RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
MSL3-213ENST00000476743 SRCAPQ6ZRS2 3230 aa18.79■□□□□ 0.6
MSL3-213ENST00000476743 NPC1L1Q9UHC9 1359 aa18.79■□□□□ 0.6
MSL3-213ENST00000476743 TNNT2P45379 298 aaPredicted RBP18.78■□□□□ 0.6
MSL3-213ENST00000476743 ZCRB1Q8TBF4 217 aaKnown RBP18.78■□□□□ 0.6
MSL3-213ENST00000476743 BTAF1O14981 1849 aa18.77■□□□□ 0.6
MSL3-213ENST00000476743 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.6
MSL3-213ENST00000476743 KCNQ2O43526 872 aa18.76■□□□□ 0.59
MSL3-213ENST00000476743 TATP17735 454 aaPredicted RBP18.76■□□□□ 0.59
MSL3-213ENST00000476743 EIF4A2Q14240 407 aaKnown RBP18.76■□□□□ 0.59
MSL3-213ENST00000476743 EYA1Q99502 592 aa18.76■□□□□ 0.59
MSL3-213ENST00000476743 DOT1LQ8TEK3 1739 aa18.76■□□□□ 0.59
MSL3-213ENST00000476743 PLEKHG2Q9H7P9 1386 aa18.76■□□□□ 0.59
MSL3-213ENST00000476743 DDX54Q8TDD1 881 aaKnown RBP18.75■□□□□ 0.59
MSL3-213ENST00000476743 PROM2Q8N271 834 aa18.73■□□□□ 0.59
MSL3-213ENST00000476743 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
MSL3-213ENST00000476743 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
MSL3-213ENST00000476743 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
MSL3-213ENST00000476743 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
MSL3-213ENST00000476743 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
MSL3-213ENST00000476743 LRP5O75197 1615 aa18.71■□□□□ 0.59
MSL3-213ENST00000476743 PSDA5PKW4 1024 aaPredicted RBP18.7■□□□□ 0.58
MSL3-213ENST00000476743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.582e-8■■■■■ 35.5
MSL3-213ENST00000476743 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
MSL3-213ENST00000476743 NBPF14Q5TI25 921 aa18.69■□□□□ 0.58
MSL3-213ENST00000476743 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
MSL3-213ENST00000476743 PAPPAQ13219 1627 aa18.68■□□□□ 0.58
MSL3-213ENST00000476743 CYP27B1O15528 508 aa18.68■□□□□ 0.58
MSL3-213ENST00000476743 TXNRD1Q16881 649 aa18.68■□□□□ 0.58
MSL3-213ENST00000476743 LY75O60449 1722 aa18.68■□□□□ 0.58
MSL3-213ENST00000476743 CC2D1BQ5T0F9 858 aaKnown RBP18.67■□□□□ 0.58
MSL3-213ENST00000476743 IL13P35225 146 aa18.66■□□□□ 0.58
MSL3-213ENST00000476743 PRIM1P49642 420 aaKnown RBP18.66■□□□□ 0.58
MSL3-213ENST00000476743 MTHFSP49914 203 aa18.66■□□□□ 0.58
MSL3-213ENST00000476743 NKX1-1Q15270 411 aaPredicted RBP18.66■□□□□ 0.58
MSL3-213ENST00000476743 SPG7Q9UQ90 795 aa18.66■□□□□ 0.58
MSL3-213ENST00000476743 KDRP35968 1356 aa18.66■□□□□ 0.58
MSL3-213ENST00000476743 ITGB4P16144 1822 aa18.65■□□□□ 0.58
MSL3-213ENST00000476743 ANO8Q9HCE9 1232 aaPredicted RBP18.65■□□□□ 0.58
MSL3-213ENST00000476743 CASZ1Q86V15 1759 aa18.63■□□□□ 0.57
MSL3-213ENST00000476743 COL3A1P02461 1466 aaPredicted RBP18.63■□□□□ 0.57
MSL3-213ENST00000476743 SYTL4Q96C24 671 aaPredicted RBP18.62■□□□□ 0.57
MSL3-213ENST00000476743 PHKG2P15735 406 aa18.61■□□□□ 0.57
MSL3-213ENST00000476743 SLC27A3Q5K4L6 730 aa18.61■□□□□ 0.57
MSL3-213ENST00000476743 AEBP1Q8IUX7 1158 aa18.6■□□□□ 0.57
MSL3-213ENST00000476743 IFNL2Q8IZJ0 200 aa18.6■□□□□ 0.57
MSL3-213ENST00000476743 LRRC4BQ9NT99 713 aa18.6■□□□□ 0.57
MSL3-213ENST00000476743 QSER1Q2KHR3 1735 aa18.59■□□□□ 0.57
MSL3-213ENST00000476743 SLC15A2Q16348 729 aa18.58■□□□□ 0.56
MSL3-213ENST00000476743 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.56
MSL3-213ENST00000476743 SULT6B1Q6IMI4 303 aa18.58■□□□□ 0.56
MSL3-213ENST00000476743 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
MSL3-213ENST00000476743 PLEKHO1Q53GL0 409 aaPredicted RBP18.57■□□□□ 0.56
MSL3-213ENST00000476743 STK32BQ9NY57 414 aa18.57■□□□□ 0.56
MSL3-213ENST00000476743 TAF1LQ8IZX4 1826 aa18.54■□□□□ 0.56
MSL3-213ENST00000476743 HSP90AB1P08238 724 aaKnown RBP18.54■□□□□ 0.56
MSL3-213ENST00000476743 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
MSL3-213ENST00000476743 PIGBQ92521 554 aa18.54■□□□□ 0.56
MSL3-213ENST00000476743 AKT1S1Q96B36 256 aa18.54■□□□□ 0.56
MSL3-213ENST00000476743 PALLDQ8WX93 1383 aa18.54■□□□□ 0.56
MSL3-213ENST00000476743 TUBGCP6Q96RT7 1819 aa18.53■□□□□ 0.56
MSL3-213ENST00000476743 KDM6AO15550 1401 aaPredicted RBP18.53■□□□□ 0.56
MSL3-213ENST00000476743 ZNF827Q17R98 1081 aa18.53■□□□□ 0.56
MSL3-213ENST00000476743 ZNF530Q6P9A1 599 aaPredicted RBP18.53■□□□□ 0.56
MSL3-213ENST00000476743 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
MSL3-213ENST00000476743 C5P01031 1676 aa18.53■□□□□ 0.56
MSL3-213ENST00000476743 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
MSL3-213ENST00000476743 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
MSL3-213ENST00000476743 SMARCC1Q92922 1105 aaPredicted RBP18.52■□□□□ 0.56
MSL3-213ENST00000476743 CCNL1Q9UK58 526 aaPredicted RBP18.52■□□□□ 0.56
MSL3-213ENST00000476743 SCN11AQ9UI33 1791 aa18.52■□□□□ 0.55
MSL3-213ENST00000476743 ERVV-2B6SEH9 535 aa18.51■□□□□ 0.55
MSL3-213ENST00000476743 PDGFDQ9GZP0 370 aaPredicted RBP18.51■□□□□ 0.55
MSL3-213ENST00000476743 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
MSL3-213ENST00000476743 HMOX1P09601 288 aa18.5■□□□□ 0.55
MSL3-213ENST00000476743 KCNQ4P56696 695 aa18.5■□□□□ 0.55
MSL3-213ENST00000476743 SPON1Q9HCB6 807 aa18.5■□□□□ 0.55
MSL3-213ENST00000476743 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
MSL3-213ENST00000476743 ADAMTS7Q9UKP4 1686 aa18.5■□□□□ 0.55
MSL3-213ENST00000476743 VIRMAQ69YN4 1812 aaKnown RBP18.49■□□□□ 0.55
MSL3-213ENST00000476743 COL24A1Q17RW2 1714 aa18.49■□□□□ 0.55
MSL3-213ENST00000476743 HMGB2P26583 209 aaKnown RBP18.48■□□□□ 0.55
MSL3-213ENST00000476743 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
MSL3-213ENST00000476743 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
MSL3-213ENST00000476743 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
MSL3-213ENST00000476743 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
MSL3-213ENST00000476743 MRC1P22897 1456 aa18.46■□□□□ 0.55
MSL3-213ENST00000476743 C4BP0C0L5 1744 aa18.46■□□□□ 0.55
MSL3-213ENST00000476743 ATG3Q9NT62 314 aa18.46■□□□□ 0.55
MSL3-213ENST00000476743 ASAP1Q9ULH1 1129 aa18.46■□□□□ 0.55
MSL3-213ENST00000476743 PNPLA7Q6ZV29 1317 aa18.46■□□□□ 0.55
MSL3-213ENST00000476743 MTFR1LQ9H019 292 aa18.45■□□□□ 0.54
MSL3-213ENST00000476743 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
MSL3-213ENST00000476743 U2SURPO15042 1029 aaKnown RBP18.44■□□□□ 0.54
MSL3-213ENST00000476743 SIK1P57059 783 aa18.44■□□□□ 0.54
MSL3-213ENST00000476743 MTHFSDQ2M296 383 aaKnown RBP18.44■□□□□ 0.54
MSL3-213ENST00000476743 CICQ96RK0 1608 aaPredicted RBP18.43■□□□□ 0.54
MSL3-213ENST00000476743 ZBTB7AO95365 584 aa18.43■□□□□ 0.54
MSL3-213ENST00000476743 PTGER2P43116 358 aa18.43■□□□□ 0.54
MSL3-213ENST00000476743 CABP4P57796 275 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms