RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ARHGEF28Q8N1W1 1705 aaKnown RBP10.46□□□□□ -0.74
BRCA1-214ENST00000477152 GRXCR2A6NFK2 248 aa10.46□□□□□ -0.74
BRCA1-214ENST00000477152 C7P10643 843 aa10.46□□□□□ -0.74
BRCA1-214ENST00000477152 GPIHBP1Q8IV16 184 aa10.45□□□□□ -0.74
BRCA1-214ENST00000477152 NUDT16Q96DE0 195 aaKnown RBP10.45□□□□□ -0.74
BRCA1-214ENST00000477152 NRAPQ86VF7 1730 aa10.45□□□□□ -0.74
BRCA1-214ENST00000477152 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-214ENST00000477152 RGPD1P0DJD0 1748 aa10.45□□□□□ -0.74
BRCA1-214ENST00000477152 EVA1CP58658 441 aa10.44□□□□□ -0.74
BRCA1-214ENST00000477152 FAM98CQ17RN3 349 aaKnown RBP10.44□□□□□ -0.74
BRCA1-214ENST00000477152 CDK19Q9BWU1 502 aa10.43□□□□□ -0.74
BRCA1-214ENST00000477152 BRD4O60885 1362 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-214ENST00000477152 C11orf95C9JLR9 678 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-214ENST00000477152 OXER1Q8TDS5 423 aa10.43□□□□□ -0.74
BRCA1-214ENST00000477152 SPATA31A5Q5VU36 1347 aa10.42□□□□□ -0.74
BRCA1-214ENST00000477152 SPATA31A7Q8IWB4 1347 aa10.42□□□□□ -0.74
BRCA1-214ENST00000477152 PRR36Q9H6K5 1346 aa10.42□□□□□ -0.74
BRCA1-214ENST00000477152 BARGINQ6ZT62 677 aa10.42□□□□□ -0.74
BRCA1-214ENST00000477152 DDX12PQ92771 950 aa10.42□□□□□ -0.74
BRCA1-214ENST00000477152 DEFB132Q7Z7B7 95 aa10.41□□□□□ -0.74
BRCA1-214ENST00000477152 CRYBG1Q9Y4K1 1723 aa10.41□□□□□ -0.74
BRCA1-214ENST00000477152 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
BRCA1-214ENST00000477152 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
BRCA1-214ENST00000477152 NEUROD2Q15784 382 aa10.41□□□□□ -0.74
BRCA1-214ENST00000477152 FAM196AQ6ZSG2 479 aa10.41□□□□□ -0.74
BRCA1-214ENST00000477152 NLRP13Q86W25 1043 aa10.41□□□□□ -0.74
BRCA1-214ENST00000477152 ABTB2Q8N961 1025 aa10.41□□□□□ -0.74
BRCA1-214ENST00000477152 SP7Q8TDD2 431 aaPredicted RBP10.41□□□□□ -0.74
BRCA1-214ENST00000477152 POLR3AO14802 1390 aaPredicted RBP10.4□□□□□ -0.74
BRCA1-214ENST00000477152 PDE3BQ13370 1112 aa10.4□□□□□ -0.74
BRCA1-214ENST00000477152 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.74
BRCA1-214ENST00000477152 C3orf67Q6ZVT6 689 aa10.4□□□□□ -0.74
BRCA1-214ENST00000477152 ACEP12821 1306 aa10.4□□□□□ -0.74
BRCA1-214ENST00000477152 PHRF1Q9P1Y6 1649 aaKnown RBP10.4□□□□□ -0.74
BRCA1-214ENST00000477152 STRN4Q9NRL3 753 aa10.39□□□□□ -0.75
BRCA1-214ENST00000477152 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
BRCA1-214ENST00000477152 TOPAZ1Q8N9V7 1692 aa10.39□□□□□ -0.75
BRCA1-214ENST00000477152 THRAP3Q9Y2W1 955 aaKnown RBP10.39□□□□□ -0.75
BRCA1-214ENST00000477152 SPATA31A1Q5TZJ5 1347 aa10.39□□□□□ -0.75
BRCA1-214ENST00000477152 CENPJQ9HC77 1338 aaPredicted RBP10.39□□□□□ -0.75
BRCA1-214ENST00000477152 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
BRCA1-214ENST00000477152 LRP5O75197 1615 aa10.38□□□□□ -0.75
BRCA1-214ENST00000477152 PRIM1P49642 420 aaKnown RBP10.38□□□□□ -0.75
BRCA1-214ENST00000477152 ZC3H6P61129 1189 aaKnown RBP10.38□□□□□ -0.75
BRCA1-214ENST00000477152 THSD7AQ9UPZ6 1657 aa10.38□□□□□ -0.75
BRCA1-214ENST00000477152 OSBPP22059 807 aa10.37□□□□□ -0.75
BRCA1-214ENST00000477152 CPDO75976 1380 aa10.37□□□□□ -0.75
BRCA1-214ENST00000477152 GPR37O15354 613 aa10.37□□□□□ -0.75
BRCA1-214ENST00000477152 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
BRCA1-214ENST00000477152 DISP2A7MBM2 1401 aa10.36□□□□□ -0.75
BRCA1-214ENST00000477152 PPIP5K1Q6PFW1 1433 aa10.36□□□□□ -0.75
BRCA1-214ENST00000477152 EVI5O60447 810 aa10.36□□□□□ -0.75
BRCA1-214ENST00000477152 CHRNA2Q15822 529 aa10.36□□□□□ -0.75
BRCA1-214ENST00000477152 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
BRCA1-214ENST00000477152 TCP11L2Q8N4U5 519 aa10.36□□□□□ -0.75
BRCA1-214ENST00000477152 EVC2Q86UK5 1308 aa10.36□□□□□ -0.75
BRCA1-214ENST00000477152 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-214ENST00000477152 NUTM2GQ5VZR2 741 aa10.35□□□□□ -0.75
BRCA1-214ENST00000477152 QRICH2Q9H0J4 1663 aa10.35□□□□□ -0.75
BRCA1-214ENST00000477152 SSH2Q76I76 1423 aa10.35□□□□□ -0.75
BRCA1-214ENST00000477152 TMEM132AQ24JP5 1023 aa10.35□□□□□ -0.75
BRCA1-214ENST00000477152 USP35Q9P2H5 1018 aa10.35□□□□□ -0.75
BRCA1-214ENST00000477152 APBA3O96018 575 aa10.34□□□□□ -0.75
BRCA1-214ENST00000477152 GPBP1L1Q9HC44 474 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-214ENST00000477152 NRKQ7Z2Y5 1582 aa10.34□□□□□ -0.75
BRCA1-214ENST00000477152 USP19O94966 1318 aa10.34□□□□□ -0.75
BRCA1-214ENST00000477152 GCP02774 474 aa10.34□□□□□ -0.75
BRCA1-214ENST00000477152 TNS1Q9HBL0 1735 aaKnown RBP10.34□□□□□ -0.75
BRCA1-214ENST00000477152 TRIM37O94972 964 aa10.33□□□□□ -0.76
BRCA1-214ENST00000477152 KCNH5Q8NCM2 988 aa10.33□□□□□ -0.76
BRCA1-214ENST00000477152 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
BRCA1-214ENST00000477152 PSDA5PKW4 1024 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-214ENST00000477152 NBPF1Q3BBV0 1214 aa10.32□□□□□ -0.76
BRCA1-214ENST00000477152 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
BRCA1-214ENST00000477152 TBC1D12O60347 775 aa10.32□□□□□ -0.76
BRCA1-214ENST00000477152 PTCD2Q8WV60 388 aaKnown RBP10.32□□□□□ -0.76
BRCA1-214ENST00000477152 TRPM1Q7Z4N2 1603 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 CRB1P82279 1406 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 POTEJP0CG39 1038 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 FECHP22830 423 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 EZH2Q15910 746 aaKnown RBP10.31□□□□□ -0.76
BRCA1-214ENST00000477152 FAM182BQ5T319 152 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 LARP1Q6PKG0 1096 aaKnown RBP10.31□□□□□ -0.76
BRCA1-214ENST00000477152 AK7Q96M32 723 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 CABP1Q9NZU7 370 aa10.31□□□□□ -0.76
BRCA1-214ENST00000477152 PARP4Q9UKK3 1724 aaKnown RBP10.31□□□□□ -0.76
BRCA1-214ENST00000477152 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 CAMTA1Q9Y6Y1 1673 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 USP6P35125 1406 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 PTGER2P43116 358 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
BRCA1-214ENST00000477152 EP400Q96L91 3159 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 ROCK2O75116 1388 aaKnown RBP10.3□□□□□ -0.76
BRCA1-214ENST00000477152 AATKQ6ZMQ8 1374 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 TTC21AQ8NDW8 1320 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 TOM1L2Q6ZVM7 507 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 CAMKK2Q96RR4 588 aa10.3□□□□□ -0.76
BRCA1-214ENST00000477152 DDB1Q16531 1140 aa10.29□□□□□ -0.76
BRCA1-214ENST00000477152 L3MBTL2Q969R5 705 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms