RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 MARF1Q9Y4F3 1742 aaKnown RBP26.31■■□□□ 1.8
LIMS2-214ENST00000476932 TTC21AQ8NDW8 1320 aa26.31■■□□□ 1.8
LIMS2-214ENST00000476932 XRN1Q8IZH2 1706 aaKnown RBP26.3■■□□□ 1.8
LIMS2-214ENST00000476932 DDIT3P35638 169 aa26.3■■□□□ 1.8
LIMS2-214ENST00000476932 MSH6P52701 1360 aa26.3■■□□□ 1.8
LIMS2-214ENST00000476932 DCTPP1Q9H773 170 aa26.3■■□□□ 1.8
LIMS2-214ENST00000476932 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
LIMS2-214ENST00000476932 KDRP35968 1356 aa26.29■■□□□ 1.8
LIMS2-214ENST00000476932 AMOTL2Q9Y2J4 779 aa26.28■■□□□ 1.8
LIMS2-214ENST00000476932 SBNO1A3KN83 1393 aa26.28■■□□□ 1.8
LIMS2-214ENST00000476932 SOX12O15370 315 aa26.28■■□□□ 1.8
LIMS2-214ENST00000476932 HAP1P54257 671 aaPredicted RBP26.28■■□□□ 1.8
LIMS2-214ENST00000476932 LRRC37A3O60309 1634 aa26.28■■□□□ 1.8
LIMS2-214ENST00000476932 GSPT1P15170 499 aaKnown RBP26.27■■□□□ 1.8
LIMS2-214ENST00000476932 MCM4P33991 863 aa26.27■■□□□ 1.8
LIMS2-214ENST00000476932 FLT4P35916 1363 aa26.27■■□□□ 1.8
LIMS2-214ENST00000476932 ANKRD44Q8N8A2 993 aa26.27■■□□□ 1.8
LIMS2-214ENST00000476932 FER1L4A9Z1Z3 1794 aa26.26■■□□□ 1.79
LIMS2-214ENST00000476932 PLEKHM2Q8IWE5 1019 aa26.26■■□□□ 1.79
LIMS2-214ENST00000476932 PTPRCP08575 1304 aa26.26■■□□□ 1.79
LIMS2-214ENST00000476932 RTN4Q9NQC3 1192 aaKnown RBP26.26■■□□□ 1.79
LIMS2-214ENST00000476932 EID1Q9Y6B2 187 aa26.26■■□□□ 1.79
LIMS2-214ENST00000476932 RTL1A6NKG5 1358 aa26.25■■□□□ 1.79
LIMS2-214ENST00000476932 FOXO3O43524 673 aa26.25■■□□□ 1.79
LIMS2-214ENST00000476932 TBX22Q9Y458 520 aa26.25■■□□□ 1.79
LIMS2-214ENST00000476932 USP54Q70EL1 1684 aa26.24■■□□□ 1.79
LIMS2-214ENST00000476932 MTHFSDQ2M296 383 aaKnown RBP26.24■■□□□ 1.79
LIMS2-214ENST00000476932 CEP85Q6P2H3 762 aa26.23■■□□□ 1.79
LIMS2-214ENST00000476932 CDC45O75419 566 aa26.23■■□□□ 1.79
LIMS2-214ENST00000476932 IGSF1Q8N6C5 1336 aa26.23■■□□□ 1.79
LIMS2-214ENST00000476932 FAM208AQ9UK61 1670 aaKnown RBP26.22■■□□□ 1.79
LIMS2-214ENST00000476932 CD2BP2O95400 341 aaKnown RBP26.21■■□□□ 1.79
LIMS2-214ENST00000476932 MIS18AQ9NYP9 233 aa26.21■■□□□ 1.79
LIMS2-214ENST00000476932 RPAP2Q8IXW5 612 aaPredicted RBP26.21■■□□□ 1.79
LIMS2-214ENST00000476932 MEIS3Q99687 375 aa26.21■■□□□ 1.79
LIMS2-214ENST00000476932 NWD1Q149M9 1564 aa26.2■■□□□ 1.78
LIMS2-214ENST00000476932 TTC22Q5TAA0 569 aa26.19■■□□□ 1.78
LIMS2-214ENST00000476932 C16orf71Q8IYS4 520 aaPredicted RBP26.19■■□□□ 1.78
LIMS2-214ENST00000476932 EYA1Q99502 592 aa26.19■■□□□ 1.78
LIMS2-214ENST00000476932 SLC4A2P04920 1241 aa26.18■■□□□ 1.78
LIMS2-214ENST00000476932 NGDNQ8NEJ9 315 aaKnown RBP26.17■■□□□ 1.78
LIMS2-214ENST00000476932 OTUD7AQ8TE49 926 aaPredicted RBP26.17■■□□□ 1.78
LIMS2-214ENST00000476932 G2E3Q7L622 706 aa26.16■■□□□ 1.78
LIMS2-214ENST00000476932 TSPYL4Q9UJ04 414 aa26.16■■□□□ 1.78
LIMS2-214ENST00000476932 ANKARQ7Z5J8 1434 aa26.16■■□□□ 1.78
LIMS2-214ENST00000476932 N4BP2Q86UW6 1770 aaPredicted RBP26.15■■□□□ 1.78
LIMS2-214ENST00000476932 RBM42Q9BTD8 480 aaKnown RBP26.15■■□□□ 1.78
LIMS2-214ENST00000476932 HSP90AB1P08238 724 aaKnown RBP26.14■■□□□ 1.78
LIMS2-214ENST00000476932 RTF1Q92541 710 aaKnown RBP26.14■■□□□ 1.77
LIMS2-214ENST00000476932 AMPHP49418 695 aa26.13■■□□□ 1.77
LIMS2-214ENST00000476932 CIZ1Q9ULV3 898 aaPredicted RBP26.13■■□□□ 1.77
LIMS2-214ENST00000476932 CACNA1FO60840 1977 aa26.13■■□□□ 1.77
LIMS2-214ENST00000476932 GAS2L2Q8NHY3 880 aa26.13■■□□□ 1.77
LIMS2-214ENST00000476932 TUBGCP6Q96RT7 1819 aa26.12■■□□□ 1.77
LIMS2-214ENST00000476932 SMARCA5O60264 1052 aaPredicted RBP26.12■■□□□ 1.77
LIMS2-214ENST00000476932 K7ELQ4 463 aaPredicted RBP26.11■■□□□ 1.77
LIMS2-214ENST00000476932 FSD2A1L4K1 749 aa26.11■■□□□ 1.77
LIMS2-214ENST00000476932 F6X3S4 739 aa26.11■■□□□ 1.77
LIMS2-214ENST00000476932 TRAK2O60296 914 aa26.11■■□□□ 1.77
LIMS2-214ENST00000476932 TNPO1Q92973 898 aaKnown RBP26.09■■□□□ 1.77
LIMS2-214ENST00000476932 DDX11L8A8MPP1 907 aa26.09■■□□□ 1.77
LIMS2-214ENST00000476932 RAB3GAP1Q15042 981 aa26.09■■□□□ 1.77
LIMS2-214ENST00000476932 L1TD1Q5T7N2 865 aaKnown RBP26.09■■□□□ 1.77
LIMS2-214ENST00000476932 THEMISQ8N1K5 641 aaPredicted RBP26.09■■□□□ 1.77
LIMS2-214ENST00000476932 PLPPR3Q6T4P5 718 aa26.08■■□□□ 1.77
LIMS2-214ENST00000476932 LTN1O94822 1766 aa26.08■■□□□ 1.77
LIMS2-214ENST00000476932 HTATSF1O43719 755 aaKnown RBP26.08■■□□□ 1.77
LIMS2-214ENST00000476932 SDSP20132 328 aa26.08■■□□□ 1.77
LIMS2-214ENST00000476932 HOXC9P31274 260 aa26.08■■□□□ 1.77
LIMS2-214ENST00000476932 NLRP6P59044 892 aa26.08■■□□□ 1.77
LIMS2-214ENST00000476932 CCT4P50991 539 aaKnown RBP26.07■■□□□ 1.76
LIMS2-214ENST00000476932 KCNA6P17658 529 aa26.07■■□□□ 1.76
LIMS2-214ENST00000476932 APBB1O00213 710 aa26.05■■□□□ 1.76
LIMS2-214ENST00000476932 SLC4A10Q6U841 1118 aa26.05■■□□□ 1.76
LIMS2-214ENST00000476932 USP26Q9BXU7 913 aa26.05■■□□□ 1.76
LIMS2-214ENST00000476932 GZF1Q9H116 711 aaPredicted RBP26.05■■□□□ 1.76
LIMS2-214ENST00000476932 EIF5BO60841 1220 aaKnown RBP26.04■■□□□ 1.76
LIMS2-214ENST00000476932 GNAT3A8MTJ3 354 aa26.03■■□□□ 1.76
LIMS2-214ENST00000476932 NUTM2GQ5VZR2 741 aa26.03■■□□□ 1.76
LIMS2-214ENST00000476932 FOXD4L1Q9NU39 408 aa26.03■■□□□ 1.76
LIMS2-214ENST00000476932 MAP3K5Q99683 1374 aa26.03■■□□□ 1.76
LIMS2-214ENST00000476932 AK9Q5TCS8 1911 aa26.03■■□□□ 1.76
LIMS2-214ENST00000476932 HMMRO75330 724 aa26.03■■□□□ 1.76
LIMS2-214ENST00000476932 RABEP1Q15276 862 aa26.02■■□□□ 1.76
LIMS2-214ENST00000476932 GOLGA6L3A6NEY3 463 aa26.01■■□□□ 1.75
LIMS2-214ENST00000476932 CHD2O14647 1828 aaKnown RBP26.01■■□□□ 1.75
LIMS2-214ENST00000476932 XRCC6P12956 609 aaKnown RBP eCLIP26.01■■□□□ 1.75
LIMS2-214ENST00000476932 FLIIQ13045 1269 aa26.01■■□□□ 1.75
LIMS2-214ENST00000476932 IL17REQ8NFR9 667 aa26■■□□□ 1.75
LIMS2-214ENST00000476932 STK31Q9BXU1 1019 aa26■■□□□ 1.75
LIMS2-214ENST00000476932 OSBPL3Q9H4L5 887 aa26■■□□□ 1.75
LIMS2-214ENST00000476932 HSP90AA1P07900 732 aaKnown RBP25.99■■□□□ 1.75
LIMS2-214ENST00000476932 SALL3Q9BXA9 1300 aa25.99■■□□□ 1.75
LIMS2-214ENST00000476932 GNAI2P04899 355 aa25.99■■□□□ 1.75
LIMS2-214ENST00000476932 CCDC30Q5VVM6 783 aa25.98■■□□□ 1.75
LIMS2-214ENST00000476932 GBP4Q96PP9 640 aa25.98■■□□□ 1.75
LIMS2-214ENST00000476932 PXDNLA1KZ92 1463 aa25.98■■□□□ 1.75
LIMS2-214ENST00000476932 TRHP20396 242 aaPredicted RBP25.98■■□□□ 1.75
LIMS2-214ENST00000476932 MED1Q15648 1581 aaPredicted RBP25.97■■□□□ 1.75
LIMS2-214ENST00000476932 NFAT5O94916 1531 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms