RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TNNT3P45378 269 aaPredicted RBP5.13□□□□□ -1.59
CD55-208ENST00000476590 GTF2A1P52655 376 aaPredicted RBP5.13□□□□□ -1.59
CD55-208ENST00000476590 PDE4DQ08499 809 aa5.13□□□□□ -1.59
CD55-208ENST00000476590 HS1BP3Q53T59 392 aa5.13□□□□□ -1.59
CD55-208ENST00000476590 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.13□□□□□ -1.59
CD55-208ENST00000476590 CCDC97Q96F63 343 aaPredicted RBP5.13□□□□□ -1.59
CD55-208ENST00000476590 PPP1R9BQ96SB3 815 aa5.13□□□□□ -1.59
CD55-208ENST00000476590 KIF16BQ96L93 1317 aa5.13□□□□□ -1.59
CD55-208ENST00000476590 SMARCA2P51531 1590 aa5.13□□□□□ -1.59
CD55-208ENST00000476590 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.12□□□□□ -1.59
CD55-208ENST00000476590 ZKSCAN8Q15776 578 aaPredicted RBP5.12□□□□□ -1.59
CD55-208ENST00000476590 ATP2B3Q16720 1220 aa5.12□□□□□ -1.59
CD55-208ENST00000476590 BRMS1Q9HCU9 246 aa5.12□□□□□ -1.59
CD55-208ENST00000476590 KIF1CO43896 1103 aaKnown RBP5.12□□□□□ -1.59
CD55-208ENST00000476590 MLECQ14165 292 aa5.12□□□□□ -1.59
CD55-208ENST00000476590 SPATA32Q96LK8 384 aa5.12□□□□□ -1.59
CD55-208ENST00000476590 AMOTL2Q9Y2J4 779 aa5.12□□□□□ -1.59
CD55-208ENST00000476590 TRIM66O15016 1216 aa5.11□□□□□ -1.59
CD55-208ENST00000476590 PROCP04070 461 aa5.11□□□□□ -1.59
CD55-208ENST00000476590 DONSONQ9NYP3 566 aa5.11□□□□□ -1.59
CD55-208ENST00000476590 STK26Q9P289 416 aa5.11□□□□□ -1.59
CD55-208ENST00000476590 SERPINA10Q9UK55 444 aa5.11□□□□□ -1.59
CD55-208ENST00000476590 AKNAQ7Z591 1439 aa5.11□□□□□ -1.59
CD55-208ENST00000476590 ARID4AP29374 1257 aaPredicted RBP5.11□□□□□ -1.59
CD55-208ENST00000476590 NOL8Q76FK4 1167 aaKnown RBP5.11□□□□□ -1.59
CD55-208ENST00000476590 FNBP4Q8N3X1 1017 aaPredicted RBP5.11□□□□□ -1.59
CD55-208ENST00000476590 MYRIPQ8NFW9 859 aa5.11□□□□□ -1.59
CD55-208ENST00000476590 FEZ2Q9UHY8 353 aaPredicted RBP5.11□□□□□ -1.59
CD55-208ENST00000476590 STK25O00506 426 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 CALRP27797 417 aaKnown RBP5.1□□□□□ -1.59
CD55-208ENST00000476590 MCM5P33992 734 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 NOP2P46087 812 aaKnown RBP5.1□□□□□ -1.59
CD55-208ENST00000476590 FZD5Q13467 585 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 PROSER2Q86WR7 435 aaPredicted RBP5.1□□□□□ -1.59
CD55-208ENST00000476590 MNS1Q8NEH6 495 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 SGSM3Q96HU1 749 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 SLC26A8Q96RN1 970 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 FEZ1Q99689 392 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 KIAA1522Q9P206 1035 aaPredicted RBP5.1□□□□□ -1.59
CD55-208ENST00000476590 NUDCQ9Y266 331 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 RIPOR2Q9Y4F9 1068 aa5.1□□□□□ -1.59
CD55-208ENST00000476590 MARCH6O60337 910 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 ZNF853P0CG23 659 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 TDO2P48775 406 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 RGL3Q3MIN7 710 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 ICE2Q659A1 982 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 MRVI1Q9Y6F6 885 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 GUCY2CP25092 1073 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 MCM4P33991 863 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 GTF2F1P35269 517 aaKnown RBP eCLIP5.09□□□□□ -1.595e-8■■□□□ 14.5
CD55-208ENST00000476590 HMGN5P82970 282 aaKnown RBP5.09□□□□□ -1.59
CD55-208ENST00000476590 ZNF662Q6ZS27 426 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 CREBRFQ8IUR6 639 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.09□□□□□ -1.59
CD55-208ENST00000476590 FAM9BQ8IZU0 186 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 OGFRQ9NZT2 677 aa5.09□□□□□ -1.59
CD55-208ENST00000476590 NOL7Q9UMY1 257 aaKnown RBP5.09□□□□□ -1.59
CD55-208ENST00000476590 WDR97A6NE52 1622 aa5.09□□□□□ -1.6
CD55-208ENST00000476590 SLFN14P0C7P3 912 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 MCM6Q14566 821 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 KRI1Q8N9T8 703 aaKnown RBP5.08□□□□□ -1.6
CD55-208ENST00000476590 ITFG2Q969R8 447 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 PRIMPOLQ96LW4 560 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 UPF2Q9HAU5 1272 aaKnown RBP5.08□□□□□ -1.6
CD55-208ENST00000476590 RAD50Q92878 1312 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 DHX16O60231 1041 aaKnown RBP5.08□□□□□ -1.6
CD55-208ENST00000476590 ZPR1O75312 459 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 TXKP42681 527 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 FAM50AQ14320 339 aaKnown RBP5.08□□□□□ -1.6
CD55-208ENST00000476590 CCDC96Q2M329 555 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 FAM161AQ3B820 660 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 ANKRD13AQ8IZ07 590 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 TMTC2Q8N394 836 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 PDCL2Q8N4E4 241 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 ZNF513Q8N8E2 541 aaPredicted RBP5.08□□□□□ -1.6
CD55-208ENST00000476590 MED4Q9NPJ6 270 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 RSPH14Q9UHP6 348 aa5.08□□□□□ -1.6
CD55-208ENST00000476590 VIRMAQ69YN4 1812 aaKnown RBP5.07□□□□□ -1.6
CD55-208ENST00000476590 BAG6P46379 1132 aa5.07□□□□□ -1.6
CD55-208ENST00000476590 XPCQ01831 940 aaPredicted RBP5.07□□□□□ -1.6
CD55-208ENST00000476590 HSP90AB4PQ58FF6 505 aa5.07□□□□□ -1.6
CD55-208ENST00000476590 PLPP6Q8IY26 295 aa5.07□□□□□ -1.6
CD55-208ENST00000476590 CALR3Q96L12 384 aaKnown RBP5.07□□□□□ -1.6
CD55-208ENST00000476590 UNC13AQ9UPW8 1703 aa5.07□□□□□ -1.6
CD55-208ENST00000476590 TTC24A2A3L6 582 aaPredicted RBP5.06□□□□□ -1.6
CD55-208ENST00000476590 DDX11L8A8MPP1 907 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 MTA1Q13330 715 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 RBM26Q5T8P6 1007 aaKnown RBP5.06□□□□□ -1.6
CD55-208ENST00000476590 TSHZ1Q6ZSZ6 1077 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 EXOC8Q8IYI6 725 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 ARHGEF1Q92888 912 aaKnown RBP5.06□□□□□ -1.6
CD55-208ENST00000476590 FAM210AQ96ND0 272 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 RASSF4Q9H2L5 321 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 ANTXR1Q9H6X2 564 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 TNIKQ9UKE5 1360 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 MPHOSPH10O00566 681 aaKnown RBP5.06□□□□□ -1.6
CD55-208ENST00000476590 PPP1R12AO14974 1030 aaPredicted RBP5.06□□□□□ -1.6
CD55-208ENST00000476590 RINLQ6ZS11 566 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 BORCS6Q96GS4 357 aa5.06□□□□□ -1.6
CD55-208ENST00000476590 PANK3Q9H999 370 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms