3Q9NYL9 352 aa24.05■■□□□ 1.44
C4A-253ENST00000477424 U2SURPO15042 1029 aaKnown RBP24.04■■□□□ 1.44
C4A-253ENST00000477424 DDX10Q13206 875 aaKnown RBP24.04■■□□□ 1.44
C4A-253ENST00000477424 DCAF5Q96JK2 942 aa24.04■■□□□ 1.44
C4A-253ENST00000477424 C1orf141Q5JVX7 400 aa24.03■■□□□ 1.44
C4A-253ENST00000477424 HSP90AB1P08238 724 aaKnown RBP24.02■■□□□ 1.44
C4A-253ENST00000477424 CFAP53Q96M91 514 aa24.02■■□□□ 1.44
C4A-253ENST00000477424 ASAP1Q9ULH1 1129 aa24.02■■□□□ 1.44
C4A-253ENST00000477424 UBR3Q6ZT12 1888 aa24.02■■□□□ 1.44
C4A-253ENST00000477424 ERVV-2B6SEH9 535 aa24.01■■□□□ 1.43
C4A-253ENST00000477424 SMARCC1Q92922 1105 aaPredicted RBP24.01■■□□□ 1.43
C4A-253ENST00000477424 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
C4A-253ENST00000477424 COL24A1Q17RW2 1714 aa24.01■■□□□ 1.43
C4A-253ENST00000477424 MRC1P22897 1456 aa24■■□□□ 1.43
C4A-253ENST00000477424 ZBTB7AO95365 584 aa24■■□□□ 1.43
C4A-253ENST00000477424 ZEB1P37275 1124 aaPredicted RBP24■■□□□ 1.43
C4A-253ENST00000477424 MTHFSDQ2M296 383 aaKnown RBP24■■□□□ 1.43
C4A-253ENST00000477424 ATG3Q9NT62 314 aa24■■□□□ 1.43
C4A-253ENST00000477424 COL5A3P25940 1745 aaPredicted RBP24■■□□□ 1.43
C4A-253ENST00000477424 SPON1Q9HCB6 807 aa23.99■■□□□ 1.43
C4A-253ENST00000477424 PNPLA7Q6ZV29 1317 aa23.99■■□□□ 1.43
C4A-253ENST00000477424 AKAP4Q5JQC9 854 aa23.98■■□□□ 1.43
C4A-253ENST00000477424 RSPH6AQ9H0K4 717 aa23.97■■□□□ 1.43
C4A-253ENST00000477424 SIPA1L3O60292 1781 aaPredicted RBP23.96■■□□□ 1.43
C4A-253ENST00000477424 LOC102724428A0A0B4J2F2 783 aa23.96■■□□□ 1.43
C4A-253ENST00000477424 SIK1P57059 783 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms