RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 HDGFL2Q7Z4V5 671 aaPredicted RBP15.69■□□□□ 0.1
EXOSC1-208ENST00000476234 SLC12A5Q9H2X9 1139 aa15.69■□□□□ 0.1
EXOSC1-208ENST00000476234 NSD2O96028 1365 aa15.69■□□□□ 0.1
EXOSC1-208ENST00000476234 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
EXOSC1-208ENST00000476234 TUBGCP6Q96RT7 1819 aa15.68■□□□□ 0.1
EXOSC1-208ENST00000476234 A0A1W2PP64 1363 aa15.68■□□□□ 0.1
EXOSC1-208ENST00000476234 POLD1P28340 1107 aa15.68■□□□□ 0.1
EXOSC1-208ENST00000476234 DDX54Q8TDD1 881 aaKnown RBP15.68■□□□□ 0.1
EXOSC1-208ENST00000476234 TERF2IPQ9NYB0 399 aa15.67■□□□□ 0.1
EXOSC1-208ENST00000476234 SHANK3Q9BYB0 1731 aa15.66■□□□□ 0.1
EXOSC1-208ENST00000476234 PRIM1P49642 420 aaKnown RBP15.66■□□□□ 0.1
EXOSC1-208ENST00000476234 TMC1Q8TDI8 760 aa15.66■□□□□ 0.1
EXOSC1-208ENST00000476234 TFCP2L1Q9NZI6 479 aa15.66■□□□□ 0.1
EXOSC1-208ENST00000476234 NLGN2Q8NFZ4 835 aa15.65■□□□□ 0.1
EXOSC1-208ENST00000476234 DOT1LQ8TEK3 1739 aa15.65■□□□□ 0.1
EXOSC1-208ENST00000476234 GIGYF1O75420 1035 aaPredicted RBP15.64■□□□□ 0.09
EXOSC1-208ENST00000476234 KCNQ4P56696 695 aa15.64■□□□□ 0.09
EXOSC1-208ENST00000476234 TESK2Q96S53 571 aa15.64■□□□□ 0.09
EXOSC1-208ENST00000476234 GOLGB1Q14789 3259 aaKnown RBP15.64■□□□□ 0.09
EXOSC1-208ENST00000476234 KAT6BQ8WYB5 2073 aa15.64■□□□□ 0.09
EXOSC1-208ENST00000476234 MAP3K19Q56UN5 1328 aa15.63■□□□□ 0.09
EXOSC1-208ENST00000476234 MEGF6O75095 1541 aa15.63■□□□□ 0.09
EXOSC1-208ENST00000476234 GRIN3BO60391 1043 aa15.62■□□□□ 0.09
EXOSC1-208ENST00000476234 YBX3P16989 372 aaKnown RBP eCLIP15.62■□□□□ 0.09
EXOSC1-208ENST00000476234 HOXC9P31274 260 aa15.62■□□□□ 0.09
EXOSC1-208ENST00000476234 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
EXOSC1-208ENST00000476234 ZCRB1Q8TBF4 217 aaKnown RBP15.62■□□□□ 0.09
EXOSC1-208ENST00000476234 LTV1Q96GA3 475 aaPredicted RBP15.62■□□□□ 0.09
EXOSC1-208ENST00000476234 ST20-MTHFSA0A0A6YYL1 179 aa15.61■□□□□ 0.09
EXOSC1-208ENST00000476234 COL23A1Q86Y22 540 aaPredicted RBP15.61■□□□□ 0.09
EXOSC1-208ENST00000476234 SYTL4Q96C24 671 aaPredicted RBP15.61■□□□□ 0.09
EXOSC1-208ENST00000476234 CCNL1Q9UK58 526 aaPredicted RBP15.61■□□□□ 0.09
EXOSC1-208ENST00000476234 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
EXOSC1-208ENST00000476234 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
EXOSC1-208ENST00000476234 COG3Q96JB2 828 aa15.59■□□□□ 0.09
EXOSC1-208ENST00000476234 CGNL1Q0VF96 1302 aa15.59■□□□□ 0.09
EXOSC1-208ENST00000476234 RTL1A6NKG5 1358 aa15.59■□□□□ 0.09
EXOSC1-208ENST00000476234 USP47Q96K76 1375 aa15.58■□□□□ 0.08
EXOSC1-208ENST00000476234 FBLN1P23142 703 aa15.57■□□□□ 0.08
EXOSC1-208ENST00000476234 AMPHP49418 695 aa15.57■□□□□ 0.08
EXOSC1-208ENST00000476234 IFFO2Q5TF58 517 aa15.57■□□□□ 0.08
EXOSC1-208ENST00000476234 NBPF6Q5VWK0 638 aa15.57■□□□□ 0.08
EXOSC1-208ENST00000476234 NBPF4Q96M43 638 aa15.57■□□□□ 0.08
EXOSC1-208ENST00000476234 CD2APQ9Y5K6 639 aa15.57■□□□□ 0.08
EXOSC1-208ENST00000476234 C5P01031 1676 aa15.56■□□□□ 0.08
EXOSC1-208ENST00000476234 ATP10DQ9P241 1426 aa15.55■□□□□ 0.08
EXOSC1-208ENST00000476234 HMGB2P26583 209 aaKnown RBP15.55■□□□□ 0.08
EXOSC1-208ENST00000476234 CEP350Q5VT06 3117 aa15.54■□□□□ 0.08
EXOSC1-208ENST00000476234 ADCY9O60503 1353 aa15.54■□□□□ 0.08
EXOSC1-208ENST00000476234 FLAD1Q8NFF5 587 aa15.54■□□□□ 0.08
EXOSC1-208ENST00000476234 TAF1LQ8IZX4 1826 aa15.53■□□□□ 0.08
EXOSC1-208ENST00000476234 SLC24A1O60721 1099 aa15.53■□□□□ 0.08
EXOSC1-208ENST00000476234 FYB1O15117 783 aa15.52■□□□□ 0.08
EXOSC1-208ENST00000476234 MSL1Q68DK7 614 aa15.52■□□□□ 0.08
EXOSC1-208ENST00000476234 RAPGEF4Q8WZA2 1011 aa15.52■□□□□ 0.08
EXOSC1-208ENST00000476234 INSRP06213 1382 aa15.51■□□□□ 0.07
EXOSC1-208ENST00000476234 PALLDQ8WX93 1383 aa15.51■□□□□ 0.07
EXOSC1-208ENST00000476234 PCDH11XQ9BZA7 1347 aa15.51■□□□□ 0.07
EXOSC1-208ENST00000476234 PCDH11YQ9BZA8 1340 aa15.51■□□□□ 0.07
EXOSC1-208ENST00000476234 RRS1Q15050 365 aaKnown RBP15.51■□□□□ 0.07
EXOSC1-208ENST00000476234 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
EXOSC1-208ENST00000476234 KIF24Q5T7B8 1368 aa15.5■□□□□ 0.07
EXOSC1-208ENST00000476234 TOGARAM1Q9Y4F4 1720 aa15.5■□□□□ 0.07
EXOSC1-208ENST00000476234 SMG6Q86US8 1419 aaKnown RBP15.5■□□□□ 0.07
EXOSC1-208ENST00000476234 C4BP0C0L5 1744 aa15.49■□□□□ 0.07
EXOSC1-208ENST00000476234 CYP27B1O15528 508 aa15.49■□□□□ 0.07
EXOSC1-208ENST00000476234 TATP17735 454 aaPredicted RBP15.49■□□□□ 0.07
EXOSC1-208ENST00000476234 NCAPD2Q15021 1401 aa15.49■□□□□ 0.07
EXOSC1-208ENST00000476234 HSP90AB2PQ58FF8 381 aa15.48■□□□□ 0.07
EXOSC1-208ENST00000476234 AMIGO3Q86WK7 504 aa15.48■□□□□ 0.07
EXOSC1-208ENST00000476234 GGNBP2Q9H3C7 697 aa15.48■□□□□ 0.07
EXOSC1-208ENST00000476234 GPBP1L1Q9HC44 474 aaPredicted RBP15.48■□□□□ 0.07
EXOSC1-208ENST00000476234 FLT4P35916 1363 aa15.48■□□□□ 0.07
EXOSC1-208ENST00000476234 NKX1-1Q15270 411 aaPredicted RBP15.47■□□□□ 0.07
EXOSC1-208ENST00000476234 MPRIPQ6WCQ1 1025 aa15.47■□□□□ 0.07
EXOSC1-208ENST00000476234 UBR3Q6ZT12 1888 aa15.47■□□□□ 0.07
EXOSC1-208ENST00000476234 PKD1L3Q7Z443 1732 aa15.47■□□□□ 0.07
EXOSC1-208ENST00000476234 SMARCC1Q92922 1105 aaPredicted RBP15.47■□□□□ 0.07
EXOSC1-208ENST00000476234 MAP2P11137 1827 aaKnown RBP15.46■□□□□ 0.07
EXOSC1-208ENST00000476234 ITGB4P16144 1822 aa15.46■□□□□ 0.07
EXOSC1-208ENST00000476234 HSPA6P17066 643 aa15.46■□□□□ 0.07
EXOSC1-208ENST00000476234 CLSPNQ9HAW4 1339 aa15.45■□□□□ 0.06
EXOSC1-208ENST00000476234 NSD3Q9BZ95 1437 aa15.45■□□□□ 0.06
EXOSC1-208ENST00000476234 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.44■□□□□ 0.06
EXOSC1-208ENST00000476234 PIGBQ92521 554 aa15.44■□□□□ 0.06
EXOSC1-208ENST00000476234 AK7Q96M32 723 aa15.44■□□□□ 0.06
EXOSC1-208ENST00000476234 TIMELESSQ9UNS1 1208 aa15.44■□□□□ 0.06
EXOSC1-208ENST00000476234 IGSF1Q8N6C5 1336 aa15.43■□□□□ 0.06
EXOSC1-208ENST00000476234 CICQ96RK0 1608 aaPredicted RBP15.43■□□□□ 0.06
EXOSC1-208ENST00000476234 SSFA2P28290 1259 aa15.43■□□□□ 0.06
EXOSC1-208ENST00000476234 TMF1P82094 1093 aa15.43■□□□□ 0.06
EXOSC1-208ENST00000476234 CARD14Q9BXL6 1004 aa15.42■□□□□ 0.06
EXOSC1-208ENST00000476234 KIF20BQ96Q89 1820 aa15.42■□□□□ 0.06
EXOSC1-208ENST00000476234 LOC102724428A0A0B4J2F2 783 aa15.41■□□□□ 0.06
EXOSC1-208ENST00000476234 KIF3CO14782 793 aa15.41■□□□□ 0.06
EXOSC1-208ENST00000476234 SIK1P57059 783 aa15.41■□□□□ 0.06
EXOSC1-208ENST00000476234 SMIM5Q71RC9 77 aa15.41■□□□□ 0.06
EXOSC1-208ENST00000476234 LINC00116Q8NCU8 138 aa15.41■□□□□ 0.06
EXOSC1-208ENST00000476234 ANKRD26Q9UPS8 1709 aa15.4■□□□□ 0.06
EXOSC1-208ENST00000476234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms