RNA–Protein interactions for RNA: ENST00000475126.5

CSTF2-204, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 1,693 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-204ENST00000475126 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
CSTF2-204ENST00000475126 C8orf37Q96NL8 207 aa15.63■□□□□ 0.09
CSTF2-204ENST00000475126 CARD10Q9BWT7 1032 aa15.63■□□□□ 0.09
CSTF2-204ENST00000475126 USP35Q9P2H5 1018 aa15.63■□□□□ 0.09
CSTF2-204ENST00000475126 MAP3K5Q99683 1374 aa15.62■□□□□ 0.09
CSTF2-204ENST00000475126 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
CSTF2-204ENST00000475126 SLIT2O94813 1529 aa15.62■□□□□ 0.09
CSTF2-204ENST00000475126 TATP17735 454 aaPredicted RBP15.61■□□□□ 0.09
CSTF2-204ENST00000475126 PLEKHO1Q53GL0 409 aaPredicted RBP15.61■□□□□ 0.09
CSTF2-204ENST00000475126 ZNF530Q6P9A1 599 aaPredicted RBP15.61■□□□□ 0.09
CSTF2-204ENST00000475126 AMOTQ4VCS5 1084 aa15.6■□□□□ 0.09
CSTF2-204ENST00000475126 PIAS4Q8N2W9 510 aaPredicted RBP15.6■□□□□ 0.09
CSTF2-204ENST00000475126 TSR2Q969E8 191 aaKnown RBP15.6■□□□□ 0.09
CSTF2-204ENST00000475126 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
CSTF2-204ENST00000475126 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
CSTF2-204ENST00000475126 NRAPQ86VF7 1730 aa15.6■□□□□ 0.09
CSTF2-204ENST00000475126 IL16Q14005 1332 aa15.59■□□□□ 0.09
CSTF2-204ENST00000475126 FANCIQ9NVI1 1328 aa15.59■□□□□ 0.09
CSTF2-204ENST00000475126 RTF1Q92541 710 aaKnown RBP15.59■□□□□ 0.09
CSTF2-204ENST00000475126 NGLY1Q96IV0 654 aa15.58■□□□□ 0.08
CSTF2-204ENST00000475126 MYH16Q9H6N6 1097 aa15.58■□□□□ 0.08
CSTF2-204ENST00000475126 LAS1LQ9Y4W2 734 aaKnown RBP15.58■□□□□ 0.08
CSTF2-204ENST00000475126 IL2RBP14784 551 aa15.57■□□□□ 0.08
CSTF2-204ENST00000475126 IL17REQ8NFR9 667 aa15.57■□□□□ 0.08
CSTF2-204ENST00000475126 DLG5Q8TDM6 1919 aa15.57■□□□□ 0.08
CSTF2-204ENST00000475126 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
CSTF2-204ENST00000475126 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
CSTF2-204ENST00000475126 AKAP4Q5JQC9 854 aa15.57■□□□□ 0.08
CSTF2-204ENST00000475126 C1orf141Q5JVX7 400 aa15.57■□□□□ 0.08
CSTF2-204ENST00000475126 SUPT16HQ9Y5B9 1047 aaKnown RBP15.57■□□□□ 0.08
CSTF2-204ENST00000475126 PLEKHG2Q9H7P9 1386 aa15.56■□□□□ 0.08
CSTF2-204ENST00000475126 HTATSF1O43719 755 aaKnown RBP15.56■□□□□ 0.08
CSTF2-204ENST00000475126 ZNF853P0CG23 659 aa15.56■□□□□ 0.08
CSTF2-204ENST00000475126 MEX3CQ5U5Q3 659 aaKnown RBP15.56■□□□□ 0.08
CSTF2-204ENST00000475126 MPRIPQ6WCQ1 1025 aa15.56■□□□□ 0.08
CSTF2-204ENST00000475126 IFT57Q9NWB7 429 aa15.56■□□□□ 0.08
CSTF2-204ENST00000475126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.56■□□□□ 0.08
CSTF2-204ENST00000475126 SPG7Q9UQ90 795 aa15.56■□□□□ 0.08
CSTF2-204ENST00000475126 LRRC37A3O60309 1634 aa15.56■□□□□ 0.08
CSTF2-204ENST00000475126 DISP2A7MBM2 1401 aa15.56■□□□□ 0.08
CSTF2-204ENST00000475126 CYP27B1O15528 508 aa15.55■□□□□ 0.08
CSTF2-204ENST00000475126 LGR6Q9HBX8 967 aa15.55■□□□□ 0.08
CSTF2-204ENST00000475126 MBIPQ9NS73 344 aa15.55■□□□□ 0.08
CSTF2-204ENST00000475126 SPATA31A1Q5TZJ5 1347 aa15.55■□□□□ 0.08
CSTF2-204ENST00000475126 NWD2Q9ULI1 1742 aa15.55■□□□□ 0.08
CSTF2-204ENST00000475126 PHKG2P15735 406 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 UNC5CLQ8IV45 518 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 FNBP4Q8N3X1 1017 aaPredicted RBP15.54■□□□□ 0.08
CSTF2-204ENST00000475126 CFAP44Q96MT7 982 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 RCAN3Q9UKA8 241 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 CEMIPQ8WUJ3 1361 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
CSTF2-204ENST00000475126 GNAI1P63096 354 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 CCDC9Q9Y3X0 531 aaKnown RBP15.54■□□□□ 0.08
CSTF2-204ENST00000475126 SPATA31A5Q5VU36 1347 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 SPATA31A7Q8IWB4 1347 aa15.54■□□□□ 0.08
CSTF2-204ENST00000475126 KDM6AO15550 1401 aaPredicted RBP15.53■□□□□ 0.08
CSTF2-204ENST00000475126 EXOSC9Q06265 439 aaKnown RBP15.53■□□□□ 0.08
CSTF2-204ENST00000475126 ZCRB1Q8TBF4 217 aaKnown RBP15.53■□□□□ 0.08
CSTF2-204ENST00000475126 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
CSTF2-204ENST00000475126 PCDH11XQ9BZA7 1347 aa15.52■□□□□ 0.08
CSTF2-204ENST00000475126 PCDH11YQ9BZA8 1340 aa15.52■□□□□ 0.08
CSTF2-204ENST00000475126 IFNL2Q8IZJ0 200 aa15.52■□□□□ 0.08
CSTF2-204ENST00000475126 USP21Q9UK80 565 aa15.52■□□□□ 0.08
CSTF2-204ENST00000475126 RNMTO43148 476 aaKnown RBP15.51■□□□□ 0.07
CSTF2-204ENST00000475126 AFF2P51816 1311 aa15.51■□□□□ 0.07
CSTF2-204ENST00000475126 CHL1O00533 1208 aa15.51■□□□□ 0.07
CSTF2-204ENST00000475126 VPS72Q15906 364 aa15.51■□□□□ 0.07
CSTF2-204ENST00000475126 DDX54Q8TDD1 881 aaKnown RBP15.5■□□□□ 0.07
CSTF2-204ENST00000475126 TSPYL4Q9UJ04 414 aa15.5■□□□□ 0.07
CSTF2-204ENST00000475126 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
CSTF2-204ENST00000475126 THRAP3Q9Y2W1 955 aaKnown RBP15.49■□□□□ 0.07
CSTF2-204ENST00000475126 TEFQ10587 303 aa15.48■□□□□ 0.07
CSTF2-204ENST00000475126 TSPYL6Q8N831 410 aa15.48■□□□□ 0.07
CSTF2-204ENST00000475126 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
CSTF2-204ENST00000475126 TNS2Q63HR2 1409 aa15.48■□□□□ 0.07
CSTF2-204ENST00000475126 SHANK3Q9BYB0 1731 aa15.48■□□□□ 0.07
CSTF2-204ENST00000475126 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
CSTF2-204ENST00000475126 FBXO41Q8TF61 875 aa15.48■□□□□ 0.07
CSTF2-204ENST00000475126 DCAF5Q96JK2 942 aa15.48■□□□□ 0.07
CSTF2-204ENST00000475126 ELL2O00472 640 aaPredicted RBP15.47■□□□□ 0.07
CSTF2-204ENST00000475126 IRX6P78412 446 aaPredicted RBP15.47■□□□□ 0.07
CSTF2-204ENST00000475126 FAM98CQ17RN3 349 aaKnown RBP15.47■□□□□ 0.07
CSTF2-204ENST00000475126 BARGINQ6ZT62 677 aa15.47■□□□□ 0.07
CSTF2-204ENST00000475126 C8orf58Q8NAV2 365 aa15.47■□□□□ 0.07
CSTF2-204ENST00000475126 GTF3C3Q9Y5Q9 886 aa15.47■□□□□ 0.07
CSTF2-204ENST00000475126 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
CSTF2-204ENST00000475126 HSP90AB1P08238 724 aaKnown RBP15.46■□□□□ 0.07
CSTF2-204ENST00000475126 BCL2L13Q9BXK5 485 aa15.46■□□□□ 0.07
CSTF2-204ENST00000475126 WNK3Q9BYP7 1800 aa15.46■□□□□ 0.07
CSTF2-204ENST00000475126 MRC1P22897 1456 aa15.46■□□□□ 0.06
CSTF2-204ENST00000475126 BCAR3O75815 825 aa15.45■□□□□ 0.06
CSTF2-204ENST00000475126 RRP1P56182 461 aaKnown RBP15.45■□□□□ 0.06
CSTF2-204ENST00000475126 CDCA7Q9BWT1 371 aaPredicted RBP15.45■□□□□ 0.06
CSTF2-204ENST00000475126 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.45■□□□□ 0.06
CSTF2-204ENST00000475126 RARSP54136 660 aaKnown RBP15.44■□□□□ 0.06
CSTF2-204ENST00000475126 NKX1-1Q15270 411 aaPredicted RBP15.44■□□□□ 0.06
CSTF2-204ENST00000475126 SLC52A2Q9HAB3 445 aa15.44■□□□□ 0.06
CSTF2-204ENST00000475126 ATRNO75882 1429 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms