RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
DFFA-203ENST00000476658 BCL9O00512 1426 aa20.34■□□□□ 0.85
DFFA-203ENST00000476658 EN1Q05925 392 aaPredicted RBP20.33■□□□□ 0.85
DFFA-203ENST00000476658 IGSF1Q8N6C5 1336 aa20.32■□□□□ 0.84
DFFA-203ENST00000476658 ACSBG1Q96GR2 724 aa20.32■□□□□ 0.84
DFFA-203ENST00000476658 PKD1L3Q7Z443 1732 aa20.32■□□□□ 0.84
DFFA-203ENST00000476658 BCL11BQ9C0K0 894 aaPredicted RBP20.31■□□□□ 0.84
DFFA-203ENST00000476658 NHSQ6T4R5 1651 aa20.31■□□□□ 0.84
DFFA-203ENST00000476658 IL13P35225 146 aa20.3■□□□□ 0.84
DFFA-203ENST00000476658 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
DFFA-203ENST00000476658 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
DFFA-203ENST00000476658 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
DFFA-203ENST00000476658 PTF1AQ7RTS3 328 aa20.29■□□□□ 0.84
DFFA-203ENST00000476658 KCNQ2O43526 872 aa20.28■□□□□ 0.84
DFFA-203ENST00000476658 DIAPH1O60610 1272 aaKnown RBP20.28■□□□□ 0.84
DFFA-203ENST00000476658 PPP2R1AP30153 589 aa20.28■□□□□ 0.84
DFFA-203ENST00000476658 EZH2Q15910 746 aaKnown RBP20.28■□□□□ 0.84
DFFA-203ENST00000476658 SPG7Q9UQ90 795 aa20.28■□□□□ 0.84
DFFA-203ENST00000476658 SULT6B1Q6IMI4 303 aa20.27■□□□□ 0.84
DFFA-203ENST00000476658 AEBP1Q8IUX7 1158 aa20.27■□□□□ 0.84
DFFA-203ENST00000476658 BTAF1O14981 1849 aa20.27■□□□□ 0.84
DFFA-203ENST00000476658 CFAP53Q96M91 514 aa20.26■□□□□ 0.83
DFFA-203ENST00000476658 CAMKK2Q96RR4 588 aa20.26■□□□□ 0.83
DFFA-203ENST00000476658 COL3A1P02461 1466 aaPredicted RBP20.25■□□□□ 0.83
DFFA-203ENST00000476658 SYTL4Q96C24 671 aaPredicted RBP20.25■□□□□ 0.83
DFFA-203ENST00000476658 RGPD3A6NKT7 1758 aaPredicted RBP20.25■□□□□ 0.83
DFFA-203ENST00000476658 RGPD4Q7Z3J3 1758 aa20.25■□□□□ 0.83
DFFA-203ENST00000476658 PARD3Q8TEW0 1356 aa20.24■□□□□ 0.83
DFFA-203ENST00000476658 RREB1Q92766 1687 aa20.24■□□□□ 0.83
DFFA-203ENST00000476658 CYP27B1O15528 508 aa20.24■□□□□ 0.83
DFFA-203ENST00000476658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.24■□□□□ 0.835e-7■□□□□ 9.3
DFFA-203ENST00000476658 KDRP35968 1356 aa20.22■□□□□ 0.83
DFFA-203ENST00000476658 U2SURPO15042 1029 aaKnown RBP20.22■□□□□ 0.83
DFFA-203ENST00000476658 HMOX1P09601 288 aa20.22■□□□□ 0.83
DFFA-203ENST00000476658 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
DFFA-203ENST00000476658 PLEKHO1Q53GL0 409 aaPredicted RBP20.22■□□□□ 0.83
DFFA-203ENST00000476658 PLEKHG2Q9H7P9 1386 aa20.21■□□□□ 0.83
DFFA-203ENST00000476658 ZNF316A6NFI3 1004 aaPredicted RBP20.21■□□□□ 0.83
DFFA-203ENST00000476658 PLSCR1O15162 318 aa20.21■□□□□ 0.83
DFFA-203ENST00000476658 NUP188Q5SRE5 1749 aa20.21■□□□□ 0.83
DFFA-203ENST00000476658 ITGB4P16144 1822 aa20.2■□□□□ 0.82
DFFA-203ENST00000476658 TOGARAM1Q9Y4F4 1720 aa20.2■□□□□ 0.82
DFFA-203ENST00000476658 IFNL2Q8IZJ0 200 aa20.2■□□□□ 0.82
DFFA-203ENST00000476658 RALBP1Q15311 655 aa20.19■□□□□ 0.82
DFFA-203ENST00000476658 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
DFFA-203ENST00000476658 PHKG2P15735 406 aa20.18■□□□□ 0.82
DFFA-203ENST00000476658 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
DFFA-203ENST00000476658 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
DFFA-203ENST00000476658 NKX1-1Q15270 411 aaPredicted RBP20.16■□□□□ 0.82
DFFA-203ENST00000476658 TXNRD1Q16881 649 aa20.15■□□□□ 0.82
DFFA-203ENST00000476658 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
DFFA-203ENST00000476658 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
DFFA-203ENST00000476658 PROM2Q8N271 834 aa20.14■□□□□ 0.81
DFFA-203ENST00000476658 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
DFFA-203ENST00000476658 NBPF14Q5TI25 921 aa20.13■□□□□ 0.81
DFFA-203ENST00000476658 VIRMAQ69YN4 1812 aaKnown RBP20.13■□□□□ 0.81
DFFA-203ENST00000476658 PSDA5PKW4 1024 aaPredicted RBP20.12■□□□□ 0.81
DFFA-203ENST00000476658 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
DFFA-203ENST00000476658 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
DFFA-203ENST00000476658 LY75O60449 1722 aa20.11■□□□□ 0.81
DFFA-203ENST00000476658 R3HDM1Q15032 1099 aaKnown RBP20.11■□□□□ 0.81
DFFA-203ENST00000476658 DCAF5Q96JK2 942 aa20.11■□□□□ 0.81
DFFA-203ENST00000476658 MYBBP1AQ9BQG0 1328 aaKnown RBP20.1■□□□□ 0.81
DFFA-203ENST00000476658 TMOD3Q9NYL9 352 aa20.1■□□□□ 0.81
DFFA-203ENST00000476658 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
DFFA-203ENST00000476658 KDM6AO15550 1401 aaPredicted RBP20.09■□□□□ 0.81
DFFA-203ENST00000476658 PRKAR2BP31323 418 aa20.08■□□□□ 0.81
DFFA-203ENST00000476658 MTHFSDQ2M296 383 aaKnown RBP20.08■□□□□ 0.81
DFFA-203ENST00000476658 AKAP4Q5JQC9 854 aa20.08■□□□□ 0.81
DFFA-203ENST00000476658 PIGBQ92521 554 aa20.08■□□□□ 0.81
DFFA-203ENST00000476658 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.81
DFFA-203ENST00000476658 PRKRIP1Q9H875 184 aaPredicted RBP20.08■□□□□ 0.81
DFFA-203ENST00000476658 ERVV-2B6SEH9 535 aa20.07■□□□□ 0.8
DFFA-203ENST00000476658 SLC27A3Q5K4L6 730 aa20.06■□□□□ 0.8
DFFA-203ENST00000476658 ANO8Q9HCE9 1232 aaPredicted RBP20.06■□□□□ 0.8
DFFA-203ENST00000476658 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
DFFA-203ENST00000476658 FCHSD2O94868 740 aa20.05■□□□□ 0.8
DFFA-203ENST00000476658 KCNQ4P56696 695 aa20.05■□□□□ 0.8
DFFA-203ENST00000476658 CABP4P57796 275 aa20.05■□□□□ 0.8
DFFA-203ENST00000476658 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
DFFA-203ENST00000476658 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
DFFA-203ENST00000476658 LRRC4BQ9NT99 713 aa20.05■□□□□ 0.8
DFFA-203ENST00000476658 STK32BQ9NY57 414 aa20.05■□□□□ 0.8
DFFA-203ENST00000476658 CCNL1Q9UK58 526 aaPredicted RBP20.05■□□□□ 0.8
DFFA-203ENST00000476658 PAPPAQ13219 1627 aa20.04■□□□□ 0.8
DFFA-203ENST00000476658 PHACTR3Q96KR7 559 aa20.03■□□□□ 0.8
DFFA-203ENST00000476658 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
DFFA-203ENST00000476658 TAF1LQ8IZX4 1826 aa20.02■□□□□ 0.79
DFFA-203ENST00000476658 MAP3K5Q99683 1374 aa20.01■□□□□ 0.79
DFFA-203ENST00000476658 RNMTO43148 476 aaKnown RBP20.01■□□□□ 0.79
DFFA-203ENST00000476658 NEFMP07197 916 aa20.01■□□□□ 0.79
DFFA-203ENST00000476658 SLC15A2Q16348 729 aa20.01■□□□□ 0.79
DFFA-203ENST00000476658 NFATC2IPQ8NCF5 419 aa20.01■□□□□ 0.79
DFFA-203ENST00000476658 LGR6Q9HBX8 967 aa20.01■□□□□ 0.79
DFFA-203ENST00000476658 C5P01031 1676 aa20■□□□□ 0.79
DFFA-203ENST00000476658 GNAT3A8MTJ3 354 aa20■□□□□ 0.79
DFFA-203ENST00000476658 ATG3Q9NT62 314 aa20■□□□□ 0.79
DFFA-203ENST00000476658 ADAMTS7Q9UKP4 1686 aa20■□□□□ 0.79
DFFA-203ENST00000476658 SLC52A2Q9HAB3 445 aa19.98■□□□□ 0.79
DFFA-203ENST00000476658 DLG5Q8TDM6 1919 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms