RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 PROM2Q8N271 834 aa31.2■■■□□ 2.59
CNIH4-208ENST00000477413 PANK3Q9H999 370 aa31.2■■■□□ 2.59
CNIH4-208ENST00000477413 POLR3GLQ9BT43 218 aa31.19■■■□□ 2.58
CNIH4-208ENST00000477413 CASZ1Q86V15 1759 aa31.19■■■□□ 2.58
CNIH4-208ENST00000477413 ZCRB1Q8TBF4 217 aaKnown RBP31.16■■■□□ 2.58
CNIH4-208ENST00000477413 POLKQ9UBT6 870 aa31.16■■■□□ 2.58
CNIH4-208ENST00000477413 PLEKHG2Q9H7P9 1386 aa31.16■■■□□ 2.58
CNIH4-208ENST00000477413 KIF7Q2M1P5 1343 aa31.15■■■□□ 2.58
CNIH4-208ENST00000477413 TXNRD1Q16881 649 aa31.14■■■□□ 2.58
CNIH4-208ENST00000477413 ANO8Q9HCE9 1232 aaPredicted RBP31.14■■■□□ 2.58
CNIH4-208ENST00000477413 KAT6BQ8WYB5 2073 aa31.13■■■□□ 2.57
CNIH4-208ENST00000477413 RAPGEF4Q8WZA2 1011 aa31.13■■■□□ 2.57
CNIH4-208ENST00000477413 ACSBG1Q96GR2 724 aa31.13■■■□□ 2.57
CNIH4-208ENST00000477413 USHBP1Q8N6Y0 703 aa31.12■■■□□ 2.57
CNIH4-208ENST00000477413 LY75O60449 1722 aa31.12■■■□□ 2.57
CNIH4-208ENST00000477413 DDX54Q8TDD1 881 aaKnown RBP31.11■■■□□ 2.57
CNIH4-208ENST00000477413 TATP17735 454 aaPredicted RBP31.09■■■□□ 2.57
CNIH4-208ENST00000477413 PCDH11XQ9BZA7 1347 aa31.08■■■□□ 2.57
CNIH4-208ENST00000477413 PCDH11YQ9BZA8 1340 aa31.08■■■□□ 2.57
CNIH4-208ENST00000477413 QSER1Q2KHR3 1735 aa31.06■■■□□ 2.56
CNIH4-208ENST00000477413 TOGARAM1Q9Y4F4 1720 aa31.06■■■□□ 2.56
CNIH4-208ENST00000477413 PPM1GO15355 546 aaPredicted RBP31.04■■■□□ 2.56
CNIH4-208ENST00000477413 AMER1Q5JTC6 1135 aaPredicted RBP31.04■■■□□ 2.56
CNIH4-208ENST00000477413 EYA1Q99502 592 aa31.03■■■□□ 2.56
CNIH4-208ENST00000477413 KNSTRNQ9Y448 316 aa31.03■■■□□ 2.56
CNIH4-208ENST00000477413 EIF4A2Q14240 407 aaKnown RBP31.01■■■□□ 2.55
CNIH4-208ENST00000477413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.55
CNIH4-208ENST00000477413 IGSF1Q8N6C5 1336 aa31■■■□□ 2.55
CNIH4-208ENST00000477413 PRIM1P49642 420 aaKnown RBP31■■■□□ 2.55
CNIH4-208ENST00000477413 SLC27A3Q5K4L6 730 aa31■■■□□ 2.55
CNIH4-208ENST00000477413 ITGB4P16144 1822 aa30.99■■■□□ 2.55
CNIH4-208ENST00000477413 CYP27B1O15528 508 aa30.99■■■□□ 2.55
CNIH4-208ENST00000477413 SLC15A2Q16348 729 aa30.99■■■□□ 2.55
CNIH4-208ENST00000477413 PER1O15534 1290 aaPredicted RBP30.98■■■□□ 2.55
CNIH4-208ENST00000477413 TNNT2P45379 298 aaPredicted RBP30.98■■■□□ 2.55
CNIH4-208ENST00000477413 STK32BQ9NY57 414 aa30.98■■■□□ 2.55
CNIH4-208ENST00000477413 MORC1Q86VD1 984 aa30.97■■■□□ 2.55
CNIH4-208ENST00000477413 LRRC4BQ9NT99 713 aa30.97■■■□□ 2.55
CNIH4-208ENST00000477413 NPC1L1Q9UHC9 1359 aa30.96■■■□□ 2.55
CNIH4-208ENST00000477413 NKX1-1Q15270 411 aaPredicted RBP30.96■■■□□ 2.55
CNIH4-208ENST00000477413 SPON1Q9HCB6 807 aa30.95■■■□□ 2.55
CNIH4-208ENST00000477413 SYTL4Q96C24 671 aaPredicted RBP30.93■■■□□ 2.54
CNIH4-208ENST00000477413 SPG7Q9UQ90 795 aa30.93■■■□□ 2.54
CNIH4-208ENST00000477413 TUBGCP6Q96RT7 1819 aa30.93■■■□□ 2.54
CNIH4-208ENST00000477413 COL24A1Q17RW2 1714 aa30.9■■■□□ 2.54
CNIH4-208ENST00000477413 AKT1S1Q96B36 256 aa30.89■■■□□ 2.54
CNIH4-208ENST00000477413 PDGFDQ9GZP0 370 aaPredicted RBP30.89■■■□□ 2.54
CNIH4-208ENST00000477413 C5P01031 1676 aa30.89■■■□□ 2.54
CNIH4-208ENST00000477413 KDRP35968 1356 aa30.89■■■□□ 2.54
CNIH4-208ENST00000477413 ZNF827Q17R98 1081 aa30.88■■■□□ 2.53
CNIH4-208ENST00000477413 TAF1LQ8IZX4 1826 aa30.88■■■□□ 2.53
CNIH4-208ENST00000477413 PHKG2P15735 406 aa30.83■■■□□ 2.53
CNIH4-208ENST00000477413 PALLDQ8WX93 1383 aa30.82■■■□□ 2.52
CNIH4-208ENST00000477413 PTGER2P43116 358 aa30.82■■■□□ 2.52
CNIH4-208ENST00000477413 IFNL2Q8IZJ0 200 aa30.82■■■□□ 2.52
CNIH4-208ENST00000477413 MTFR1LQ9H019 292 aa30.82■■■□□ 2.52
CNIH4-208ENST00000477413 IL13P35225 146 aa30.81■■■□□ 2.52
CNIH4-208ENST00000477413 HMGB2P26583 209 aaKnown RBP30.8■■■□□ 2.52
CNIH4-208ENST00000477413 SGIP1Q9BQI5 828 aa30.8■■■□□ 2.52
CNIH4-208ENST00000477413 CCNL1Q9UK58 526 aaPredicted RBP30.8■■■□□ 2.52
CNIH4-208ENST00000477413 ZNF831Q5JPB2 1677 aa30.78■■■□□ 2.52
CNIH4-208ENST00000477413 ZBTB7AO95365 584 aa30.78■■■□□ 2.52
CNIH4-208ENST00000477413 SMARCC1Q92922 1105 aaPredicted RBP30.78■■■□□ 2.52
CNIH4-208ENST00000477413 PNPLA7Q6ZV29 1317 aa30.77■■■□□ 2.52
CNIH4-208ENST00000477413 COL3A1P02461 1466 aaPredicted RBP30.77■■■□□ 2.52
CNIH4-208ENST00000477413 MPRIPQ6WCQ1 1025 aa30.77■■■□□ 2.52
CNIH4-208ENST00000477413 AMOTQ4VCS5 1084 aa30.76■■■□□ 2.51
CNIH4-208ENST00000477413 SLC16A10Q8TF71 515 aa30.76■■■□□ 2.51
CNIH4-208ENST00000477413 PIGBQ92521 554 aa30.76■■■□□ 2.51
CNIH4-208ENST00000477413 C4BP0C0L5 1744 aa30.76■■■□□ 2.51
CNIH4-208ENST00000477413 MTHFSP49914 203 aa30.75■■■□□ 2.51
CNIH4-208ENST00000477413 KCNQ4P56696 695 aa30.74■■■□□ 2.51
CNIH4-208ENST00000477413 AEBP1Q8IUX7 1158 aa30.74■■■□□ 2.51
CNIH4-208ENST00000477413 PPP1R1BQ9UD71 204 aaPredicted RBP30.74■■■□□ 2.51
CNIH4-208ENST00000477413 KDM6AO15550 1401 aaPredicted RBP30.73■■■□□ 2.51
CNIH4-208ENST00000477413 PLEKHO1Q53GL0 409 aaPredicted RBP30.73■■■□□ 2.51
CNIH4-208ENST00000477413 HSP90AB1P08238 724 aaKnown RBP30.72■■■□□ 2.51
CNIH4-208ENST00000477413 CC2D1BQ5T0F9 858 aaKnown RBP30.72■■■□□ 2.51
CNIH4-208ENST00000477413 DCAF5Q96JK2 942 aa30.71■■■□□ 2.51
CNIH4-208ENST00000477413 TMOD3Q9NYL9 352 aa30.71■■■□□ 2.51
CNIH4-208ENST00000477413 UBR3Q6ZT12 1888 aa30.71■■■□□ 2.51
CNIH4-208ENST00000477413 MAP3K5Q99683 1374 aa30.7■■■□□ 2.51
CNIH4-208ENST00000477413 SCN11AQ9UI33 1791 aa30.7■■■□□ 2.51
CNIH4-208ENST00000477413 ERVV-2B6SEH9 535 aa30.7■■■□□ 2.51
CNIH4-208ENST00000477413 SULT6B1Q6IMI4 303 aa30.7■■■□□ 2.51
CNIH4-208ENST00000477413 TFCP2L1Q9NZI6 479 aa30.7■■■□□ 2.51
CNIH4-208ENST00000477413 ATF5Q9Y2D1 282 aaPredicted RBP30.69■■■□□ 2.5
CNIH4-208ENST00000477413 ADAMTS7Q9UKP4 1686 aa30.68■■■□□ 2.5
CNIH4-208ENST00000477413 CICQ96RK0 1608 aaPredicted RBP30.67■■■□□ 2.5
CNIH4-208ENST00000477413 ZNF530Q6P9A1 599 aaPredicted RBP30.67■■■□□ 2.5
CNIH4-208ENST00000477413 MRC1P22897 1456 aa30.64■■■□□ 2.5
CNIH4-208ENST00000477413 LOC102724428A0A0B4J2F2 783 aa30.64■■■□□ 2.5
CNIH4-208ENST00000477413 SIK1P57059 783 aa30.64■■■□□ 2.5
CNIH4-208ENST00000477413 VIRMAQ69YN4 1812 aaKnown RBP30.63■■■□□ 2.49
CNIH4-208ENST00000477413 DIAPH1O60610 1272 aaKnown RBP30.63■■■□□ 2.49
CNIH4-208ENST00000477413 ASAP1Q9ULH1 1129 aa30.63■■■□□ 2.49
CNIH4-208ENST00000477413 COL5A3P25940 1745 aaPredicted RBP30.63■■■□□ 2.49
CNIH4-208ENST00000477413 ATG3Q9NT62 314 aa30.61■■■□□ 2.49
CNIH4-208ENST00000477413 C1orf141Q5JVX7 400 aa30.6■■■□□ 2.49
CNIH4-208ENST00000477413 FLAD1Q8NFF5 587 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms