RNA–Protein interactions for RNA: ENST00000475683.1

TUBA4A-209, Transcript of tubulin alpha 4a, humanhuman

TSL 2

Gene TUBA4A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-209ENST00000475683 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
TUBA4A-209ENST00000475683 DDX54Q8TDD1 881 aaKnown RBP18.58■□□□□ 0.56
TUBA4A-209ENST00000475683 AKT1S1Q96B36 256 aa18.58■□□□□ 0.56
TUBA4A-209ENST00000475683 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
TUBA4A-209ENST00000475683 WASHC2AQ641Q2 1341 aa18.57■□□□□ 0.56
TUBA4A-209ENST00000475683 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
TUBA4A-209ENST00000475683 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
TUBA4A-209ENST00000475683 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
TUBA4A-209ENST00000475683 IP6K1Q92551 441 aa18.56■□□□□ 0.56
TUBA4A-209ENST00000475683 NSD2O96028 1365 aa18.55■□□□□ 0.56
TUBA4A-209ENST00000475683 MEGF6O75095 1541 aa18.55■□□□□ 0.56
TUBA4A-209ENST00000475683 SLC24A1O60721 1099 aa18.55■□□□□ 0.56
TUBA4A-209ENST00000475683 MAP3K19Q56UN5 1328 aa18.53■□□□□ 0.56
TUBA4A-209ENST00000475683 KLHL34Q8N239 644 aa18.53■□□□□ 0.56
TUBA4A-209ENST00000475683 TERF2IPQ9NYB0 399 aa18.53■□□□□ 0.56
TUBA4A-209ENST00000475683 PRIM1P49642 420 aaKnown RBP18.52■□□□□ 0.56
TUBA4A-209ENST00000475683 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
TUBA4A-209ENST00000475683 TAF1LQ8IZX4 1826 aa18.51■□□□□ 0.55
TUBA4A-209ENST00000475683 HOXC9P31274 260 aa18.51■□□□□ 0.55
TUBA4A-209ENST00000475683 ANKRD36BQ8N2N9 1353 aa18.51■□□□□ 0.55
TUBA4A-209ENST00000475683 SLC27A3Q5K4L6 730 aa18.5■□□□□ 0.55
TUBA4A-209ENST00000475683 NLGN2Q8NFZ4 835 aa18.5■□□□□ 0.55
TUBA4A-209ENST00000475683 PUS7Q96PZ0 661 aaKnown RBP18.5■□□□□ 0.55
TUBA4A-209ENST00000475683 C5P01031 1676 aa18.5■□□□□ 0.55
TUBA4A-209ENST00000475683 GPR162Q16538 588 aa18.49■□□□□ 0.55
TUBA4A-209ENST00000475683 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
TUBA4A-209ENST00000475683 KIF20BQ96Q89 1820 aa18.49■□□□□ 0.55
TUBA4A-209ENST00000475683 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
TUBA4A-209ENST00000475683 TFCP2L1Q9NZI6 479 aa18.48■□□□□ 0.55
TUBA4A-209ENST00000475683 ITGB4P16144 1822 aa18.48■□□□□ 0.55
TUBA4A-209ENST00000475683 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
TUBA4A-209ENST00000475683 AMPHP49418 695 aa18.47■□□□□ 0.55
TUBA4A-209ENST00000475683 DDX10Q13206 875 aaKnown RBP18.47■□□□□ 0.55
TUBA4A-209ENST00000475683 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
TUBA4A-209ENST00000475683 SLC16A10Q8TF71 515 aa18.47■□□□□ 0.55
TUBA4A-209ENST00000475683 COG3Q96JB2 828 aa18.47■□□□□ 0.55
TUBA4A-209ENST00000475683 SENP3-EIF4A1A0A087X0R7 540 aa18.46■□□□□ 0.55
TUBA4A-209ENST00000475683 C1QTNF8P60827 252 aa18.46■□□□□ 0.55
TUBA4A-209ENST00000475683 RRS1Q15050 365 aaKnown RBP18.46■□□□□ 0.55
TUBA4A-209ENST00000475683 ZCRB1Q8TBF4 217 aaKnown RBP18.46■□□□□ 0.55
TUBA4A-209ENST00000475683 POLD1P28340 1107 aa18.45■□□□□ 0.54
TUBA4A-209ENST00000475683 NBPF6Q5VWK0 638 aa18.45■□□□□ 0.54
TUBA4A-209ENST00000475683 NBPF4Q96M43 638 aa18.45■□□□□ 0.54
TUBA4A-209ENST00000475683 CCNL1Q9UK58 526 aaPredicted RBP18.44■□□□□ 0.54
TUBA4A-209ENST00000475683 COL23A1Q86Y22 540 aaPredicted RBP18.43■□□□□ 0.54
TUBA4A-209ENST00000475683 GGNBP2Q9H3C7 697 aa18.43■□□□□ 0.54
TUBA4A-209ENST00000475683 RTL1A6NKG5 1358 aa18.42■□□□□ 0.54
TUBA4A-209ENST00000475683 YBX3P16989 372 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■■■■□ 20
TUBA4A-209ENST00000475683 MSL1Q68DK7 614 aa18.42■□□□□ 0.54
TUBA4A-209ENST00000475683 PANK3Q9H999 370 aa18.42■□□□□ 0.54
TUBA4A-209ENST00000475683 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
TUBA4A-209ENST00000475683 UBR3Q6ZT12 1888 aa18.4■□□□□ 0.54
TUBA4A-209ENST00000475683 FYB1O15117 783 aa18.4■□□□□ 0.54
TUBA4A-209ENST00000475683 MSH5O43196 834 aa18.4■□□□□ 0.54
TUBA4A-209ENST00000475683 C4BP0C0L5 1744 aa18.39■□□□□ 0.53
TUBA4A-209ENST00000475683 CARD14Q9BXL6 1004 aa18.38■□□□□ 0.53
TUBA4A-209ENST00000475683 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
TUBA4A-209ENST00000475683 HSP90AB2PQ58FF8 381 aa18.37■□□□□ 0.53
TUBA4A-209ENST00000475683 SMIM5Q71RC9 77 aa18.37■□□□□ 0.53
TUBA4A-209ENST00000475683 PER1O15534 1290 aaPredicted RBP18.36■□□□□ 0.53
TUBA4A-209ENST00000475683 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
TUBA4A-209ENST00000475683 AMIGO3Q86WK7 504 aa18.36■□□□□ 0.53
TUBA4A-209ENST00000475683 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
TUBA4A-209ENST00000475683 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
TUBA4A-209ENST00000475683 PALLDQ8WX93 1383 aa18.35■□□□□ 0.53
TUBA4A-209ENST00000475683 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
TUBA4A-209ENST00000475683 RAPGEF4Q8WZA2 1011 aa18.35■□□□□ 0.53
TUBA4A-209ENST00000475683 CEP350Q5VT06 3117 aa18.34■□□□□ 0.53
TUBA4A-209ENST00000475683 INSRP06213 1382 aa18.34■□□□□ 0.53
TUBA4A-209ENST00000475683 CYP27B1O15528 508 aa18.34■□□□□ 0.53
TUBA4A-209ENST00000475683 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.53
TUBA4A-209ENST00000475683 MPRIPQ6WCQ1 1025 aa18.33■□□□□ 0.52
TUBA4A-209ENST00000475683 FLT4P35916 1363 aa18.32■□□□□ 0.52
TUBA4A-209ENST00000475683 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
TUBA4A-209ENST00000475683 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
TUBA4A-209ENST00000475683 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
TUBA4A-209ENST00000475683 ATP10DQ9P241 1426 aa18.31■□□□□ 0.52
TUBA4A-209ENST00000475683 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
TUBA4A-209ENST00000475683 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
TUBA4A-209ENST00000475683 NCAPD2Q15021 1401 aa18.29■□□□□ 0.52
TUBA4A-209ENST00000475683 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
TUBA4A-209ENST00000475683 PHF14O94880 888 aa18.27■□□□□ 0.52
TUBA4A-209ENST00000475683 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
TUBA4A-209ENST00000475683 PIGBQ92521 554 aa18.27■□□□□ 0.52
TUBA4A-209ENST00000475683 KIAA1551Q9HCM1 1747 aa18.26■□□□□ 0.51
TUBA4A-209ENST00000475683 KNSTRNQ9Y448 316 aa18.26■□□□□ 0.51
TUBA4A-209ENST00000475683 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
TUBA4A-209ENST00000475683 ADCY9O60503 1353 aa18.26■□□□□ 0.51
TUBA4A-209ENST00000475683 KIF24Q5T7B8 1368 aa18.26■□□□□ 0.51
TUBA4A-209ENST00000475683 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
TUBA4A-209ENST00000475683 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
TUBA4A-209ENST00000475683 AK7Q96M32 723 aa18.25■□□□□ 0.51
TUBA4A-209ENST00000475683 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
TUBA4A-209ENST00000475683 LINC00116Q8NCU8 138 aa18.24■□□□□ 0.51
TUBA4A-209ENST00000475683 KIF13BQ9NQT8 1826 aa18.23■□□□□ 0.51
TUBA4A-209ENST00000475683 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.23■□□□□ 0.51
TUBA4A-209ENST00000475683 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
TUBA4A-209ENST00000475683 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
TUBA4A-209ENST00000475683 FLAD1Q8NFF5 587 aa18.23■□□□□ 0.51
TUBA4A-209ENST00000475683 ZNF526Q8TF50 670 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms