RNA–Protein interactions for RNA: ENST00000474466.5

HM13-215, Transcript of histocompatibility minor 13, human

TSL 3

Gene HM13, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-215	ENST00000474466	RAPGEF4	Q8WZA2	1011 aa		13.9	□□□□□ -0.18
HM13-215	ENST00000474466	NHS	Q6T4R5	1651 aa		13.9	□□□□□ -0.18
HM13-215	ENST00000474466	DOT1L	Q8TEK3	1739 aa		13.9	□□□□□ -0.18
HM13-215	ENST00000474466	BCL9	O00512	1426 aa		13.9	□□□□□ -0.19
HM13-215	ENST00000474466	PLEKHG2	Q9H7P9	1386 aa		13.89	□□□□□ -0.19
HM13-215	ENST00000474466	TAT	P17735	454 aa	Predicted RBP	13.89	□□□□□ -0.19
HM13-215	ENST00000474466	IL13	P35225	146 aa		13.89	□□□□□ -0.19
HM13-215	ENST00000474466	CCDC125	Q86Z20	511 aa		13.89	□□□□□ -0.19
HM13-215	ENST00000474466	MARCH10	Q8NA82	808 aa	Predicted RBP	13.89	□□□□□ -0.19
HM13-215	ENST00000474466	ITGB4	P16144	1822 aa		13.88	□□□□□ -0.19
HM13-215	ENST00000474466	DIAPH1	O60610	1272 aa	Known RBP	13.88	□□□□□ -0.19
HM13-215	ENST00000474466	RALBP1	Q15311	655 aa		13.88	□□□□□ -0.19
HM13-215	ENST00000474466	ZCRB1	Q8TBF4	217 aa	Known RBP	13.88	□□□□□ -0.19
HM13-215	ENST00000474466	KDR	P35968	1356 aa		13.87	□□□□□ -0.19
HM13-215	ENST00000474466	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.87	□□□□□ -0.19
HM13-215	ENST00000474466	RGPD4	Q7Z3J3	1758 aa		13.87	□□□□□ -0.19
HM13-215	ENST00000474466	CFAP53	Q96M91	514 aa		13.87	□□□□□ -0.19
HM13-215	ENST00000474466	BTAF1	O14981	1849 aa		13.87	□□□□□ -0.19
HM13-215	ENST00000474466	TOGARAM1	Q9Y4F4	1720 aa		13.85	□□□□□ -0.19
HM13-215	ENST00000474466	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
HM13-215	ENST00000474466	PCDH11X	Q9BZA7	1347 aa		13.85	□□□□□ -0.19
HM13-215	ENST00000474466	PCDH11Y	Q9BZA8	1340 aa		13.85	□□□□□ -0.19
HM13-215	ENST00000474466	SF3B2	Q13435	895 aa	Known RBP	13.84	□□□□□ -0.19
HM13-215	ENST00000474466	SULT6B1	Q6IMI4	303 aa		13.84	□□□□□ -0.19
HM13-215	ENST00000474466	AEBP1	Q8IUX7	1158 aa		13.84	□□□□□ -0.19
HM13-215	ENST00000474466	DDX54	Q8TDD1	881 aa	Known RBP	13.84	□□□□□ -0.19
HM13-215	ENST00000474466	SCN11A	Q9UI33	1791 aa		13.83	□□□□□ -0.19
HM13-215	ENST00000474466	RREB1	Q92766	1687 aa		13.83	□□□□□ -0.2
HM13-215	ENST00000474466	TRIM37	O94972	964 aa		13.83	□□□□□ -0.2
HM13-215	ENST00000474466	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.83	□□□□□ -0.2
HM13-215	ENST00000474466	SPG7	Q9UQ90	795 aa		13.83	□□□□□ -0.2
HM13-215	ENST00000474466	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.83	□□□□□ -0.2
HM13-215	ENST00000474466	PPP4R3CP	Q6ZMV5	832 aa		13.82	□□□□□ -0.2
HM13-215	ENST00000474466	BAG6	P46379	1132 aa		13.81	□□□□□ -0.2
HM13-215	ENST00000474466	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.81	□□□□□ -0.2
HM13-215	ENST00000474466	NUDC	Q9Y266	331 aa		13.81	□□□□□ -0.2
HM13-215	ENST00000474466	DLG5	Q8TDM6	1919 aa		13.8	□□□□□ -0.2
HM13-215	ENST00000474466	U2SURP	O15042	1029 aa	Known RBP	13.8	□□□□□ -0.2
HM13-215	ENST00000474466	CYP27B1	O15528	508 aa		13.8	□□□□□ -0.2
HM13-215	ENST00000474466	HMOX1	P09601	288 aa		13.8	□□□□□ -0.2
HM13-215	ENST00000474466	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.8	□□□□□ -0.2
HM13-215	ENST00000474466	LY75	O60449	1722 aa		13.8	□□□□□ -0.2
HM13-215	ENST00000474466	NUP188	Q5SRE5	1749 aa		13.79	□□□□□ -0.2
HM13-215	ENST00000474466	AMOT	Q4VCS5	1084 aa		13.79	□□□□□ -0.2
HM13-215	ENST00000474466	APBA3	O96018	575 aa		13.78	□□□□□ -0.2
HM13-215	ENST00000474466	NKX1-1	Q15270	411 aa	Predicted RBP	13.78	□□□□□ -0.2
HM13-215	ENST00000474466	DEFB132	Q7Z7B7	95 aa		13.78	□□□□□ -0.2
HM13-215	ENST00000474466	IFNL2	Q8IZJ0	200 aa		13.78	□□□□□ -0.2
HM13-215	ENST00000474466	ACSBG1	Q96GR2	724 aa		13.78	□□□□□ -0.2
HM13-215	ENST00000474466	ADAMTS7	Q9UKP4	1686 aa		13.78	□□□□□ -0.2
HM13-215	ENST00000474466	KCNQ2	O43526	872 aa		13.77	□□□□□ -0.21
HM13-215	ENST00000474466	PHKG2	P15735	406 aa		13.77	□□□□□ -0.21
HM13-215	ENST00000474466	PTF1A	Q7RTS3	328 aa		13.77	□□□□□ -0.21
HM13-215	ENST00000474466	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.76	□□□□□ -0.21
HM13-215	ENST00000474466	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
HM13-215	ENST00000474466	EN1	Q05925	392 aa	Predicted RBP	13.76	□□□□□ -0.21
HM13-215	ENST00000474466	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.76	□□□□□ -0.21
HM13-215	ENST00000474466	PLSCR1	O15162	318 aa		13.75	□□□□□ -0.21
HM13-215	ENST00000474466	HSP90AB1	P08238	724 aa	Known RBP	13.75	□□□□□ -0.21
HM13-215	ENST00000474466	PRIM1	P49642	420 aa	Known RBP	13.75	□□□□□ -0.21
HM13-215	ENST00000474466	RSPH6A	Q9H0K4	717 aa		13.75	□□□□□ -0.21
HM13-215	ENST00000474466	TAF1L	Q8IZX4	1826 aa		13.74	□□□□□ -0.21
HM13-215	ENST00000474466	SIPA1L3	O60292	1781 aa	Predicted RBP	13.74	□□□□□ -0.21
HM13-215	ENST00000474466	FCHSD2	O94868	740 aa		13.74	□□□□□ -0.21
HM13-215	ENST00000474466	C1orf141	Q5JVX7	400 aa		13.74	□□□□□ -0.21
HM13-215	ENST00000474466	CAMKK2	Q96RR4	588 aa		13.74	□□□□□ -0.21
HM13-215	ENST00000474466	KDM6A	O15550	1401 aa	Predicted RBP	13.73	□□□□□ -0.21
HM13-215	ENST00000474466	ANP32C	O43423	234 aa		13.73	□□□□□ -0.21
HM13-215	ENST00000474466	PRKAR2B	P31323	418 aa		13.73	□□□□□ -0.21
HM13-215	ENST00000474466	EZH2	Q15910	746 aa	Known RBP	13.73	□□□□□ -0.21
HM13-215	ENST00000474466	SYTL4	Q96C24	671 aa	Predicted RBP	13.73	□□□□□ -0.21
HM13-215	ENST00000474466	MTHFSD	Q2M296	383 aa	Known RBP	13.72	□□□□□ -0.21
HM13-215	ENST00000474466	AKAP4	Q5JQC9	854 aa		13.72	□□□□□ -0.21
HM13-215	ENST00000474466	DCAF5	Q96JK2	942 aa		13.72	□□□□□ -0.21
HM13-215	ENST00000474466	GAS2L2	Q8NHY3	880 aa		13.71	□□□□□ -0.21
HM13-215	ENST00000474466	C5	P01031	1676 aa		13.7	□□□□□ -0.22
HM13-215	ENST00000474466	MRC1	P22897	1456 aa		13.7	□□□□□ -0.22
HM13-215	ENST00000474466	ERVV-2	B6SEH9	535 aa		13.7	□□□□□ -0.22
HM13-215	ENST00000474466	MPRIP	Q6WCQ1	1025 aa		13.7	□□□□□ -0.22
HM13-215	ENST00000474466	PHACTR3	Q96KR7	559 aa		13.7	□□□□□ -0.22
HM13-215	ENST00000474466	PAPPA	Q13219	1627 aa		13.7	□□□□□ -0.22
HM13-215	ENST00000474466	ZNF831	Q5JPB2	1677 aa		13.69	□□□□□ -0.22
HM13-215	ENST00000474466	PNN	Q9H307	717 aa	Known RBP	13.69	□□□□□ -0.22
HM13-215	ENST00000474466	TMOD3	Q9NYL9	352 aa		13.69	□□□□□ -0.22
HM13-215	ENST00000474466	MAP3K5	Q99683	1374 aa		13.69	□□□□□ -0.22
HM13-215	ENST00000474466	QSER1	Q2KHR3	1735 aa		13.68	□□□□□ -0.22
HM13-215	ENST00000474466	NEFM	P07197	916 aa		13.68	□□□□□ -0.22
HM13-215	ENST00000474466	TXNRD1	Q16881	649 aa		13.68	□□□□□ -0.22
HM13-215	ENST00000474466	PROM2	Q8N271	834 aa		13.68	□□□□□ -0.22
HM13-215	ENST00000474466	PIGB	Q92521	554 aa		13.68	□□□□□ -0.22
HM13-215	ENST00000474466	TUBGCP6	Q96RT7	1819 aa		13.68	□□□□□ -0.22
HM13-215	ENST00000474466	UBR2	Q8IWV8	1755 aa		13.68	□□□□□ -0.22
HM13-215	ENST00000474466	GNAT3	A8MTJ3	354 aa		13.67	□□□□□ -0.22
HM13-215	ENST00000474466	WDR43	Q15061	677 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
HM13-215	ENST00000474466	PLEKHF1	Q96S99	279 aa		13.67	□□□□□ -0.22
HM13-215	ENST00000474466	CIC	Q96RK0	1608 aa	Predicted RBP	13.66	□□□□□ -0.22
HM13-215	ENST00000474466	RNMT	O43148	476 aa	Known RBP	13.66	□□□□□ -0.22
HM13-215	ENST00000474466	CABP4	P57796	275 aa		13.66	□□□□□ -0.22
HM13-215	ENST00000474466	SMARCC1	Q92922	1105 aa	Predicted RBP	13.66	□□□□□ -0.22
HM13-215	ENST00000474466	PALLD	Q8WX93	1383 aa		13.66	□□□□□ -0.22

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