RNA–Protein interactions for RNA: ENST00000474706.6

PDPK1-210, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-210ENST00000474706 MAP2P11137 1827 aaKnown RBP18.36■□□□□ 0.53
PDPK1-210ENST00000474706 HSP90AB2PQ58FF8 381 aa18.36■□□□□ 0.53
PDPK1-210ENST00000474706 PKD1L3Q7Z443 1732 aa18.36■□□□□ 0.53
PDPK1-210ENST00000474706 ZCRB1Q8TBF4 217 aaKnown RBP18.35■□□□□ 0.53
PDPK1-210ENST00000474706 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
PDPK1-210ENST00000474706 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
PDPK1-210ENST00000474706 LY75O60449 1722 aa18.34■□□□□ 0.53
PDPK1-210ENST00000474706 NSD2O96028 1365 aa18.33■□□□□ 0.53
PDPK1-210ENST00000474706 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.52
PDPK1-210ENST00000474706 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.52
PDPK1-210ENST00000474706 POLR3GLQ9BT43 218 aa18.33■□□□□ 0.52
PDPK1-210ENST00000474706 SPON1Q9HCB6 807 aa18.33■□□□□ 0.52
PDPK1-210ENST00000474706 STK32BQ9NY57 414 aa18.33■□□□□ 0.52
PDPK1-210ENST00000474706 QSER1Q2KHR3 1735 aa18.32■□□□□ 0.52
PDPK1-210ENST00000474706 SLC15A2Q16348 729 aa18.32■□□□□ 0.52
PDPK1-210ENST00000474706 WASHC2AQ641Q2 1341 aa18.31■□□□□ 0.52
PDPK1-210ENST00000474706 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
PDPK1-210ENST00000474706 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
PDPK1-210ENST00000474706 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
PDPK1-210ENST00000474706 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
PDPK1-210ENST00000474706 SLC27A3Q5K4L6 730 aa18.28■□□□□ 0.52
PDPK1-210ENST00000474706 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
PDPK1-210ENST00000474706 PLEKHG2Q9H7P9 1386 aa18.28■□□□□ 0.52
PDPK1-210ENST00000474706 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
PDPK1-210ENST00000474706 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.52
PDPK1-210ENST00000474706 PDGFDQ9GZP0 370 aaPredicted RBP18.27■□□□□ 0.52
PDPK1-210ENST00000474706 PANK3Q9H999 370 aa18.27■□□□□ 0.52
PDPK1-210ENST00000474706 TUBGCP6Q96RT7 1819 aa18.27■□□□□ 0.52
PDPK1-210ENST00000474706 PPM1GO15355 546 aaPredicted RBP18.26■□□□□ 0.51
PDPK1-210ENST00000474706 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
PDPK1-210ENST00000474706 UTRNP46939 3433 aa18.26■□□□□ 0.51
PDPK1-210ENST00000474706 PPP1R1BQ9UD71 204 aaPredicted RBP18.25■□□□□ 0.51
PDPK1-210ENST00000474706 ITGB4P16144 1822 aa18.24■□□□□ 0.51
PDPK1-210ENST00000474706 ZNF827Q17R98 1081 aa18.24■□□□□ 0.51
PDPK1-210ENST00000474706 CYP27B1O15528 508 aa18.23■□□□□ 0.51
PDPK1-210ENST00000474706 ZBTB7AO95365 584 aa18.23■□□□□ 0.51
PDPK1-210ENST00000474706 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
PDPK1-210ENST00000474706 C5P01031 1676 aa18.22■□□□□ 0.51
PDPK1-210ENST00000474706 PTGER2P43116 358 aa18.22■□□□□ 0.51
PDPK1-210ENST00000474706 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
PDPK1-210ENST00000474706 EYA1Q99502 592 aa18.22■□□□□ 0.51
PDPK1-210ENST00000474706 COL24A1Q17RW2 1714 aa18.22■□□□□ 0.51
PDPK1-210ENST00000474706 KIF7Q2M1P5 1343 aa18.22■□□□□ 0.51
PDPK1-210ENST00000474706 TNNT2P45379 298 aaPredicted RBP18.21■□□□□ 0.51
PDPK1-210ENST00000474706 EIF4A2Q14240 407 aaKnown RBP18.21■□□□□ 0.51
PDPK1-210ENST00000474706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.21■□□□□ 0.51
PDPK1-210ENST00000474706 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
PDPK1-210ENST00000474706 SPG7Q9UQ90 795 aa18.2■□□□□ 0.5
PDPK1-210ENST00000474706 TAF1LQ8IZX4 1826 aa18.19■□□□□ 0.5
PDPK1-210ENST00000474706 KNSTRNQ9Y448 316 aa18.19■□□□□ 0.5
PDPK1-210ENST00000474706 NKX1-1Q15270 411 aaPredicted RBP18.18■□□□□ 0.5
PDPK1-210ENST00000474706 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
PDPK1-210ENST00000474706 SGIP1Q9BQI5 828 aa18.18■□□□□ 0.5
PDPK1-210ENST00000474706 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
PDPK1-210ENST00000474706 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
PDPK1-210ENST00000474706 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
PDPK1-210ENST00000474706 PNPLA7Q6ZV29 1317 aa18.17■□□□□ 0.5
PDPK1-210ENST00000474706 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
PDPK1-210ENST00000474706 SLC16A10Q8TF71 515 aa18.16■□□□□ 0.5
PDPK1-210ENST00000474706 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
PDPK1-210ENST00000474706 KCNQ4P56696 695 aa18.15■□□□□ 0.5
PDPK1-210ENST00000474706 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
PDPK1-210ENST00000474706 PHKG2P15735 406 aa18.14■□□□□ 0.49
PDPK1-210ENST00000474706 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
PDPK1-210ENST00000474706 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
PDPK1-210ENST00000474706 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.49
PDPK1-210ENST00000474706 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
PDPK1-210ENST00000474706 IFNL2Q8IZJ0 200 aa18.13■□□□□ 0.49
PDPK1-210ENST00000474706 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
PDPK1-210ENST00000474706 KDRP35968 1356 aa18.12■□□□□ 0.49
PDPK1-210ENST00000474706 PIGBQ92521 554 aa18.11■□□□□ 0.49
PDPK1-210ENST00000474706 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
PDPK1-210ENST00000474706 ARXQ96QS3 562 aa18.1■□□□□ 0.49
PDPK1-210ENST00000474706 FHDC1Q9C0D6 1143 aaPredicted RBP18.1■□□□□ 0.49
PDPK1-210ENST00000474706 UBR3Q6ZT12 1888 aa18.09■□□□□ 0.49
PDPK1-210ENST00000474706 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
PDPK1-210ENST00000474706 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
PDPK1-210ENST00000474706 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
PDPK1-210ENST00000474706 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
PDPK1-210ENST00000474706 SYT17Q9BSW7 474 aa18.08■□□□□ 0.48
PDPK1-210ENST00000474706 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
PDPK1-210ENST00000474706 HSP90AB1P08238 724 aaKnown RBP18.07■□□□□ 0.48
PDPK1-210ENST00000474706 POLD1P28340 1107 aa18.07■□□□□ 0.48
PDPK1-210ENST00000474706 IL13P35225 146 aa18.07■□□□□ 0.48
PDPK1-210ENST00000474706 AMOTQ4VCS5 1084 aa18.07■□□□□ 0.48
PDPK1-210ENST00000474706 PLEKHO1Q53GL0 409 aaPredicted RBP18.07■□□□□ 0.48
PDPK1-210ENST00000474706 AEBP1Q8IUX7 1158 aa18.07■□□□□ 0.48
PDPK1-210ENST00000474706 ERVV-2B6SEH9 535 aa18.05■□□□□ 0.48
PDPK1-210ENST00000474706 ZNF530Q6P9A1 599 aaPredicted RBP18.05■□□□□ 0.48
PDPK1-210ENST00000474706 COL23A1Q86Y22 540 aaPredicted RBP18.05■□□□□ 0.48
PDPK1-210ENST00000474706 FLAD1Q8NFF5 587 aa18.05■□□□□ 0.48
PDPK1-210ENST00000474706 DCAF5Q96JK2 942 aa18.05■□□□□ 0.48
PDPK1-210ENST00000474706 LOC102724428A0A0B4J2F2 783 aa18.04■□□□□ 0.48
PDPK1-210ENST00000474706 SIK1P57059 783 aa18.04■□□□□ 0.48
PDPK1-210ENST00000474706 SULT6B1Q6IMI4 303 aa18.04■□□□□ 0.48
PDPK1-210ENST00000474706 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
PDPK1-210ENST00000474706 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
PDPK1-210ENST00000474706 COL3A1P02461 1466 aaPredicted RBP18.03■□□□□ 0.48
PDPK1-210ENST00000474706 CICQ96RK0 1608 aaPredicted RBP18.03■□□□□ 0.48
PDPK1-210ENST00000474706 AK7Q96M32 723 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms