RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 UBAC1Q9BSL1 405 aa21.35■■□□□ 1.01
NOTCH4-204ENST00000474612 HOMER1Q86YM7 354 aa21.35■■□□□ 1.01
NOTCH4-204ENST00000474612 CCDC85AQ96PX6 553 aaPredicted RBP21.35■■□□□ 1.01
NOTCH4-204ENST00000474612 KINO60870 393 aaKnown RBP21.35■■□□□ 1.01
NOTCH4-204ENST00000474612 GSE1Q14687 1217 aa21.35■■□□□ 1.01
NOTCH4-204ENST00000474612 MIS18AQ9NYP9 233 aa21.34■■□□□ 1.01
NOTCH4-204ENST00000474612 STK38Q15208 465 aa21.34■■□□□ 1.01
NOTCH4-204ENST00000474612 ZNF287Q9HBT7 754 aa21.34■■□□□ 1.01
NOTCH4-204ENST00000474612 EMILIN1Q9Y6C2 1016 aa21.34■■□□□ 1.01
NOTCH4-204ENST00000474612 IFNL2Q8IZJ0 200 aa21.33■■□□□ 1.01
NOTCH4-204ENST00000474612 IDH1O75874 414 aaKnown RBP21.33■■□□□ 1.01
NOTCH4-204ENST00000474612 CDKL5O76039 1030 aa21.33■■□□□ 1
NOTCH4-204ENST00000474612 CHD1LQ86WJ1 897 aa21.33■■□□□ 1
NOTCH4-204ENST00000474612 KRT32Q14532 448 aa21.33■■□□□ 1
NOTCH4-204ENST00000474612 NSD2O96028 1365 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 GPS2Q13227 327 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 ASXL2Q76L83 1435 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 NAP1L1P55209 391 aaKnown RBP21.32■■□□□ 1
NOTCH4-204ENST00000474612 NUP133Q8WUM0 1156 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 HYPKQ9NX55 129 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 ABCF2Q9UG63 623 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 PEG3Q9GZU2 1588 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 PIP4K2AP48426 406 aaPredicted RBP21.32■■□□□ 1
NOTCH4-204ENST00000474612 AIDAQ96BJ3 306 aa21.32■■□□□ 1
NOTCH4-204ENST00000474612 STK11IPQ8N1F8 1099 aa21.31■■□□□ 1
NOTCH4-204ENST00000474612 MYD88Q99836 296 aa21.31■■□□□ 1
NOTCH4-204ENST00000474612 KIF1BPQ96EK5 621 aa21.31■■□□□ 1
NOTCH4-204ENST00000474612 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
NOTCH4-204ENST00000474612 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
NOTCH4-204ENST00000474612 LETM1O95202 739 aaPredicted RBP21.31■■□□□ 1
NOTCH4-204ENST00000474612 SLFN5Q08AF3 891 aa21.31■■□□□ 1
NOTCH4-204ENST00000474612 BLOC1S2Q6QNY1 142 aa21.31■■□□□ 1
NOTCH4-204ENST00000474612 RAB11FIP3O75154 756 aa21.3■■□□□ 1
NOTCH4-204ENST00000474612 IL1RAPL2Q9NP60 686 aa21.3■■□□□ 1
NOTCH4-204ENST00000474612 DBF4Q9UBU7 674 aaPredicted RBP21.3■■□□□ 1
NOTCH4-204ENST00000474612 TRMT112Q9UI30 125 aaKnown RBP21.3■■□□□ 1
NOTCH4-204ENST00000474612 ALDH1L2Q3SY69 923 aa21.3■■□□□ 1
NOTCH4-204ENST00000474612 THUMPD2Q9BTF0 503 aaKnown RBP21.3■■□□□ 1
NOTCH4-204ENST00000474612 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
NOTCH4-204ENST00000474612 IFIT5Q13325 482 aaKnown RBP21.3■■□□□ 1
NOTCH4-204ENST00000474612 MBD3O95983 291 aa21.3■■□□□ 1
NOTCH4-204ENST00000474612 ZNF592Q92610 1267 aa21.3■■□□□ 1
NOTCH4-204ENST00000474612 NOL7Q9UMY1 257 aaKnown RBP21.3■■□□□ 1
NOTCH4-204ENST00000474612 RPGRQ92834 1020 aaKnown RBP21.29■■□□□ 1
NOTCH4-204ENST00000474612 PLCH2O75038 1416 aa21.29■■□□□ 1
NOTCH4-204ENST00000474612 FANCIQ9NVI1 1328 aa21.29■■□□□ 1
NOTCH4-204ENST00000474612 UBAP1LF5GYI3 381 aa21.29■■□□□ 1
NOTCH4-204ENST00000474612 WDHD1O75717 1129 aaPredicted RBP21.29■■□□□ 1
NOTCH4-204ENST00000474612 MAP4K4O95819 1239 aaPredicted RBP21.29■■□□□ 1
NOTCH4-204ENST00000474612 ANKIB1Q9P2G1 1089 aa21.29■■□□□ 1
NOTCH4-204ENST00000474612 UHRF1BP1LA0JNW5 1464 aa21.29■■□□□ 1
NOTCH4-204ENST00000474612 NPHP3Q7Z494 1330 aa21.29■■□□□ 1
NOTCH4-204ENST00000474612 DCTN1Q14203 1278 aa21.28■■□□□ 1
NOTCH4-204ENST00000474612 ACEP12821 1306 aa21.28■■□□□ 1
NOTCH4-204ENST00000474612 AK7Q96M32 723 aa21.28■■□□□ 1
NOTCH4-204ENST00000474612 MAGEC2Q9UBF1 373 aaPredicted RBP21.28■■□□□ 1
NOTCH4-204ENST00000474612 ARID3AQ99856 593 aa21.28■■□□□ 1
NOTCH4-204ENST00000474612 FILIP1LQ4L180 1135 aa21.27■■□□□ 1
NOTCH4-204ENST00000474612 IMMTQ16891 758 aaKnown RBP21.27■□□□□ 0.99
NOTCH4-204ENST00000474612 TMEM57Q8N5G2 664 aa21.26■□□□□ 0.99
NOTCH4-204ENST00000474612 DNAAF4Q8WXU2 420 aa21.26■□□□□ 0.99
NOTCH4-204ENST00000474612 GLRX3O76003 335 aaKnown RBP21.26■□□□□ 0.99
NOTCH4-204ENST00000474612 ANKRD24Q8TF21 1146 aa21.26■□□□□ 0.99
NOTCH4-204ENST00000474612 A0A087WZG4 1122 aa21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 ZSCAN31Q96LW9 406 aaPredicted RBP21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 ANKRD18BA2A2Z9 1011 aa21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 TTC21AQ8NDW8 1320 aa21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 USP5P45974 858 aa21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 STK3Q13188 491 aa21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 ZFYVE27Q5T4F4 411 aa21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 CWC27Q6UX04 472 aaKnown RBP21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 SLF2Q8IX21 1173 aa21.25■□□□□ 0.99
NOTCH4-204ENST00000474612 SLC5A1P13866 664 aa21.24■□□□□ 0.99
NOTCH4-204ENST00000474612 WASF1Q92558 559 aa21.24■□□□□ 0.99
NOTCH4-204ENST00000474612 SPINK5Q9NQ38 1064 aaPredicted RBP21.24■□□□□ 0.99
NOTCH4-204ENST00000474612 CRACR2BQ8N4Y2 399 aaPredicted RBP21.24■□□□□ 0.99
NOTCH4-204ENST00000474612 MPHOSPH10O00566 681 aaKnown RBP21.23■□□□□ 0.99
NOTCH4-204ENST00000474612 GPATCH8Q9UKJ3 1502 aaKnown RBP21.23■□□□□ 0.99
NOTCH4-204ENST00000474612 A2MP01023 1474 aa21.23■□□□□ 0.99
NOTCH4-204ENST00000474612 POLR3DP05423 398 aaPredicted RBP21.23■□□□□ 0.99
NOTCH4-204ENST00000474612 DZIP1Q86YF9 867 aaKnown RBP21.23■□□□□ 0.99
NOTCH4-204ENST00000474612 BCL11BQ9C0K0 894 aaPredicted RBP21.23■□□□□ 0.99
NOTCH4-204ENST00000474612 EXOC6BQ9Y2D4 811 aa21.23■□□□□ 0.99
NOTCH4-204ENST00000474612 CCDC173Q0VFZ6 552 aa21.22■□□□□ 0.99
NOTCH4-204ENST00000474612 MAP3K12Q12852 859 aa21.22■□□□□ 0.99
NOTCH4-204ENST00000474612 PDILTQ8N807 584 aa21.22■□□□□ 0.99
NOTCH4-204ENST00000474612 ZNF518AQ6AHZ1 1483 aa21.22■□□□□ 0.99
NOTCH4-204ENST00000474612 STIM1Q13586 685 aa21.22■□□□□ 0.99
NOTCH4-204ENST00000474612 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
NOTCH4-204ENST00000474612 RDXP35241 583 aaKnown RBP21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 BMP2KQ9NSY1 1161 aaPredicted RBP21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 FAM13BQ9NYF5 915 aa21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 SYCP1Q15431 976 aa21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 WDR33Q9C0J8 1336 aaKnown RBP21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 PDIA4P13667 645 aaKnown RBP21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 U3KPZ7 1027 aaPredicted RBP21.21■□□□□ 0.99
NOTCH4-204ENST00000474612 FIBPO43427 364 aa21.2■□□□□ 0.99
NOTCH4-204ENST00000474612 CHRNA2Q15822 529 aa21.2■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms