RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 RREB1Q92766 1687 aa25.42■■□□□ 1.66
CCDC171-206ENST00000474193 RGPD2P0DJD1 1756 aa25.41■■□□□ 1.66
CCDC171-206ENST00000474193 SYTL4Q96C24 671 aaPredicted RBP25.41■■□□□ 1.66
CCDC171-206ENST00000474193 RGPD3A6NKT7 1758 aaPredicted RBP25.41■■□□□ 1.66
CCDC171-206ENST00000474193 RGPD4Q7Z3J3 1758 aa25.41■■□□□ 1.66
CCDC171-206ENST00000474193 KIF7Q2M1P5 1343 aa25.39■■□□□ 1.66
CCDC171-206ENST00000474193 NUP188Q5SRE5 1749 aa25.38■■□□□ 1.65
CCDC171-206ENST00000474193 STK32BQ9NY57 414 aa25.38■■□□□ 1.65
CCDC171-206ENST00000474193 NHSQ6T4R5 1651 aa25.37■■□□□ 1.65
CCDC171-206ENST00000474193 PROM2Q8N271 834 aa25.37■■□□□ 1.65
CCDC171-206ENST00000474193 ANKRD26Q9UPS8 1709 aa25.37■■□□□ 1.65
CCDC171-206ENST00000474193 MEGF6O75095 1541 aa25.37■■□□□ 1.65
CCDC171-206ENST00000474193 PCDH11XQ9BZA7 1347 aa25.37■■□□□ 1.65
CCDC171-206ENST00000474193 PCDH11YQ9BZA8 1340 aa25.37■■□□□ 1.65
CCDC171-206ENST00000474193 PRIM1P49642 420 aaKnown RBP25.36■■□□□ 1.65
CCDC171-206ENST00000474193 SPG7Q9UQ90 795 aa25.36■■□□□ 1.65
CCDC171-206ENST00000474193 EYA1Q99502 592 aa25.34■■□□□ 1.65
CCDC171-206ENST00000474193 LRP5O75197 1615 aa25.31■■□□□ 1.64
CCDC171-206ENST00000474193 HMGB2P26583 209 aaKnown RBP25.31■■□□□ 1.64
CCDC171-206ENST00000474193 EIF4A2Q14240 407 aaKnown RBP25.31■■□□□ 1.64
CCDC171-206ENST00000474193 SPON1Q9HCB6 807 aa25.31■■□□□ 1.64
CCDC171-206ENST00000474193 SLC15A2Q16348 729 aa25.3■■□□□ 1.64
CCDC171-206ENST00000474193 SLC27A3Q5K4L6 730 aa25.3■■□□□ 1.64
CCDC171-206ENST00000474193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.3■■□□□ 1.64
CCDC171-206ENST00000474193 BTAF1O14981 1849 aa25.29■■□□□ 1.64
CCDC171-206ENST00000474193 ANO8Q9HCE9 1232 aaPredicted RBP25.28■■□□□ 1.64
CCDC171-206ENST00000474193 PPP1R1BQ9UD71 204 aaPredicted RBP25.28■■□□□ 1.64
CCDC171-206ENST00000474193 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
CCDC171-206ENST00000474193 CYP27B1O15528 508 aa25.24■■□□□ 1.63
CCDC171-206ENST00000474193 IFNL2Q8IZJ0 200 aa25.24■■□□□ 1.63
CCDC171-206ENST00000474193 SRCAPQ6ZRS2 3230 aa25.24■■□□□ 1.63
CCDC171-206ENST00000474193 NCAPD2Q15021 1401 aa25.23■■□□□ 1.63
CCDC171-206ENST00000474193 CC2D1BQ5T0F9 858 aaKnown RBP25.23■■□□□ 1.63
CCDC171-206ENST00000474193 MPRIPQ6WCQ1 1025 aa25.23■■□□□ 1.63
CCDC171-206ENST00000474193 PER1O15534 1290 aaPredicted RBP25.22■■□□□ 1.63
CCDC171-206ENST00000474193 DOT1LQ8TEK3 1739 aa25.22■■□□□ 1.63
CCDC171-206ENST00000474193 SHANK3Q9BYB0 1731 aa25.22■■□□□ 1.63
CCDC171-206ENST00000474193 PLEKHO1Q53GL0 409 aaPredicted RBP25.21■■□□□ 1.63
CCDC171-206ENST00000474193 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
CCDC171-206ENST00000474193 IGSF1Q8N6C5 1336 aa25.2■■□□□ 1.62
CCDC171-206ENST00000474193 NKX1-1Q15270 411 aaPredicted RBP25.2■■□□□ 1.62
CCDC171-206ENST00000474193 SMARCC1Q92922 1105 aaPredicted RBP25.2■■□□□ 1.62
CCDC171-206ENST00000474193 LRRC4BQ9NT99 713 aa25.2■■□□□ 1.62
CCDC171-206ENST00000474193 PLEKHG2Q9H7P9 1386 aa25.19■■□□□ 1.62
CCDC171-206ENST00000474193 AMOTQ4VCS5 1084 aa25.19■■□□□ 1.62
CCDC171-206ENST00000474193 HSP90AB1P08238 724 aaKnown RBP25.18■■□□□ 1.62
CCDC171-206ENST00000474193 MTHFSP49914 203 aa25.18■■□□□ 1.62
CCDC171-206ENST00000474193 ZBTB7AO95365 584 aa25.17■■□□□ 1.62
CCDC171-206ENST00000474193 CNGB1Q14028 1251 aaPredicted RBP25.17■■□□□ 1.62
CCDC171-206ENST00000474193 TFCP2L1Q9NZI6 479 aa25.17■■□□□ 1.62
CCDC171-206ENST00000474193 PHKG2P15735 406 aa25.16■■□□□ 1.62
CCDC171-206ENST00000474193 PKD1L3Q7Z443 1732 aa25.16■■□□□ 1.62
CCDC171-206ENST00000474193 TMOD3Q9NYL9 352 aa25.16■■□□□ 1.62
CCDC171-206ENST00000474193 MTFR1LQ9H019 292 aa25.15■■□□□ 1.62
CCDC171-206ENST00000474193 ATF5Q9Y2D1 282 aaPredicted RBP25.15■■□□□ 1.62
CCDC171-206ENST00000474193 NPC1L1Q9UHC9 1359 aa25.15■■□□□ 1.62
CCDC171-206ENST00000474193 ZNF316A6NFI3 1004 aaPredicted RBP25.14■■□□□ 1.62
CCDC171-206ENST00000474193 DCAF8L1A6NGE4 600 aa25.14■■□□□ 1.62
CCDC171-206ENST00000474193 SULT6B1Q6IMI4 303 aa25.14■■□□□ 1.62
CCDC171-206ENST00000474193 IL13P35225 146 aa25.13■■□□□ 1.61
CCDC171-206ENST00000474193 C1orf141Q5JVX7 400 aa25.13■■□□□ 1.61
CCDC171-206ENST00000474193 PDGFDQ9GZP0 370 aaPredicted RBP25.13■■□□□ 1.61
CCDC171-206ENST00000474193 KCNQ4P56696 695 aa25.12■■□□□ 1.61
CCDC171-206ENST00000474193 ZNF827Q17R98 1081 aa25.12■■□□□ 1.61
CCDC171-206ENST00000474193 SLC16A10Q8TF71 515 aa25.12■■□□□ 1.61
CCDC171-206ENST00000474193 AKT1S1Q96B36 256 aa25.12■■□□□ 1.61
CCDC171-206ENST00000474193 PALLDQ8WX93 1383 aa25.11■■□□□ 1.61
CCDC171-206ENST00000474193 DIAPH1O60610 1272 aaKnown RBP25.11■■□□□ 1.61
CCDC171-206ENST00000474193 ZNF530Q6P9A1 599 aaPredicted RBP25.11■■□□□ 1.61
CCDC171-206ENST00000474193 PIGBQ92521 554 aa25.11■■□□□ 1.61
CCDC171-206ENST00000474193 DCAF5Q96JK2 942 aa25.1■■□□□ 1.61
CCDC171-206ENST00000474193 ERVV-2B6SEH9 535 aa25.09■■□□□ 1.61
CCDC171-206ENST00000474193 LY75O60449 1722 aa25.09■■□□□ 1.61
CCDC171-206ENST00000474193 CASZ1Q86V15 1759 aa25.08■■□□□ 1.61
CCDC171-206ENST00000474193 MSH5O43196 834 aa25.08■■□□□ 1.61
CCDC171-206ENST00000474193 AEBP1Q8IUX7 1158 aa25.08■■□□□ 1.61
CCDC171-206ENST00000474193 PAPPAQ13219 1627 aa25.07■■□□□ 1.6
CCDC171-206ENST00000474193 ITGB4P16144 1822 aa25.07■■□□□ 1.6
CCDC171-206ENST00000474193 FLAD1Q8NFF5 587 aa25.06■■□□□ 1.6
CCDC171-206ENST00000474193 CFAP53Q96M91 514 aa25.06■■□□□ 1.6
CCDC171-206ENST00000474193 POLD1P28340 1107 aa25.05■■□□□ 1.6
CCDC171-206ENST00000474193 CABP4P57796 275 aa25.05■■□□□ 1.6
CCDC171-206ENST00000474193 KDRP35968 1356 aa25.04■■□□□ 1.6
CCDC171-206ENST00000474193 PTGER2P43116 358 aa25.03■■□□□ 1.6
CCDC171-206ENST00000474193 AK7Q96M32 723 aa25.03■■□□□ 1.6
CCDC171-206ENST00000474193 PNPLA7Q6ZV29 1317 aa25.03■■□□□ 1.6
CCDC171-206ENST00000474193 LOC102724428A0A0B4J2F2 783 aa25.02■■□□□ 1.6
CCDC171-206ENST00000474193 HMOX1P09601 288 aa25.02■■□□□ 1.6
CCDC171-206ENST00000474193 SIK1P57059 783 aa25.02■■□□□ 1.6
CCDC171-206ENST00000474193 TOGARAM1Q9Y4F4 1720 aa25.01■■□□□ 1.59
CCDC171-206ENST00000474193 U2SURPO15042 1029 aaKnown RBP25.01■■□□□ 1.59
CCDC171-206ENST00000474193 DDX10Q13206 875 aaKnown RBP25.01■■□□□ 1.59
CCDC171-206ENST00000474193 ARXQ96QS3 562 aa25.01■■□□□ 1.59
CCDC171-206ENST00000474193 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
CCDC171-206ENST00000474193 ATP6V1AP38606 617 aa25■■□□□ 1.59
CCDC171-206ENST00000474193 AKAP4Q5JQC9 854 aa25■■□□□ 1.59
CCDC171-206ENST00000474193 ATG3Q9NT62 314 aa24.99■■□□□ 1.59
CCDC171-206ENST00000474193 NUDCQ9Y266 331 aa24.99■■□□□ 1.59
CCDC171-206ENST00000474193 RBM42Q9BTD8 480 aaKnown RBP24.98■■□□□ 1.59
CCDC171-206ENST00000474193 QSER1Q2KHR3 1735 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms