RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 ITGAEP38570 1179 aa12.16□□□□□ -0.46
CHD6-207ENST00000476641 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
CHD6-207ENST00000476641 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
CHD6-207ENST00000476641 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
CHD6-207ENST00000476641 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
CHD6-207ENST00000476641 SMCPP49901 116 aaPredicted RBP12.15□□□□□ -0.46
CHD6-207ENST00000476641 PRDM15P57071 1507 aaPredicted RBP12.15□□□□□ -0.46
CHD6-207ENST00000476641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHD6-207ENST00000476641 ADGRL2O95490 1459 aa12.14□□□□□ -0.47
CHD6-207ENST00000476641 CEP152O94986 1710 aa12.14□□□□□ -0.47
CHD6-207ENST00000476641 GRIPAP1Q4V328 841 aa12.14□□□□□ -0.47
CHD6-207ENST00000476641 PLA2R1Q13018 1463 aa12.14□□□□□ -0.47
CHD6-207ENST00000476641 WFS1O76024 890 aa12.13□□□□□ -0.47
CHD6-207ENST00000476641 SPATA31D1Q6ZQQ2 1576 aa12.13□□□□□ -0.47
CHD6-207ENST00000476641 WNT7AO00755 349 aa12.12□□□□□ -0.47
CHD6-207ENST00000476641 ANKRD50Q9ULJ7 1429 aa12.11□□□□□ -0.47
CHD6-207ENST00000476641 LTBP4Q8N2S1 1624 aa12.11□□□□□ -0.47
CHD6-207ENST00000476641 NLRP1Q9C000 1473 aa12.11□□□□□ -0.47
CHD6-207ENST00000476641 TRIM32Q13049 653 aa12.11□□□□□ -0.47
CHD6-207ENST00000476641 ZC3H13Q5T200 1668 aaKnown RBP12.1□□□□□ -0.47
CHD6-207ENST00000476641 UGGT1Q9NYU2 1555 aa12.1□□□□□ -0.47
CHD6-207ENST00000476641 SMPD1P17405 629 aa12.1□□□□□ -0.47
CHD6-207ENST00000476641 Q3C1V9 767 aa12.1□□□□□ -0.47
CHD6-207ENST00000476641 SNIP1Q8TAD8 396 aaKnown RBP12.1□□□□□ -0.47
CHD6-207ENST00000476641 DEPDC5O75140 1603 aa12.1□□□□□ -0.47
CHD6-207ENST00000476641 VWDEQ8N2E2 1590 aa12.09□□□□□ -0.47
CHD6-207ENST00000476641 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
CHD6-207ENST00000476641 KANK1Q14678 1352 aa12.09□□□□□ -0.47
CHD6-207ENST00000476641 GPIHBP1Q8IV16 184 aa12.09□□□□□ -0.47
CHD6-207ENST00000476641 ARHGAP31Q2M1Z3 1444 aa12.09□□□□□ -0.47
CHD6-207ENST00000476641 CFAP65Q6ZU64 1925 aaKnown RBP12.09□□□□□ -0.47
CHD6-207ENST00000476641 MMP16P51512 607 aa12.08□□□□□ -0.48
CHD6-207ENST00000476641 THEMISQ8N1K5 641 aaPredicted RBP12.08□□□□□ -0.48
CHD6-207ENST00000476641 ANKLE2Q86XL3 938 aa12.07□□□□□ -0.48
CHD6-207ENST00000476641 LMTK2Q8IWU2 1503 aa12.06□□□□□ -0.48
CHD6-207ENST00000476641 LTKP29376 864 aa12.06□□□□□ -0.48
CHD6-207ENST00000476641 MRGPRX2Q96LB1 330 aa12.06□□□□□ -0.48
CHD6-207ENST00000476641 ATP13A2Q9NQ11 1180 aa12.06□□□□□ -0.48
CHD6-207ENST00000476641 ROCK1Q13464 1354 aa12.05□□□□□ -0.48
CHD6-207ENST00000476641 NPHP4O75161 1426 aaPredicted RBP12.05□□□□□ -0.48
CHD6-207ENST00000476641 NFX1Q12986 1120 aaKnown RBP12.05□□□□□ -0.48
CHD6-207ENST00000476641 IDI1Q13907 227 aa12.05□□□□□ -0.48
CHD6-207ENST00000476641 EFCAB6Q5THR3 1501 aa12.05□□□□□ -0.48
CHD6-207ENST00000476641 SYNMO15061 1565 aa12.05□□□□□ -0.48
CHD6-207ENST00000476641 RRBP1Q9P2E9 1410 aaKnown RBP12.04□□□□□ -0.48
CHD6-207ENST00000476641 J3QL48 77 aa12.04□□□□□ -0.48
CHD6-207ENST00000476641 CD46P15529 392 aa12.04□□□□□ -0.48
CHD6-207ENST00000476641 USB1Q9BQ65 265 aaKnown RBP12.04□□□□□ -0.48
CHD6-207ENST00000476641 NOS1P29475 1434 aa12.03□□□□□ -0.48
CHD6-207ENST00000476641 DXOO77932 396 aaKnown RBP12.03□□□□□ -0.48
CHD6-207ENST00000476641 PIK3C2BO00750 1634 aa12.02□□□□□ -0.49
CHD6-207ENST00000476641 KDM4AO75164 1064 aa12.02□□□□□ -0.49
CHD6-207ENST00000476641 SNRPBP14678 240 aaKnown RBP12.02□□□□□ -0.49
CHD6-207ENST00000476641 TXNDC2Q86VQ3 553 aa12.02□□□□□ -0.49
CHD6-207ENST00000476641 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
CHD6-207ENST00000476641 MED14O60244 1454 aa12.02□□□□□ -0.49
CHD6-207ENST00000476641 POLR1AO95602 1720 aaPredicted RBP12.01□□□□□ -0.49
CHD6-207ENST00000476641 REPIN1Q9BWE0 567 aaKnown RBP12.01□□□□□ -0.49
CHD6-207ENST00000476641 NUP155O75694 1391 aa12.01□□□□□ -0.49
CHD6-207ENST00000476641 SCAF11Q99590 1463 aaKnown RBP12.01□□□□□ -0.49
CHD6-207ENST00000476641 ARHGAP23Q9P227 1491 aa12.01□□□□□ -0.49
CHD6-207ENST00000476641 UNC13BO14795 1591 aa12.01□□□□□ -0.49
CHD6-207ENST00000476641 CCDC24Q8N4L8 307 aa12□□□□□ -0.49
CHD6-207ENST00000476641 TMEM2Q9UHN6 1383 aa12□□□□□ -0.49
CHD6-207ENST00000476641 UBAP1LF5GYI3 381 aa11.99□□□□□ -0.49
CHD6-207ENST00000476641 HPS1Q92902 700 aa11.99□□□□□ -0.49
CHD6-207ENST00000476641 HLA-CQ95604 372 aa11.99□□□□□ -0.49
CHD6-207ENST00000476641 TRIM47Q96LD4 638 aa11.99□□□□□ -0.49
CHD6-207ENST00000476641 SENP2Q9HC62 589 aa11.99□□□□□ -0.49
CHD6-207ENST00000476641 SLIT1O75093 1534 aa11.98□□□□□ -0.49
CHD6-207ENST00000476641 WIPF1O43516 503 aa11.98□□□□□ -0.49
CHD6-207ENST00000476641 STK17AQ9UEE5 414 aa11.98□□□□□ -0.49
CHD6-207ENST00000476641 IQGAP1P46940 1657 aa11.97□□□□□ -0.49
CHD6-207ENST00000476641 NAIPQ13075 1403 aa11.97□□□□□ -0.49
CHD6-207ENST00000476641 RC3H1Q5TC82 1133 aaKnown RBP11.97□□□□□ -0.49
CHD6-207ENST00000476641 NUTM2DQ5VT03 806 aaPredicted RBP11.97□□□□□ -0.49
CHD6-207ENST00000476641 TET3O43151 1660 aa11.97□□□□□ -0.49
CHD6-207ENST00000476641 ADGRB3O60242 1522 aa11.96□□□□□ -0.49
CHD6-207ENST00000476641 USP46P62068 366 aa11.96□□□□□ -0.49
CHD6-207ENST00000476641 PLCB2Q00722 1185 aa11.96□□□□□ -0.49
CHD6-207ENST00000476641 INSM1Q01101 510 aaPredicted RBP11.96□□□□□ -0.49
CHD6-207ENST00000476641 MAP2K5Q13163 448 aa11.96□□□□□ -0.49
CHD6-207ENST00000476641 IQSEC2Q5JU85 1478 aa11.95□□□□□ -0.5
CHD6-207ENST00000476641 RPRD2Q5VT52 1461 aaKnown RBP11.95□□□□□ -0.5
CHD6-207ENST00000476641 TERTO14746 1132 aaKnown RBP11.95□□□□□ -0.5
CHD6-207ENST00000476641 SKOR1P84550 965 aa11.95□□□□□ -0.5
CHD6-207ENST00000476641 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
CHD6-207ENST00000476641 SLC26A8Q96RN1 970 aa11.95□□□□□ -0.5
CHD6-207ENST00000476641 SLC52A1Q9NWF4 448 aa11.95□□□□□ -0.5
CHD6-207ENST00000476641 EID1Q9Y6B2 187 aa11.95□□□□□ -0.5
CHD6-207ENST00000476641 IQGAP3Q86VI3 1631 aa11.95□□□□□ -0.5
CHD6-207ENST00000476641 STRCP1A6NGW2 1772 aa11.95□□□□□ -0.5
CHD6-207ENST00000476641 E9PCH4 1651 aa11.94□□□□□ -0.5
CHD6-207ENST00000476641 WNT7BP56706 349 aa11.94□□□□□ -0.5
CHD6-207ENST00000476641 LCE2CQ5TA81 110 aa11.94□□□□□ -0.5
CHD6-207ENST00000476641 CPS1P31327 1500 aa11.93□□□□□ -0.5
CHD6-207ENST00000476641 HOXA2O43364 376 aa11.93□□□□□ -0.5
CHD6-207ENST00000476641 PIP4K2BP78356 416 aa11.93□□□□□ -0.5
CHD6-207ENST00000476641 ZFYVE9O95405 1425 aa11.93□□□□□ -0.5
CHD6-207ENST00000476641 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms