RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
SATB1-213ENST00000476178 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
SATB1-213ENST00000476178 TATP17735 454 aaPredicted RBP11.67□□□□□ -0.54
SATB1-213ENST00000476178 HSP90AB2PQ58FF8 381 aa11.67□□□□□ -0.54
SATB1-213ENST00000476178 TFCP2L1Q9NZI6 479 aa11.67□□□□□ -0.54
SATB1-213ENST00000476178 MYOM1P52179 1685 aa11.67□□□□□ -0.54
SATB1-213ENST00000476178 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
SATB1-213ENST00000476178 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
SATB1-213ENST00000476178 KCNQ4P56696 695 aa11.66□□□□□ -0.54
SATB1-213ENST00000476178 ZNF827Q17R98 1081 aa11.66□□□□□ -0.54
SATB1-213ENST00000476178 FHDC1Q9C0D6 1143 aaPredicted RBP11.66□□□□□ -0.54
SATB1-213ENST00000476178 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
SATB1-213ENST00000476178 MSH5O43196 834 aa11.65□□□□□ -0.54
SATB1-213ENST00000476178 KLHL34Q8N239 644 aa11.65□□□□□ -0.54
SATB1-213ENST00000476178 ARXQ96QS3 562 aa11.65□□□□□ -0.54
SATB1-213ENST00000476178 SYT17Q9BSW7 474 aa11.65□□□□□ -0.54
SATB1-213ENST00000476178 NSD3Q9BZ95 1437 aa11.65□□□□□ -0.54
SATB1-213ENST00000476178 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
SATB1-213ENST00000476178 POLD1P28340 1107 aa11.64□□□□□ -0.55
SATB1-213ENST00000476178 AKT1S1Q96B36 256 aa11.64□□□□□ -0.55
SATB1-213ENST00000476178 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
SATB1-213ENST00000476178 EMILIN1Q9Y6C2 1016 aa11.64□□□□□ -0.55
SATB1-213ENST00000476178 BTAF1O14981 1849 aa11.64□□□□□ -0.55
SATB1-213ENST00000476178 FAM208AQ9UK61 1670 aaKnown RBP11.64□□□□□ -0.55
SATB1-213ENST00000476178 INSRP06213 1382 aa11.64□□□□□ -0.55
SATB1-213ENST00000476178 FLT4P35916 1363 aa11.64□□□□□ -0.55
SATB1-213ENST00000476178 MEGF6O75095 1541 aa11.63□□□□□ -0.55
SATB1-213ENST00000476178 PCDH11XQ9BZA7 1347 aa11.62□□□□□ -0.55
SATB1-213ENST00000476178 PCDH11YQ9BZA8 1340 aa11.62□□□□□ -0.55
SATB1-213ENST00000476178 MPRIPQ6WCQ1 1025 aa11.62□□□□□ -0.55
SATB1-213ENST00000476178 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
SATB1-213ENST00000476178 SGIP1Q9BQI5 828 aa11.62□□□□□ -0.55
SATB1-213ENST00000476178 KIF24Q5T7B8 1368 aa11.62□□□□□ -0.55
SATB1-213ENST00000476178 KIF20BQ96Q89 1820 aa11.61□□□□□ -0.55
SATB1-213ENST00000476178 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
SATB1-213ENST00000476178 RGPD2P0DJD1 1756 aa11.61□□□□□ -0.55
SATB1-213ENST00000476178 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
SATB1-213ENST00000476178 HMGB2P26583 209 aaKnown RBP11.6□□□□□ -0.55
SATB1-213ENST00000476178 GPR162Q16538 588 aa11.6□□□□□ -0.55
SATB1-213ENST00000476178 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
SATB1-213ENST00000476178 PANK3Q9H999 370 aa11.6□□□□□ -0.55
SATB1-213ENST00000476178 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
SATB1-213ENST00000476178 CYP27B1O15528 508 aa11.59□□□□□ -0.55
SATB1-213ENST00000476178 POLKQ9UBT6 870 aa11.59□□□□□ -0.55
SATB1-213ENST00000476178 WASHC2AQ641Q2 1341 aa11.59□□□□□ -0.55
SATB1-213ENST00000476178 NSD2O96028 1365 aa11.58□□□□□ -0.56
SATB1-213ENST00000476178 SMARCC1Q92922 1105 aaPredicted RBP11.58□□□□□ -0.56
SATB1-213ENST00000476178 PAPPAQ13219 1627 aa11.57□□□□□ -0.56
SATB1-213ENST00000476178 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
SATB1-213ENST00000476178 EYA1Q99502 592 aa11.57□□□□□ -0.56
SATB1-213ENST00000476178 DOT1LQ8TEK3 1739 aa11.57□□□□□ -0.56
SATB1-213ENST00000476178 PALLDQ8WX93 1383 aa11.56□□□□□ -0.56
SATB1-213ENST00000476178 MSL1Q68DK7 614 aa11.56□□□□□ -0.56
SATB1-213ENST00000476178 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
SATB1-213ENST00000476178 PIGBQ92521 554 aa11.55□□□□□ -0.56
SATB1-213ENST00000476178 AK7Q96M32 723 aa11.55□□□□□ -0.56
SATB1-213ENST00000476178 TMOD3Q9NYL9 352 aa11.55□□□□□ -0.56
SATB1-213ENST00000476178 KIF7Q2M1P5 1343 aa11.55□□□□□ -0.56
SATB1-213ENST00000476178 SHANK3Q9BYB0 1731 aa11.55□□□□□ -0.56
SATB1-213ENST00000476178 NCAPD2Q15021 1401 aa11.54□□□□□ -0.56
SATB1-213ENST00000476178 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
SATB1-213ENST00000476178 IFNL2Q8IZJ0 200 aa11.54□□□□□ -0.56
SATB1-213ENST00000476178 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.56
SATB1-213ENST00000476178 ANKRD26Q9UPS8 1709 aa11.54□□□□□ -0.56
SATB1-213ENST00000476178 MAP3K5Q99683 1374 aa11.54□□□□□ -0.56
SATB1-213ENST00000476178 PHF14O94880 888 aa11.53□□□□□ -0.56
SATB1-213ENST00000476178 NKX1-1Q15270 411 aaPredicted RBP11.53□□□□□ -0.56
SATB1-213ENST00000476178 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
SATB1-213ENST00000476178 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
SATB1-213ENST00000476178 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
SATB1-213ENST00000476178 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
SATB1-213ENST00000476178 NLGN2Q8NFZ4 835 aa11.52□□□□□ -0.57
SATB1-213ENST00000476178 KNSTRNQ9Y448 316 aa11.52□□□□□ -0.57
SATB1-213ENST00000476178 LY75O60449 1722 aa11.52□□□□□ -0.57
SATB1-213ENST00000476178 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
SATB1-213ENST00000476178 PHKG2P15735 406 aa11.51□□□□□ -0.57
SATB1-213ENST00000476178 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
SATB1-213ENST00000476178 SIK1P57059 783 aa11.51□□□□□ -0.57
SATB1-213ENST00000476178 PLEKHO1Q53GL0 409 aaPredicted RBP11.51□□□□□ -0.57
SATB1-213ENST00000476178 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
SATB1-213ENST00000476178 ASAP1Q9ULH1 1129 aa11.51□□□□□ -0.57
SATB1-213ENST00000476178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
SATB1-213ENST00000476178 GNPATO15228 680 aa11.49□□□□□ -0.57
SATB1-213ENST00000476178 GRIN3BO60391 1043 aa11.49□□□□□ -0.57
SATB1-213ENST00000476178 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
SATB1-213ENST00000476178 SMIM5Q71RC9 77 aa11.49□□□□□ -0.57
SATB1-213ENST00000476178 RBM42Q9BTD8 480 aaKnown RBP11.49□□□□□ -0.57
SATB1-213ENST00000476178 QSER1Q2KHR3 1735 aa11.49□□□□□ -0.57
SATB1-213ENST00000476178 CABP4P57796 275 aa11.48□□□□□ -0.57
SATB1-213ENST00000476178 ZNF530Q6P9A1 599 aaPredicted RBP11.48□□□□□ -0.57
SATB1-213ENST00000476178 LINC00116Q8NCU8 138 aa11.48□□□□□ -0.57
SATB1-213ENST00000476178 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
SATB1-213ENST00000476178 CD2APQ9Y5K6 639 aa11.48□□□□□ -0.57
SATB1-213ENST00000476178 IGSF1Q8N6C5 1336 aa11.48□□□□□ -0.57
SATB1-213ENST00000476178 TUBGCP6Q96RT7 1819 aa11.48□□□□□ -0.57
SATB1-213ENST00000476178 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
SATB1-213ENST00000476178 ERVV-2B6SEH9 535 aa11.47□□□□□ -0.57
SATB1-213ENST00000476178 SSFA2P28290 1259 aa11.47□□□□□ -0.57
SATB1-213ENST00000476178 MTHFSP49914 203 aa11.47□□□□□ -0.57
SATB1-213ENST00000476178 ITPK1Q13572 414 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms