RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 DACH1Q9UI36 760 aa21.93■■□□□ 1.1
VARS2-209ENST00000477288 NEBLO76041 1014 aa21.92■■□□□ 1.1
VARS2-209ENST00000477288 DNMBPQ6XZF7 1577 aa21.92■■□□□ 1.1
VARS2-209ENST00000477288 RBM10P98175 930 aaKnown RBP21.92■■□□□ 1.1
VARS2-209ENST00000477288 LRP2BPQ9P2M1 347 aa21.92■■□□□ 1.1
VARS2-209ENST00000477288 FAM193AP78312 1265 aa21.92■■□□□ 1.1
VARS2-209ENST00000477288 USP5P45974 858 aa21.91■■□□□ 1.1
VARS2-209ENST00000477288 RTEL1-TNFRSF6BF6WH68 1400 aa21.91■■□□□ 1.1
VARS2-209ENST00000477288 IGHMBP2P38935 993 aaKnown RBP21.91■■□□□ 1.1
VARS2-209ENST00000477288 CCDC97Q96F63 343 aaPredicted RBP21.91■■□□□ 1.1
VARS2-209ENST00000477288 RRS1Q15050 365 aaKnown RBP21.9■■□□□ 1.1
VARS2-209ENST00000477288 CEP126Q9P2H0 1117 aa21.9■■□□□ 1.1
VARS2-209ENST00000477288 AEBP1Q8IUX7 1158 aa21.9■■□□□ 1.1
VARS2-209ENST00000477288 KIAA1107Q9UPP5 1409 aa21.9■■□□□ 1.1
VARS2-209ENST00000477288 ZC3H6P61129 1189 aaKnown RBP21.89■■□□□ 1.1
VARS2-209ENST00000477288 NBPF1Q3BBV0 1214 aa21.89■■□□□ 1.1
VARS2-209ENST00000477288 CCDC192P0DO97 292 aa21.89■■□□□ 1.09
VARS2-209ENST00000477288 SRGAP3O43295 1099 aa21.89■■□□□ 1.09
VARS2-209ENST00000477288 TMOD2Q9NZR1 351 aa21.89■■□□□ 1.09
VARS2-209ENST00000477288 BCAR3O75815 825 aa21.89■■□□□ 1.09
VARS2-209ENST00000477288 CCDC66A2RUB6 948 aa21.88■■□□□ 1.09
VARS2-209ENST00000477288 BMP2KQ9NSY1 1161 aaPredicted RBP21.88■■□□□ 1.09
VARS2-209ENST00000477288 SSR1P43307 286 aaKnown RBP21.88■■□□□ 1.09
VARS2-209ENST00000477288 SCAPERQ9BY12 1400 aa21.88■■□□□ 1.09
VARS2-209ENST00000477288 KIAA0754O94854 1291 aa21.88■■□□□ 1.09
VARS2-209ENST00000477288 IDH1O75874 414 aaKnown RBP21.87■■□□□ 1.09
VARS2-209ENST00000477288 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
VARS2-209ENST00000477288 CDKL5O76039 1030 aa21.87■■□□□ 1.09
VARS2-209ENST00000477288 MTERF4Q7Z6M4 381 aaKnown RBP21.87■■□□□ 1.09
VARS2-209ENST00000477288 LARP1BQ659C4 914 aaKnown RBP21.86■■□□□ 1.09
VARS2-209ENST00000477288 CHMP4BP1P59074 171 aa21.86■■□□□ 1.09
VARS2-209ENST00000477288 CWC27Q6UX04 472 aaKnown RBP21.86■■□□□ 1.09
VARS2-209ENST00000477288 ABCF2Q9UG63 623 aa21.85■■□□□ 1.09
VARS2-209ENST00000477288 KIAA0586Q9BVV6 1533 aa21.85■■□□□ 1.09
VARS2-209ENST00000477288 HECW1Q76N89 1606 aa21.85■■□□□ 1.09
VARS2-209ENST00000477288 BLOC1S2Q6QNY1 142 aa21.85■■□□□ 1.09
VARS2-209ENST00000477288 TXLNBQ8N3L3 684 aa21.85■■□□□ 1.09
VARS2-209ENST00000477288 CTNNA3Q9UI47 895 aa21.85■■□□□ 1.09
VARS2-209ENST00000477288 EZRP15311 586 aaKnown RBP21.85■■□□□ 1.09
VARS2-209ENST00000477288 PDRG1Q9NUG6 133 aa21.84■■□□□ 1.09
VARS2-209ENST00000477288 LRRFIP2Q9Y608 721 aaKnown RBP21.84■■□□□ 1.09
VARS2-209ENST00000477288 IL1RAPL2Q9NP60 686 aa21.84■■□□□ 1.09
VARS2-209ENST00000477288 STARD3NLO95772 234 aa21.84■■□□□ 1.09
VARS2-209ENST00000477288 GBP2P32456 591 aaPredicted RBP21.84■■□□□ 1.09
VARS2-209ENST00000477288 NBPF8Q3BBV2 869 aa21.84■■□□□ 1.09
VARS2-209ENST00000477288 KRT85P78386 507 aa21.83■■□□□ 1.09
VARS2-209ENST00000477288 AIDAQ96BJ3 306 aa21.83■■□□□ 1.09
VARS2-209ENST00000477288 JAKMIP1Q96N16 626 aaKnown RBP21.83■■□□□ 1.09
VARS2-209ENST00000477288 GOLGA6L7A0A1B0GV03 622 aa21.83■■□□□ 1.09
VARS2-209ENST00000477288 CBFA2T2O43439 604 aa21.83■■□□□ 1.09
VARS2-209ENST00000477288 ABCA10Q8WWZ4 1543 aa21.83■■□□□ 1.08
VARS2-209ENST00000477288 DESP17661 470 aa21.82■■□□□ 1.08
VARS2-209ENST00000477288 PDE3AQ14432 1141 aa21.82■■□□□ 1.08
VARS2-209ENST00000477288 WDR33Q9C0J8 1336 aaKnown RBP21.82■■□□□ 1.08
VARS2-209ENST00000477288 METTL24Q5JXM2 366 aa21.81■■□□□ 1.08
VARS2-209ENST00000477288 CCDC112Q8NEF3 446 aa21.81■■□□□ 1.08
VARS2-209ENST00000477288 SLC52A1Q9NWF4 448 aa21.81■■□□□ 1.08
VARS2-209ENST00000477288 ZPR1O75312 459 aa21.81■■□□□ 1.08
VARS2-209ENST00000477288 SPATA32Q96LK8 384 aa21.81■■□□□ 1.08
VARS2-209ENST00000477288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.81■■□□□ 1.08
VARS2-209ENST00000477288 DAPK1P53355 1430 aa21.8■■□□□ 1.08
VARS2-209ENST00000477288 CEP57L1Q8IYX8 460 aa21.8■■□□□ 1.08
VARS2-209ENST00000477288 CRACR2BQ8N4Y2 399 aaPredicted RBP21.8■■□□□ 1.08
VARS2-209ENST00000477288 SCLT1Q96NL6 688 aa21.8■■□□□ 1.08
VARS2-209ENST00000477288 ERLIN1O75477 346 aa21.8■■□□□ 1.08
VARS2-209ENST00000477288 HMGN5P82970 282 aaKnown RBP21.8■■□□□ 1.08
VARS2-209ENST00000477288 PTCD1O75127 700 aaKnown RBP21.79■■□□□ 1.08
VARS2-209ENST00000477288 TAF3Q5VWG9 929 aa21.79■■□□□ 1.08
VARS2-209ENST00000477288 ATF7IPQ6VMQ6 1270 aa21.79■■□□□ 1.08
VARS2-209ENST00000477288 POLR3DP05423 398 aaPredicted RBP21.79■■□□□ 1.08
VARS2-209ENST00000477288 EIF5P55010 431 aaKnown RBP21.79■■□□□ 1.08
VARS2-209ENST00000477288 ZNF652Q9Y2D9 606 aa21.79■■□□□ 1.08
VARS2-209ENST00000477288 IMMTQ16891 758 aaKnown RBP21.78■■□□□ 1.08
VARS2-209ENST00000477288 KIAA1328Q86T90 577 aa21.78■■□□□ 1.08
VARS2-209ENST00000477288 RAPGEF3O95398 923 aa21.78■■□□□ 1.08
VARS2-209ENST00000477288 PPM1FP49593 454 aaPredicted RBP21.78■■□□□ 1.08
VARS2-209ENST00000477288 TMOD3Q9NYL9 352 aa21.78■■□□□ 1.08
VARS2-209ENST00000477288 GNAT3A8MTJ3 354 aa21.78■■□□□ 1.08
VARS2-209ENST00000477288 CHD1LQ86WJ1 897 aa21.78■■□□□ 1.08
VARS2-209ENST00000477288 NUTM1Q86Y26 1132 aa21.78■■□□□ 1.08
VARS2-209ENST00000477288 WASF1Q92558 559 aa21.78■■□□□ 1.08
VARS2-209ENST00000477288 BRPF3Q9ULD4 1205 aa21.77■■□□□ 1.08
VARS2-209ENST00000477288 K7ELQ4 463 aaPredicted RBP21.77■■□□□ 1.08
VARS2-209ENST00000477288 EPRSP07814 1512 aaKnown RBP21.77■■□□□ 1.08
VARS2-209ENST00000477288 EIF3JO75822 258 aaKnown RBP21.77■■□□□ 1.08
VARS2-209ENST00000477288 PAXIP1Q6ZW49 1069 aaPredicted RBP21.77■■□□□ 1.08
VARS2-209ENST00000477288 WDR63Q8IWG1 891 aa21.77■■□□□ 1.08
VARS2-209ENST00000477288 TAF4BQ92750 862 aa21.77■■□□□ 1.08
VARS2-209ENST00000477288 MIS18AQ9NYP9 233 aa21.77■■□□□ 1.08
VARS2-209ENST00000477288 ANKIB1Q9P2G1 1089 aa21.77■■□□□ 1.08
VARS2-209ENST00000477288 DHX8Q14562 1220 aaKnown RBP21.76■■□□□ 1.07
VARS2-209ENST00000477288 SEC63Q9UGP8 760 aaKnown RBP21.76■■□□□ 1.07
VARS2-209ENST00000477288 MVPQ14764 893 aaKnown RBP21.76■■□□□ 1.07
VARS2-209ENST00000477288 CAVIN4Q5BKX8 364 aa21.76■■□□□ 1.07
VARS2-209ENST00000477288 ERBINQ96RT1 1412 aa21.76■■□□□ 1.07
VARS2-209ENST00000477288 TRIM21P19474 475 aaKnown RBP21.76■■□□□ 1.07
VARS2-209ENST00000477288 TNIP1Q15025 636 aa21.76■■□□□ 1.07
VARS2-209ENST00000477288 JAKMIP3Q5VZ66 844 aa21.76■■□□□ 1.07
VARS2-209ENST00000477288 TTLL12Q14166 644 aaPredicted RBP21.75■■□□□ 1.07
VARS2-209ENST00000477288 IQCEQ6IPM2 695 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms