RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 ANKRD44Q8N8A2 993 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 TMEM131LA2VDJ0 1609 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 ZNF445P59923 1031 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 CEP85Q6P2H3 762 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 MEIS3Q99687 375 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 STAG3Q9UJ98 1225 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 ATP10DQ9P241 1426 aa16.65■□□□□ 0.26
ARHGEF39-203ENST00000475323 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
ARHGEF39-203ENST00000475323 IBTKQ9P2D0 1353 aaPredicted RBP16.64■□□□□ 0.25
ARHGEF39-203ENST00000475323 YEATS2Q9ULM3 1422 aa16.63■□□□□ 0.25
ARHGEF39-203ENST00000475323 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
ARHGEF39-203ENST00000475323 TSHZ3Q63HK5 1081 aa16.63■□□□□ 0.25
ARHGEF39-203ENST00000475323 ARHGAP31Q2M1Z3 1444 aa16.63■□□□□ 0.25
ARHGEF39-203ENST00000475323 MCM10Q7L590 875 aa16.63■□□□□ 0.25
ARHGEF39-203ENST00000475323 NEO1Q92859 1461 aa16.63■□□□□ 0.25
ARHGEF39-203ENST00000475323 DIP2CQ9Y2E4 1556 aa16.63■□□□□ 0.25
ARHGEF39-203ENST00000475323 MSH6P52701 1360 aa16.62■□□□□ 0.25
ARHGEF39-203ENST00000475323 RGS12O14924 1447 aa16.61■□□□□ 0.25
ARHGEF39-203ENST00000475323 OFD1O75665 1012 aa16.61■□□□□ 0.25
ARHGEF39-203ENST00000475323 RBM10P98175 930 aaKnown RBP16.61■□□□□ 0.25
ARHGEF39-203ENST00000475323 MIS18AQ9NYP9 233 aa16.61■□□□□ 0.25
ARHGEF39-203ENST00000475323 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.61■□□□□ 0.25
ARHGEF39-203ENST00000475323 TMEM63CQ9P1W3 806 aa16.61■□□□□ 0.25
ARHGEF39-203ENST00000475323 ST18O60284 1047 aa16.6■□□□□ 0.25
ARHGEF39-203ENST00000475323 TPM2P07951 284 aa16.6■□□□□ 0.25
ARHGEF39-203ENST00000475323 RTL1A6NKG5 1358 aa16.6■□□□□ 0.25
ARHGEF39-203ENST00000475323 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF39-203ENST00000475323 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
ARHGEF39-203ENST00000475323 SYCE3A1L190 88 aa16.6■□□□□ 0.25
ARHGEF39-203ENST00000475323 NOL8Q76FK4 1167 aaKnown RBP16.6■□□□□ 0.25
ARHGEF39-203ENST00000475323 SULT6B1Q6IMI4 303 aa16.59■□□□□ 0.25
ARHGEF39-203ENST00000475323 PREX1Q8TCU6 1659 aa16.59■□□□□ 0.25
ARHGEF39-203ENST00000475323 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
ARHGEF39-203ENST00000475323 COG3Q96JB2 828 aa16.59■□□□□ 0.25
ARHGEF39-203ENST00000475323 REREQ9P2R6 1566 aa16.59■□□□□ 0.25
ARHGEF39-203ENST00000475323 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
ARHGEF39-203ENST00000475323 F6X3S4 739 aa16.58■□□□□ 0.25
ARHGEF39-203ENST00000475323 FOXD4L6Q3SYB3 417 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF39-203ENST00000475323 SLC4A10Q6U841 1118 aa16.58■□□□□ 0.24
ARHGEF39-203ENST00000475323 FOXD4L3Q6VB84 417 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF39-203ENST00000475323 RNF214Q8ND24 703 aa16.58■□□□□ 0.24
ARHGEF39-203ENST00000475323 CWC22Q9HCG8 908 aaKnown RBP16.58■□□□□ 0.24
ARHGEF39-203ENST00000475323 ATP7BP35670 1465 aa16.58■□□□□ 0.24
ARHGEF39-203ENST00000475323 NEK4P51957 841 aa16.57■□□□□ 0.24
ARHGEF39-203ENST00000475323 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
ARHGEF39-203ENST00000475323 CDK12Q9NYV4 1490 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF39-203ENST00000475323 CPS1P31327 1500 aa16.57■□□□□ 0.24
ARHGEF39-203ENST00000475323 PDE4CQ08493 712 aa16.57■□□□□ 0.24
ARHGEF39-203ENST00000475323 FAM69CQ0P6D2 419 aa16.57■□□□□ 0.24
ARHGEF39-203ENST00000475323 TXNDC2Q86VQ3 553 aa16.57■□□□□ 0.24
ARHGEF39-203ENST00000475323 KIF24Q5T7B8 1368 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 ERC2O15083 957 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 G2E3Q7L622 706 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 PDLIM2Q96JY6 352 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 CPSF1Q10570 1443 aaKnown RBP16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 REC8O95072 547 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 TMX3Q96JJ7 454 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 NOL7Q9UMY1 257 aaKnown RBP16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 EXOC6BQ9Y2D4 811 aa16.56■□□□□ 0.24
ARHGEF39-203ENST00000475323 EDC4Q6P2E9 1401 aaKnown RBP16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 CHL1O00533 1208 aa16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 NUDT16Q96DE0 195 aaKnown RBP16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 RICTORQ6R327 1708 aa16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 SOX12O15370 315 aa16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 PDE1AP54750 535 aa16.55■□□□□ 0.24
ARHGEF39-203ENST00000475323 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF39-203ENST00000475323 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
ARHGEF39-203ENST00000475323 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
ARHGEF39-203ENST00000475323 LRSAM1Q6UWE0 723 aa16.53■□□□□ 0.24
ARHGEF39-203ENST00000475323 FOXO3O43524 673 aa16.52■□□□□ 0.24
ARHGEF39-203ENST00000475323 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.24
ARHGEF39-203ENST00000475323 MPNDQ8N594 471 aa16.52■□□□□ 0.24
ARHGEF39-203ENST00000475323 GDPD2Q9HCC8 539 aa16.52■□□□□ 0.24
ARHGEF39-203ENST00000475323 FAM13BQ9NYF5 915 aa16.52■□□□□ 0.24
ARHGEF39-203ENST00000475323 RIMBP3CA6NJZ7 1639 aa16.52■□□□□ 0.23
ARHGEF39-203ENST00000475323 RIMBP3BA6NNM3 1639 aa16.52■□□□□ 0.23
ARHGEF39-203ENST00000475323 RIMBP3Q9UFD9 1639 aa16.52■□□□□ 0.23
ARHGEF39-203ENST00000475323 NUTM2FA1L443 756 aa16.52■□□□□ 0.23
ARHGEF39-203ENST00000475323 PDCL3Q9H2J4 239 aa16.52■□□□□ 0.23
ARHGEF39-203ENST00000475323 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
ARHGEF39-203ENST00000475323 FGD1P98174 961 aa16.51■□□□□ 0.23
ARHGEF39-203ENST00000475323 HSP90AB2PQ58FF8 381 aa16.51■□□□□ 0.23
ARHGEF39-203ENST00000475323 TSPOAP1O95153 1857 aa16.5■□□□□ 0.23
ARHGEF39-203ENST00000475323 ZNF500O60304 480 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF39-203ENST00000475323 HS1BP3Q53T59 392 aa16.5■□□□□ 0.23
ARHGEF39-203ENST00000475323 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
ARHGEF39-203ENST00000475323 ARID3AQ99856 593 aa16.5■□□□□ 0.23
ARHGEF39-203ENST00000475323 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
ARHGEF39-203ENST00000475323 METP08581 1390 aa16.49■□□□□ 0.23
ARHGEF39-203ENST00000475323 PTPRCP08575 1304 aa16.49■□□□□ 0.23
ARHGEF39-203ENST00000475323 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
ARHGEF39-203ENST00000475323 CCDC61Q9Y6R9 512 aa16.49■□□□□ 0.23
ARHGEF39-203ENST00000475323 NECTIN2Q92692 538 aa16.49■□□□□ 0.23
ARHGEF39-203ENST00000475323 ESYT1Q9BSJ8 1104 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms