RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 FOXD4L5Q5VV16 416 aaPredicted RBP9.18□□□□□ -0.94
PDE6C-202ENST00000475427 VSIG8P0DPA2 414 aa9.17□□□□□ -0.94
PDE6C-202ENST00000475427 INSM1Q01101 510 aaPredicted RBP9.17□□□□□ -0.94
PDE6C-202ENST00000475427 WASHC4Q2M389 1173 aa9.17□□□□□ -0.94
PDE6C-202ENST00000475427 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
PDE6C-202ENST00000475427 OSBPL3Q9H4L5 887 aa9.16□□□□□ -0.94
PDE6C-202ENST00000475427 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
PDE6C-202ENST00000475427 COG6Q9Y2V7 657 aa9.16□□□□□ -0.94
PDE6C-202ENST00000475427 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
PDE6C-202ENST00000475427 SLC35F4A4IF30 521 aa9.15□□□□□ -0.94
PDE6C-202ENST00000475427 TRAK2O60296 914 aa9.15□□□□□ -0.94
PDE6C-202ENST00000475427 RNF144AP50876 292 aaPredicted RBP9.15□□□□□ -0.94
PDE6C-202ENST00000475427 CYP2U1Q7Z449 544 aa9.15□□□□□ -0.94
PDE6C-202ENST00000475427 PHTF2Q8N3S3 785 aa9.15□□□□□ -0.94
PDE6C-202ENST00000475427 CCDC155Q8N6L0 562 aa9.15□□□□□ -0.94
PDE6C-202ENST00000475427 CDCA7Q9BWT1 371 aaPredicted RBP9.15□□□□□ -0.94
PDE6C-202ENST00000475427 MEN1O00255 615 aa9.14□□□□□ -0.95
PDE6C-202ENST00000475427 TMEM132AQ24JP5 1023 aa9.14□□□□□ -0.95
PDE6C-202ENST00000475427 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
PDE6C-202ENST00000475427 SLFNL1Q499Z3 407 aa9.14□□□□□ -0.95
PDE6C-202ENST00000475427 LYSMD3Q7Z3D4 306 aa9.14□□□□□ -0.95
PDE6C-202ENST00000475427 MYCP01106 439 aaPredicted RBP9.12□□□□□ -0.95
PDE6C-202ENST00000475427 GPC1P35052 558 aa9.12□□□□□ -0.95
PDE6C-202ENST00000475427 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
PDE6C-202ENST00000475427 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
PDE6C-202ENST00000475427 SENP3-EIF4A1A0A087X0R7 540 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 FLIIQ13045 1269 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 SEMA3FQ13275 785 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 CLN3Q13286 438 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 POM121Q96HA1 1249 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 NLRP3Q96P20 1036 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 CHIC2Q9UKJ5 165 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 DOLKQ9UPQ8 538 aa9.11□□□□□ -0.95
PDE6C-202ENST00000475427 GNRH1P01148 92 aa9.1□□□□□ -0.95
PDE6C-202ENST00000475427 SOX11P35716 441 aa9.1□□□□□ -0.95
PDE6C-202ENST00000475427 NANOS1Q8WY41 292 aaKnown RBP9.1□□□□□ -0.95
PDE6C-202ENST00000475427 ARHGEF10LQ9HCE6 1279 aa9.1□□□□□ -0.95
PDE6C-202ENST00000475427 RAD21O60216 631 aa9.09□□□□□ -0.95
PDE6C-202ENST00000475427 ITGA6P23229 1130 aa9.09□□□□□ -0.95
PDE6C-202ENST00000475427 USP4Q13107 963 aa9.09□□□□□ -0.95
PDE6C-202ENST00000475427 GPR161Q8N6U8 529 aaKnown RBP9.09□□□□□ -0.95
PDE6C-202ENST00000475427 RHOQP17081 205 aa9.08□□□□□ -0.96
PDE6C-202ENST00000475427 SLC27A3Q5K4L6 730 aa9.08□□□□□ -0.96
PDE6C-202ENST00000475427 GRIP2Q9C0E4 1043 aa9.08□□□□□ -0.96
PDE6C-202ENST00000475427 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
PDE6C-202ENST00000475427 UBTFP17480 764 aaKnown RBP9.07□□□□□ -0.96
PDE6C-202ENST00000475427 LORP23490 312 aaPredicted RBP9.07□□□□□ -0.96
PDE6C-202ENST00000475427 WWC1Q8IX03 1113 aa9.07□□□□□ -0.96
PDE6C-202ENST00000475427 VWA5B2Q8N398 1253 aa9.07□□□□□ -0.96
PDE6C-202ENST00000475427 ESYT1Q9BSJ8 1104 aa9.07□□□□□ -0.96
PDE6C-202ENST00000475427 IL2RAP01589 272 aa9.06□□□□□ -0.96
PDE6C-202ENST00000475427 POU4F2Q12837 409 aa9.06□□□□□ -0.96
PDE6C-202ENST00000475427 OXLD1Q5BKU9 147 aa9.06□□□□□ -0.96
PDE6C-202ENST00000475427 ZSCAN1Q8NBB4 408 aa9.06□□□□□ -0.96
PDE6C-202ENST00000475427 CNKSR1Q969H4 720 aa9.06□□□□□ -0.96
PDE6C-202ENST00000475427 SIRT1Q96EB6 747 aa9.06□□□□□ -0.96
PDE6C-202ENST00000475427 CDC14CA4D256 554 aa9.05□□□□□ -0.96
PDE6C-202ENST00000475427 MAP7D1Q3KQU3 841 aa9.05□□□□□ -0.96
PDE6C-202ENST00000475427 SV2AQ7L0J3 742 aa9.05□□□□□ -0.96
PDE6C-202ENST00000475427 PLPP7Q8NBV4 271 aa9.05□□□□□ -0.96
PDE6C-202ENST00000475427 XAGE2Q96GT9 111 aa9.05□□□□□ -0.96
PDE6C-202ENST00000475427 ALG2Q9H553 416 aa9.05□□□□□ -0.96
PDE6C-202ENST00000475427 CENPCQ03188 943 aa9.04□□□□□ -0.96
PDE6C-202ENST00000475427 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
PDE6C-202ENST00000475427 ESCO1Q5FWF5 840 aa9.03□□□□□ -0.96
PDE6C-202ENST00000475427 NBPF10Q6P3W6 841 aaKnown RBP9.03□□□□□ -0.96
PDE6C-202ENST00000475427 NBPF15Q8N660 670 aa9.03□□□□□ -0.96
PDE6C-202ENST00000475427 COL25A1Q9BXS0 654 aaPredicted RBP9.03□□□□□ -0.96
PDE6C-202ENST00000475427 CUEDC1Q9NWM3 386 aaPredicted RBP9.03□□□□□ -0.96
PDE6C-202ENST00000475427 HRH3Q9Y5N1 445 aa9.03□□□□□ -0.96
PDE6C-202ENST00000475427 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
PDE6C-202ENST00000475427 KRT76Q01546 638 aa9.02□□□□□ -0.97
PDE6C-202ENST00000475427 CNTNAP3BQ96NU0 1288 aa9.02□□□□□ -0.97
PDE6C-202ENST00000475427 CNTNAP3Q9BZ76 1288 aa9.02□□□□□ -0.97
PDE6C-202ENST00000475427 DYRK1BQ9Y463 629 aa9.02□□□□□ -0.97
PDE6C-202ENST00000475427 STAU1O95793 577 aaKnown RBP9.01□□□□□ -0.97
PDE6C-202ENST00000475427 WDR44Q5JSH3 913 aa9.01□□□□□ -0.97
PDE6C-202ENST00000475427 TAS1R3Q7RTX0 852 aa9.01□□□□□ -0.97
PDE6C-202ENST00000475427 ZSCAN10Q96SZ4 725 aaPredicted RBP9.01□□□□□ -0.97
PDE6C-202ENST00000475427 ETNK1Q9HBU6 452 aa9.01□□□□□ -0.97
PDE6C-202ENST00000475427 FAM181BA6NEQ2 426 aa9□□□□□ -0.97
PDE6C-202ENST00000475427 POM121CA8CG34 1229 aa9□□□□□ -0.97
PDE6C-202ENST00000475427 WASLO00401 505 aaPredicted RBP9□□□□□ -0.97
PDE6C-202ENST00000475427 FHDC1Q9C0D6 1143 aaPredicted RBP9□□□□□ -0.97
PDE6C-202ENST00000475427 SKIP12755 728 aa8.99□□□□□ -0.97
PDE6C-202ENST00000475427 RNFT1Q5M7Z0 435 aa8.99□□□□□ -0.97
PDE6C-202ENST00000475427 RIPOR1Q6ZS17 1223 aa8.99□□□□□ -0.97
PDE6C-202ENST00000475427 GAS2L1Q99501 681 aaPredicted RBP8.99□□□□□ -0.97
PDE6C-202ENST00000475427 TIMMDC1Q9NPL8 285 aa8.99□□□□□ -0.97
PDE6C-202ENST00000475427 DBN1Q16643 649 aa8.98□□□□□ -0.97
PDE6C-202ENST00000475427 TRIM22Q8IYM9 498 aa8.98□□□□□ -0.97
PDE6C-202ENST00000475427 GMCL1Q96IK5 515 aa8.98□□□□□ -0.97
PDE6C-202ENST00000475427 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
PDE6C-202ENST00000475427 SCNN1DP51172 638 aa8.97□□□□□ -0.97
PDE6C-202ENST00000475427 GDF10P55107 478 aa8.97□□□□□ -0.97
PDE6C-202ENST00000475427 SUZ12Q15022 739 aaKnown RBP8.97□□□□□ -0.97
PDE6C-202ENST00000475427 TMEM214Q6NUQ4 689 aaKnown RBP8.97□□□□□ -0.97
PDE6C-202ENST00000475427 NFATC2IPQ8NCF5 419 aa8.97□□□□□ -0.97
PDE6C-202ENST00000475427 ADAMTS19Q8TE59 1207 aa8.97□□□□□ -0.97
PDE6C-202ENST00000475427 CLUAP1Q96AJ1 413 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms