RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 TSR2Q969E8 191 aaKnown RBP25.83■■□□□ 1.73
CLK2-205ENST00000476983 MYH16Q9H6N6 1097 aa25.83■■□□□ 1.73
CLK2-205ENST00000476983 HSPA1LP34931 641 aa25.83■■□□□ 1.72
CLK2-205ENST00000476983 RAPGEF4Q8WZA2 1011 aa25.83■■□□□ 1.72
CLK2-205ENST00000476983 PLEKHO1Q53GL0 409 aaPredicted RBP25.82■■□□□ 1.72
CLK2-205ENST00000476983 MAP3K5Q99683 1374 aa25.81■■□□□ 1.72
CLK2-205ENST00000476983 FANCIQ9NVI1 1328 aa25.81■■□□□ 1.72
CLK2-205ENST00000476983 RTF1Q92541 710 aaKnown RBP25.81■■□□□ 1.72
CLK2-205ENST00000476983 RCAN3Q9UKA8 241 aa25.81■■□□□ 1.72
CLK2-205ENST00000476983 TATP17735 454 aaPredicted RBP25.81■■□□□ 1.72
CLK2-205ENST00000476983 GNAT3A8MTJ3 354 aa25.8■■□□□ 1.72
CLK2-205ENST00000476983 CALD1Q05682 793 aaKnown RBP25.8■■□□□ 1.72
CLK2-205ENST00000476983 ZNF530Q6P9A1 599 aaPredicted RBP25.8■■□□□ 1.72
CLK2-205ENST00000476983 AMOTQ4VCS5 1084 aa25.79■■□□□ 1.72
CLK2-205ENST00000476983 CRB1P82279 1406 aa25.77■■□□□ 1.72
CLK2-205ENST00000476983 CARD10Q9BWT7 1032 aa25.77■■□□□ 1.72
CLK2-205ENST00000476983 USP35Q9P2H5 1018 aa25.77■■□□□ 1.72
CLK2-205ENST00000476983 NRAPQ86VF7 1730 aa25.76■■□□□ 1.71
CLK2-205ENST00000476983 PARP4Q9UKK3 1724 aaKnown RBP25.76■■□□□ 1.71
CLK2-205ENST00000476983 IFT57Q9NWB7 429 aa25.76■■□□□ 1.71
CLK2-205ENST00000476983 LRRC37A3O60309 1634 aa25.75■■□□□ 1.71
CLK2-205ENST00000476983 HTATSF1O43719 755 aaKnown RBP25.74■■□□□ 1.71
CLK2-205ENST00000476983 GNAI1P63096 354 aa25.74■■□□□ 1.71
CLK2-205ENST00000476983 PKD1L3Q7Z443 1732 aa25.74■■□□□ 1.71
CLK2-205ENST00000476983 IRX6P78412 446 aaPredicted RBP25.74■■□□□ 1.71
CLK2-205ENST00000476983 C1orf141Q5JVX7 400 aa25.74■■□□□ 1.71
CLK2-205ENST00000476983 VIRMAQ69YN4 1812 aaKnown RBP25.73■■□□□ 1.71
CLK2-205ENST00000476983 LRP6O75581 1613 aa25.73■■□□□ 1.71
CLK2-205ENST00000476983 ZNF853P0CG23 659 aa25.73■■□□□ 1.71
CLK2-205ENST00000476983 EXOSC9Q06265 439 aaKnown RBP25.73■■□□□ 1.71
CLK2-205ENST00000476983 AKAP4Q5JQC9 854 aa25.73■■□□□ 1.71
CLK2-205ENST00000476983 NEFLP07196 543 aa25.72■■□□□ 1.71
CLK2-205ENST00000476983 IL17REQ8NFR9 667 aa25.72■■□□□ 1.71
CLK2-205ENST00000476983 CFAP44Q96MT7 982 aa25.72■■□□□ 1.71
CLK2-205ENST00000476983 MBIPQ9NS73 344 aa25.72■■□□□ 1.71
CLK2-205ENST00000476983 OVOS2A0A0G2JMS6 1433 aa25.72■■□□□ 1.71
CLK2-205ENST00000476983 SPATA31A6Q5VVP1 1343 aa25.72■■□□□ 1.71
CLK2-205ENST00000476983 NWD2Q9ULI1 1742 aa25.71■■□□□ 1.71
CLK2-205ENST00000476983 C8orf37Q96NL8 207 aa25.71■■□□□ 1.71
CLK2-205ENST00000476983 SPG7Q9UQ90 795 aa25.71■■□□□ 1.71
CLK2-205ENST00000476983 MPRIPQ6WCQ1 1025 aa25.7■■□□□ 1.71
CLK2-205ENST00000476983 SLIT2O94813 1529 aa25.7■■□□□ 1.7
CLK2-205ENST00000476983 IL2RBP14784 551 aa25.7■■□□□ 1.7
CLK2-205ENST00000476983 LGR6Q9HBX8 967 aa25.7■■□□□ 1.7
CLK2-205ENST00000476983 FKBP8Q14318 412 aa25.69■■□□□ 1.7
CLK2-205ENST00000476983 MIS18AQ9NYP9 233 aa25.68■■□□□ 1.7
CLK2-205ENST00000476983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.68■■□□□ 1.7
CLK2-205ENST00000476983 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
CLK2-205ENST00000476983 PLEKHG2Q9H7P9 1386 aa25.67■■□□□ 1.7
CLK2-205ENST00000476983 RRP1P56182 461 aaKnown RBP25.66■■□□□ 1.7
CLK2-205ENST00000476983 NGLY1Q96IV0 654 aa25.66■■□□□ 1.7
CLK2-205ENST00000476983 CEMIPQ8WUJ3 1361 aa25.66■■□□□ 1.7
CLK2-205ENST00000476983 CHL1O00533 1208 aa25.66■■□□□ 1.7
CLK2-205ENST00000476983 PHKG2P15735 406 aa25.66■■□□□ 1.7
CLK2-205ENST00000476983 RNMTO43148 476 aaKnown RBP25.65■■□□□ 1.7
CLK2-205ENST00000476983 WNK3Q9BYP7 1800 aa25.65■■□□□ 1.7
CLK2-205ENST00000476983 SHANK3Q9BYB0 1731 aa25.65■■□□□ 1.7
CLK2-205ENST00000476983 CYP27B1O15528 508 aa25.64■■□□□ 1.7
CLK2-205ENST00000476983 ZCRB1Q8TBF4 217 aaKnown RBP25.64■■□□□ 1.7
CLK2-205ENST00000476983 TSPYL4Q9UJ04 414 aa25.64■■□□□ 1.7
CLK2-205ENST00000476983 BCAR3O75815 825 aa25.64■■□□□ 1.69
CLK2-205ENST00000476983 IFNL2Q8IZJ0 200 aa25.64■■□□□ 1.69
CLK2-205ENST00000476983 PLIN1O60240 522 aa25.63■■□□□ 1.69
CLK2-205ENST00000476983 SCN11AQ9UI33 1791 aa25.62■■□□□ 1.69
CLK2-205ENST00000476983 MEX3CQ5U5Q3 659 aaKnown RBP25.62■■□□□ 1.69
CLK2-205ENST00000476983 ADAMTS7Q9UKP4 1686 aa25.62■■□□□ 1.69
CLK2-205ENST00000476983 ELL2O00472 640 aaPredicted RBP25.62■■□□□ 1.69
CLK2-205ENST00000476983 CCDC9Q9Y3X0 531 aaKnown RBP25.62■■□□□ 1.69
CLK2-205ENST00000476983 DISP2A7MBM2 1401 aa25.61■■□□□ 1.69
CLK2-205ENST00000476983 KDM6AO15550 1401 aaPredicted RBP25.61■■□□□ 1.69
CLK2-205ENST00000476983 RARSP54136 660 aaKnown RBP25.61■■□□□ 1.69
CLK2-205ENST00000476983 TEFQ10587 303 aa25.61■■□□□ 1.69
CLK2-205ENST00000476983 TSPYL6Q8N831 410 aa25.61■■□□□ 1.69
CLK2-205ENST00000476983 BCL2L13Q9BXK5 485 aa25.61■■□□□ 1.69
CLK2-205ENST00000476983 SPATA31A1Q5TZJ5 1347 aa25.6■■□□□ 1.69
CLK2-205ENST00000476983 PCDH11XQ9BZA7 1347 aa25.6■■□□□ 1.69
CLK2-205ENST00000476983 PCDH11YQ9BZA8 1340 aa25.6■■□□□ 1.69
CLK2-205ENST00000476983 TAF7Q15545 349 aaPredicted RBP25.6■■□□□ 1.69
CLK2-205ENST00000476983 UNC5CLQ8IV45 518 aa25.6■■□□□ 1.69
CLK2-205ENST00000476983 KRT24Q2M2I5 525 aa25.6■■□□□ 1.69
CLK2-205ENST00000476983 C8orf58Q8NAV2 365 aa25.6■■□□□ 1.69
CLK2-205ENST00000476983 CT47B1P0C2W7 299 aaPredicted RBP25.59■■□□□ 1.69
CLK2-205ENST00000476983 BCL9LQ86UU0 1499 aa25.59■■□□□ 1.69
CLK2-205ENST00000476983 DDX54Q8TDD1 881 aaKnown RBP25.58■■□□□ 1.69
CLK2-205ENST00000476983 SIPA1L3O60292 1781 aaPredicted RBP25.58■■□□□ 1.69
CLK2-205ENST00000476983 SPATA31A5Q5VU36 1347 aa25.58■■□□□ 1.69
CLK2-205ENST00000476983 SPATA31A7Q8IWB4 1347 aa25.58■■□□□ 1.69
CLK2-205ENST00000476983 TWISTNBQ3B726 338 aaPredicted RBP25.57■■□□□ 1.68
CLK2-205ENST00000476983 KDM3BQ7LBC6 1761 aa25.57■■□□□ 1.68
CLK2-205ENST00000476983 FNBP4Q8N3X1 1017 aaPredicted RBP25.55■■□□□ 1.68
CLK2-205ENST00000476983 VAMP4O75379 141 aa25.55■■□□□ 1.68
CLK2-205ENST00000476983 DCAF5Q96JK2 942 aa25.55■■□□□ 1.68
CLK2-205ENST00000476983 USP21Q9UK80 565 aa25.55■■□□□ 1.68
CLK2-205ENST00000476983 HSP90AB1P08238 724 aaKnown RBP25.54■■□□□ 1.68
CLK2-205ENST00000476983 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.54■■□□□ 1.68
CLK2-205ENST00000476983 BTBD11A6QL63 1104 aa25.53■■□□□ 1.68
CLK2-205ENST00000476983 SSH1Q8WYL5 1049 aa25.53■■□□□ 1.68
CLK2-205ENST00000476983 SMC4Q9NTJ3 1288 aa25.53■■□□□ 1.68
CLK2-205ENST00000476983 THRAP3Q9Y2W1 955 aaKnown RBP25.53■■□□□ 1.68
CLK2-205ENST00000476983 BABAM1Q9NWV8 329 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms