RNA–Protein interactions for RNA: ENST00000476015.1

LAMP3-204, Transcript of lysosomal associated membrane protein 3, humanhuman

TSL 4

Gene LAMP3, Length 835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-204ENST00000476015 QTRT2Q9H974 415 aaKnown RBP23.45■■□□□ 1.34
LAMP3-204ENST00000476015 NEFLP07196 543 aa23.44■■□□□ 1.34
LAMP3-204ENST00000476015 RBM6P78332 1123 aaKnown RBP23.44■■□□□ 1.34
LAMP3-204ENST00000476015 RGPD5Q99666 1765 aa23.44■■□□□ 1.34
LAMP3-204ENST00000476015 NCAPD2Q15021 1401 aa23.43■■□□□ 1.34
LAMP3-204ENST00000476015 RAPGEF4Q8WZA2 1011 aa23.43■■□□□ 1.34
LAMP3-204ENST00000476015 COL22A1Q8NFW1 1626 aaPredicted RBP23.43■■□□□ 1.34
LAMP3-204ENST00000476015 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
LAMP3-204ENST00000476015 GNAT3A8MTJ3 354 aa23.42■■□□□ 1.34
LAMP3-204ENST00000476015 GNAI1P63096 354 aa23.42■■□□□ 1.34
LAMP3-204ENST00000476015 C8orf37Q96NL8 207 aa23.42■■□□□ 1.34
LAMP3-204ENST00000476015 TATP17735 454 aaPredicted RBP23.41■■□□□ 1.34
LAMP3-204ENST00000476015 TOM1L2Q6ZVM7 507 aa23.41■■□□□ 1.34
LAMP3-204ENST00000476015 IFT57Q9NWB7 429 aa23.4■■□□□ 1.34
LAMP3-204ENST00000476015 CAMTA1Q9Y6Y1 1673 aa23.4■■□□□ 1.34
LAMP3-204ENST00000476015 ABCA3Q99758 1704 aa23.39■■□□□ 1.34
LAMP3-204ENST00000476015 CARD10Q9BWT7 1032 aa23.39■■□□□ 1.33
LAMP3-204ENST00000476015 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
LAMP3-204ENST00000476015 RGPD2P0DJD1 1756 aa23.38■■□□□ 1.33
LAMP3-204ENST00000476015 CFAP44Q96MT7 982 aa23.38■■□□□ 1.33
LAMP3-204ENST00000476015 THUMPD2Q9BTF0 503 aaKnown RBP23.38■■□□□ 1.33
LAMP3-204ENST00000476015 BTG4Q9NY30 223 aa23.38■■□□□ 1.33
LAMP3-204ENST00000476015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.38■■□□□ 1.33
LAMP3-204ENST00000476015 CT47B1P0C2W7 299 aaPredicted RBP23.37■■□□□ 1.33
LAMP3-204ENST00000476015 ZNF853P0CG23 659 aa23.37■■□□□ 1.33
LAMP3-204ENST00000476015 DCTN1Q14203 1278 aa23.37■■□□□ 1.33
LAMP3-204ENST00000476015 STRN4Q9NRL3 753 aa23.37■■□□□ 1.33
LAMP3-204ENST00000476015 SPG7Q9UQ90 795 aa23.37■■□□□ 1.33
LAMP3-204ENST00000476015 AKAP4Q5JQC9 854 aa23.36■■□□□ 1.33
LAMP3-204ENST00000476015 MCM10Q7L590 875 aa23.36■■□□□ 1.33
LAMP3-204ENST00000476015 PLEKHG2Q9H7P9 1386 aa23.36■■□□□ 1.33
LAMP3-204ENST00000476015 RNF123Q5XPI4 1314 aa23.35■■□□□ 1.33
LAMP3-204ENST00000476015 DLG5Q8TDM6 1919 aa23.35■■□□□ 1.33
LAMP3-204ENST00000476015 LMO7Q8WWI1 1683 aa23.35■■□□□ 1.33
LAMP3-204ENST00000476015 FAM208AQ9UK61 1670 aaKnown RBP23.35■■□□□ 1.33
LAMP3-204ENST00000476015 ADAMTS2O95450 1211 aa23.35■■□□□ 1.33
LAMP3-204ENST00000476015 C1orf141Q5JVX7 400 aa23.35■■□□□ 1.33
LAMP3-204ENST00000476015 ZNF530Q6P9A1 599 aaPredicted RBP23.35■■□□□ 1.33
LAMP3-204ENST00000476015 MAP3K5Q99683 1374 aa23.35■■□□□ 1.33
LAMP3-204ENST00000476015 COL5A2P05997 1499 aaPredicted RBP23.35■■□□□ 1.33
LAMP3-204ENST00000476015 FANCIQ9NVI1 1328 aa23.34■■□□□ 1.33
LAMP3-204ENST00000476015 LARP1Q6PKG0 1096 aaKnown RBP23.34■■□□□ 1.33
LAMP3-204ENST00000476015 TSR2Q969E8 191 aaKnown RBP23.34■■□□□ 1.33
LAMP3-204ENST00000476015 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
LAMP3-204ENST00000476015 CHL1O00533 1208 aa23.32■■□□□ 1.32
LAMP3-204ENST00000476015 EXOSC9Q06265 439 aaKnown RBP23.32■■□□□ 1.32
LAMP3-204ENST00000476015 FKBP8Q14318 412 aa23.32■■□□□ 1.32
LAMP3-204ENST00000476015 IL17REQ8NFR9 667 aa23.32■■□□□ 1.32
LAMP3-204ENST00000476015 NGLY1Q96IV0 654 aa23.31■■□□□ 1.32
LAMP3-204ENST00000476015 BABAM1Q9NWV8 329 aa23.31■■□□□ 1.32
LAMP3-204ENST00000476015 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
LAMP3-204ENST00000476015 MBIPQ9NS73 344 aa23.3■■□□□ 1.32
LAMP3-204ENST00000476015 EP400Q96L91 3159 aa23.3■■□□□ 1.32
LAMP3-204ENST00000476015 TAF7Q15545 349 aaPredicted RBP23.29■■□□□ 1.32
LAMP3-204ENST00000476015 CRB1P82279 1406 aa23.28■■□□□ 1.32
LAMP3-204ENST00000476015 IL2RBP14784 551 aa23.28■■□□□ 1.32
LAMP3-204ENST00000476015 RRP1P56182 461 aaKnown RBP23.28■■□□□ 1.32
LAMP3-204ENST00000476015 ERICH6BQ5W0A0 696 aa23.28■■□□□ 1.32
LAMP3-204ENST00000476015 IFNL2Q8IZJ0 200 aa23.28■■□□□ 1.32
LAMP3-204ENST00000476015 ZCRB1Q8TBF4 217 aaKnown RBP23.27■■□□□ 1.32
LAMP3-204ENST00000476015 ZNF428Q96B54 188 aa23.27■■□□□ 1.32
LAMP3-204ENST00000476015 RNMTO43148 476 aaKnown RBP23.26■■□□□ 1.31
LAMP3-204ENST00000476015 LGR6Q9HBX8 967 aa23.26■■□□□ 1.31
LAMP3-204ENST00000476015 HSP90AB1P08238 724 aaKnown RBP23.25■■□□□ 1.31
LAMP3-204ENST00000476015 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
LAMP3-204ENST00000476015 MPRIPQ6WCQ1 1025 aa23.24■■□□□ 1.31
LAMP3-204ENST00000476015 TSPYL4Q9UJ04 414 aa23.24■■□□□ 1.31
LAMP3-204ENST00000476015 PHKG2P15735 406 aa23.23■■□□□ 1.31
LAMP3-204ENST00000476015 TEFQ10587 303 aa23.23■■□□□ 1.31
LAMP3-204ENST00000476015 USP21Q9UK80 565 aa23.23■■□□□ 1.31
LAMP3-204ENST00000476015 CEMIPQ8WUJ3 1361 aa23.23■■□□□ 1.31
LAMP3-204ENST00000476015 USP35Q9P2H5 1018 aa23.22■■□□□ 1.31
LAMP3-204ENST00000476015 MEGF6O75095 1541 aa23.22■■□□□ 1.31
LAMP3-204ENST00000476015 VAMP4O75379 141 aa23.21■■□□□ 1.31
LAMP3-204ENST00000476015 BCAR3O75815 825 aa23.21■■□□□ 1.31
LAMP3-204ENST00000476015 TRPC5Q9UL62 973 aaPredicted RBP23.21■■□□□ 1.31
LAMP3-204ENST00000476015 THRAP3Q9Y2W1 955 aaKnown RBP23.21■■□□□ 1.31
LAMP3-204ENST00000476015 OVOS2A0A0G2JMS6 1433 aa23.21■■□□□ 1.31
LAMP3-204ENST00000476015 IRX6P78412 446 aaPredicted RBP23.2■■□□□ 1.3
LAMP3-204ENST00000476015 DCAF5Q96JK2 942 aa23.2■■□□□ 1.3
LAMP3-204ENST00000476015 CDCA7Q9BWT1 371 aaPredicted RBP23.2■■□□□ 1.3
LAMP3-204ENST00000476015 MIS18AQ9NYP9 233 aa23.2■■□□□ 1.3
LAMP3-204ENST00000476015 TWISTNBQ3B726 338 aaPredicted RBP23.19■■□□□ 1.3
LAMP3-204ENST00000476015 ALDH1L2Q3SY69 923 aa23.19■■□□□ 1.3
LAMP3-204ENST00000476015 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
LAMP3-204ENST00000476015 PCDH11XQ9BZA7 1347 aa23.18■■□□□ 1.3
LAMP3-204ENST00000476015 PCDH11YQ9BZA8 1340 aa23.18■■□□□ 1.3
LAMP3-204ENST00000476015 CYP27B1O15528 508 aa23.18■■□□□ 1.3
LAMP3-204ENST00000476015 UNC5CLQ8IV45 518 aa23.18■■□□□ 1.3
LAMP3-204ENST00000476015 FNBP4Q8N3X1 1017 aaPredicted RBP23.18■■□□□ 1.3
LAMP3-204ENST00000476015 PLIN1O60240 522 aa23.17■■□□□ 1.3
LAMP3-204ENST00000476015 SPATA31A1Q5TZJ5 1347 aa23.16■■□□□ 1.3
LAMP3-204ENST00000476015 BTBD11A6QL63 1104 aa23.16■■□□□ 1.3
LAMP3-204ENST00000476015 ELL2O00472 640 aaPredicted RBP23.16■■□□□ 1.3
LAMP3-204ENST00000476015 CCDC125Q86Z20 511 aa23.16■■□□□ 1.3
LAMP3-204ENST00000476015 TSPYL6Q8N831 410 aa23.16■■□□□ 1.3
LAMP3-204ENST00000476015 SLIT2O94813 1529 aa23.16■■□□□ 1.3
LAMP3-204ENST00000476015 ATRNO75882 1429 aa23.16■■□□□ 1.3
LAMP3-204ENST00000476015 SOS1Q07889 1333 aaPredicted RBP23.15■■□□□ 1.3
LAMP3-204ENST00000476015 EXOC5O00471 708 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms