RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 HAP1P54257 671 aaPredicted RBP6.26□□□□□ -1.41
CCDC39-203ENST00000473854 PTK2Q05397 1052 aa6.26□□□□□ -1.41
CCDC39-203ENST00000473854 QPCTQ16769 361 aa6.26□□□□□ -1.41
CCDC39-203ENST00000473854 PNMA1Q8ND90 353 aa6.26□□□□□ -1.41
CCDC39-203ENST00000473854 PIK3R2O00459 728 aa6.25□□□□□ -1.41
CCDC39-203ENST00000473854 MYSM1Q5VVJ2 828 aa6.25□□□□□ -1.41
CCDC39-203ENST00000473854 CUEDC1Q9NWM3 386 aaPredicted RBP6.25□□□□□ -1.41
CCDC39-203ENST00000473854 LIMD1Q9UGP4 676 aa6.25□□□□□ -1.41
CCDC39-203ENST00000473854 MKL2Q9ULH7 1088 aa6.25□□□□□ -1.41
CCDC39-203ENST00000473854 GPC1P35052 558 aa6.24□□□□□ -1.41
CCDC39-203ENST00000473854 RNF144AP50876 292 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-203ENST00000473854 ZNF784Q8NCA9 323 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-203ENST00000473854 ACDQ96AP0 544 aa6.24□□□□□ -1.41
CCDC39-203ENST00000473854 OIP5O43482 229 aa6.23□□□□□ -1.41
CCDC39-203ENST00000473854 MX2P20592 715 aa6.23□□□□□ -1.41
CCDC39-203ENST00000473854 MAP2K3P46734 347 aa6.23□□□□□ -1.41
CCDC39-203ENST00000473854 RIPOR1Q6ZS17 1223 aa6.23□□□□□ -1.41
CCDC39-203ENST00000473854 DYRK1BQ9Y463 629 aa6.23□□□□□ -1.41
CCDC39-203ENST00000473854 CLK2P49760 499 aaKnown RBP6.22□□□□□ -1.41
CCDC39-203ENST00000473854 GPR25O00155 361 aa6.21□□□□□ -1.42
CCDC39-203ENST00000473854 RTL5Q5HYW3 569 aaPredicted RBP6.21□□□□□ -1.42
CCDC39-203ENST00000473854 PPP2R2DQ66LE6 453 aa6.21□□□□□ -1.42
CCDC39-203ENST00000473854 PRICKLE2Q7Z3G6 844 aa6.21□□□□□ -1.42
CCDC39-203ENST00000473854 CCDC125Q86Z20 511 aa6.21□□□□□ -1.42
CCDC39-203ENST00000473854 SEPT12Q8IYM1 358 aa6.21□□□□□ -1.42
CCDC39-203ENST00000473854 OXCT2Q9BYC2 517 aaPredicted RBP6.21□□□□□ -1.42
CCDC39-203ENST00000473854 RSPH6AQ9H0K4 717 aa6.21□□□□□ -1.42
CCDC39-203ENST00000473854 TRIM66O15016 1216 aa6.2□□□□□ -1.42
CCDC39-203ENST00000473854 LILRA1O75019 489 aa6.2□□□□□ -1.42
CCDC39-203ENST00000473854 ADAM32Q8TC27 787 aa6.2□□□□□ -1.42
CCDC39-203ENST00000473854 GTPBP3Q969Y2 492 aaKnown RBP6.2□□□□□ -1.42
CCDC39-203ENST00000473854 TMPRSS4Q9NRS4 437 aa6.2□□□□□ -1.42
CCDC39-203ENST00000473854 KRBA1A5PL33 1030 aa6.19□□□□□ -1.42
CCDC39-203ENST00000473854 ERVH48-1M5A8F1 160 aa6.19□□□□□ -1.42
CCDC39-203ENST00000473854 RHOQP17081 205 aa6.19□□□□□ -1.42
CCDC39-203ENST00000473854 DBN1Q16643 649 aa6.19□□□□□ -1.42
CCDC39-203ENST00000473854 WDR44Q5JSH3 913 aa6.19□□□□□ -1.42
CCDC39-203ENST00000473854 DZIP3Q86Y13 1208 aaKnown RBP6.19□□□□□ -1.42
CCDC39-203ENST00000473854 AK7Q96M32 723 aa6.19□□□□□ -1.42
CCDC39-203ENST00000473854 GDF2Q9UK05 429 aaPredicted RBP6.19□□□□□ -1.42
CCDC39-203ENST00000473854 PHF24Q9UPV7 400 aa6.19□□□□□ -1.42
CCDC39-203ENST00000473854 FURINP09958 794 aa6.18□□□□□ -1.42
CCDC39-203ENST00000473854 RAB15P59190 212 aa6.18□□□□□ -1.42
CCDC39-203ENST00000473854 VSIG10Q8N0Z9 540 aa6.18□□□□□ -1.42
CCDC39-203ENST00000473854 ZC3H15Q8WU90 426 aaKnown RBP6.18□□□□□ -1.42
CCDC39-203ENST00000473854 ESPNB1AK53 854 aa6.17□□□□□ -1.42
CCDC39-203ENST00000473854 ATP5J2-PTCD1G3V325 749 aa6.17□□□□□ -1.42
CCDC39-203ENST00000473854 ADD1P35611 737 aaKnown RBP6.17□□□□□ -1.42
CCDC39-203ENST00000473854 CTDSPL2Q05D32 466 aa6.17□□□□□ -1.42
CCDC39-203ENST00000473854 KDF1Q8NAX2 398 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-203ENST00000473854 GAS2L1Q99501 681 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-203ENST00000473854 CFHR5Q9BXR6 569 aa6.17□□□□□ -1.42
CCDC39-203ENST00000473854 SLC27A3Q5K4L6 730 aa6.16□□□□□ -1.42
CCDC39-203ENST00000473854 NLRP3Q96P20 1036 aa6.16□□□□□ -1.42
CCDC39-203ENST00000473854 NUCKS1Q9H1E3 243 aaKnown RBP6.16□□□□□ -1.42
CCDC39-203ENST00000473854 RRAGCQ9HB90 399 aa6.16□□□□□ -1.42
CCDC39-203ENST00000473854 MEN1O00255 615 aa6.15□□□□□ -1.42
CCDC39-203ENST00000473854 NR6A1Q15406 480 aa6.15□□□□□ -1.42
CCDC39-203ENST00000473854 GOLGA6L1Q8N7Z2 621 aa6.15□□□□□ -1.42
CCDC39-203ENST00000473854 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.42
CCDC39-203ENST00000473854 NOP53Q9NZM5 478 aaKnown RBP6.15□□□□□ -1.42
CCDC39-203ENST00000473854 F11P03951 625 aa6.14□□□□□ -1.43
CCDC39-203ENST00000473854 SNRPNP63162 240 aaKnown RBP6.14□□□□□ -1.43
CCDC39-203ENST00000473854 LRRN4Q8WUT4 740 aa6.14□□□□□ -1.43
CCDC39-203ENST00000473854 OCSTAMPQ9BR26 566 aa6.14□□□□□ -1.43
CCDC39-203ENST00000473854 CYLDQ9NQC7 956 aa6.14□□□□□ -1.43
CCDC39-203ENST00000473854 SPATA31C2B4DYI2 1134 aa6.13□□□□□ -1.43
CCDC39-203ENST00000473854 GNB5O14775 395 aa6.13□□□□□ -1.43
CCDC39-203ENST00000473854 LBRQ14739 615 aaKnown RBP6.13□□□□□ -1.43
CCDC39-203ENST00000473854 GRIN2CQ14957 1233 aa6.13□□□□□ -1.43
CCDC39-203ENST00000473854 NBPF10Q6P3W6 841 aaKnown RBP6.13□□□□□ -1.43
CCDC39-203ENST00000473854 NBPF15Q8N660 670 aa6.13□□□□□ -1.43
CCDC39-203ENST00000473854 EDARADDQ8WWZ3 215 aa6.13□□□□□ -1.43
CCDC39-203ENST00000473854 TIMMDC1Q9NPL8 285 aa6.13□□□□□ -1.43
CCDC39-203ENST00000473854 AMPD1P23109 780 aa6.12□□□□□ -1.43
CCDC39-203ENST00000473854 COL8A1P27658 744 aa6.12□□□□□ -1.43
CCDC39-203ENST00000473854 POU4F2Q12837 409 aa6.12□□□□□ -1.43
CCDC39-203ENST00000473854 TAS1R3Q7RTX0 852 aa6.12□□□□□ -1.43
CCDC39-203ENST00000473854 CYP2U1Q7Z449 544 aa6.12□□□□□ -1.43
CCDC39-203ENST00000473854 A0A1W2PRU2 124 aa6.11□□□□□ -1.43
CCDC39-203ENST00000473854 SHISA8B8ZZ34 492 aa6.11□□□□□ -1.43
CCDC39-203ENST00000473854 PDE4DQ08499 809 aa6.11□□□□□ -1.43
CCDC39-203ENST00000473854 CLN3Q13286 438 aa6.11□□□□□ -1.43
CCDC39-203ENST00000473854 ZNF592Q92610 1267 aa6.11□□□□□ -1.43
CCDC39-203ENST00000473854 KLRG1Q96E93 195 aa6.11□□□□□ -1.43
CCDC39-203ENST00000473854 WASLO00401 505 aaPredicted RBP6.1□□□□□ -1.43
CCDC39-203ENST00000473854 RNF20Q5VTR2 975 aa6.1□□□□□ -1.43
CCDC39-203ENST00000473854 SLCO4C1Q6ZQN7 724 aa6.1□□□□□ -1.43
CCDC39-203ENST00000473854 GRIP2Q9C0E4 1043 aa6.1□□□□□ -1.43
CCDC39-203ENST00000473854 POLR3EQ9NVU0 708 aa6.1□□□□□ -1.43
CCDC39-203ENST00000473854 C1QTNF9BB2RNN3 333 aa6.09□□□□□ -1.43
CCDC39-203ENST00000473854 ZMYM1Q5SVZ6 1142 aa6.09□□□□□ -1.43
CCDC39-203ENST00000473854 CC2D2BQ6DHV5 1058 aa6.09□□□□□ -1.43
CCDC39-203ENST00000473854 ESF1Q9H501 851 aaKnown RBP6.09□□□□□ -1.43
CCDC39-203ENST00000473854 A0A1B0GTH6 734 aa6.08□□□□□ -1.44
CCDC39-203ENST00000473854 CSB-PGBD3P0DP91 1061 aa6.08□□□□□ -1.44
CCDC39-203ENST00000473854 GTF2E1P29083 439 aaPredicted RBP6.08□□□□□ -1.44
CCDC39-203ENST00000473854 ERVK-9P63128 1117 aa6.08□□□□□ -1.44
CCDC39-203ENST00000473854 PGBD3Q8N328 593 aa6.08□□□□□ -1.44
CCDC39-203ENST00000473854 ATXN7L1Q9ULK2 861 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms