RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 ZNF526Q8TF50 670 aaPredicted RBP23.35■■□□□ 1.33
HPS4-210ENST00000473782 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
HPS4-210ENST00000473782 CD2APQ9Y5K6 639 aa23.35■■□□□ 1.33
HPS4-210ENST00000473782 CCNL1Q9UK58 526 aaPredicted RBP23.34■■□□□ 1.33
HPS4-210ENST00000473782 KIF3CO14782 793 aa23.33■■□□□ 1.33
HPS4-210ENST00000473782 IP6K1Q92551 441 aa23.32■■□□□ 1.32
HPS4-210ENST00000473782 DOT1LQ8TEK3 1739 aa23.32■■□□□ 1.32
HPS4-210ENST00000473782 MSH5O43196 834 aa23.31■■□□□ 1.32
HPS4-210ENST00000473782 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
HPS4-210ENST00000473782 DNAJC5GQ8N7S2 189 aa23.29■■□□□ 1.32
HPS4-210ENST00000473782 FAM208AQ9UK61 1670 aaKnown RBP23.28■■□□□ 1.32
HPS4-210ENST00000473782 AMIGO3Q86WK7 504 aa23.27■■□□□ 1.32
HPS4-210ENST00000473782 LTV1Q96GA3 475 aaPredicted RBP23.27■■□□□ 1.32
HPS4-210ENST00000473782 ZCRB1Q8TBF4 217 aaKnown RBP23.26■■□□□ 1.31
HPS4-210ENST00000473782 MEGF6O75095 1541 aa23.26■■□□□ 1.31
HPS4-210ENST00000473782 SLC12A5Q9H2X9 1139 aa23.25■■□□□ 1.31
HPS4-210ENST00000473782 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
HPS4-210ENST00000473782 USP47Q96K76 1375 aa23.23■■□□□ 1.31
HPS4-210ENST00000473782 EDC4Q6P2E9 1401 aaKnown RBP23.23■■□□□ 1.31
HPS4-210ENST00000473782 FBLN1P23142 703 aa23.22■■□□□ 1.31
HPS4-210ENST00000473782 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
HPS4-210ENST00000473782 ROCK2O75116 1388 aaKnown RBP23.22■■□□□ 1.31
HPS4-210ENST00000473782 SMIM5Q71RC9 77 aa23.21■■□□□ 1.31
HPS4-210ENST00000473782 C5P01031 1676 aa23.2■■□□□ 1.3
HPS4-210ENST00000473782 MAP3K19Q56UN5 1328 aa23.2■■□□□ 1.3
HPS4-210ENST00000473782 HOXC9P31274 260 aa23.2■■□□□ 1.3
HPS4-210ENST00000473782 APLP1P51693 650 aa23.2■■□□□ 1.3
HPS4-210ENST00000473782 RGPD2P0DJD1 1756 aa23.19■■□□□ 1.3
HPS4-210ENST00000473782 A0A1W2PP64 1363 aa23.18■■□□□ 1.3
HPS4-210ENST00000473782 FLAD1Q8NFF5 587 aa23.18■■□□□ 1.3
HPS4-210ENST00000473782 TMC1Q8TDI8 760 aa23.18■■□□□ 1.3
HPS4-210ENST00000473782 TOGARAM1Q9Y4F4 1720 aa23.18■■□□□ 1.3
HPS4-210ENST00000473782 NBPF6Q5VWK0 638 aa23.16■■□□□ 1.3
HPS4-210ENST00000473782 HDGFL2Q7Z4V5 671 aaPredicted RBP23.16■■□□□ 1.3
HPS4-210ENST00000473782 NBPF4Q96M43 638 aa23.16■■□□□ 1.3
HPS4-210ENST00000473782 TAF1LQ8IZX4 1826 aa23.16■■□□□ 1.3
HPS4-210ENST00000473782 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
HPS4-210ENST00000473782 PALLDQ8WX93 1383 aa23.14■■□□□ 1.3
HPS4-210ENST00000473782 SIN3AQ96ST3 1273 aa23.13■■□□□ 1.29
HPS4-210ENST00000473782 TOMM70O94826 608 aa23.12■■□□□ 1.29
HPS4-210ENST00000473782 C4BP0C0L5 1744 aa23.12■■□□□ 1.29
HPS4-210ENST00000473782 COL13A1Q5TAT6 717 aaPredicted RBP23.12■■□□□ 1.29
HPS4-210ENST00000473782 USHBP1Q8N6Y0 703 aa23.12■■□□□ 1.29
HPS4-210ENST00000473782 PCNTO95613 3336 aa23.11■■□□□ 1.29
HPS4-210ENST00000473782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.1■■□□□ 1.29
HPS4-210ENST00000473782 AMPHP49418 695 aa23.09■■□□□ 1.29
HPS4-210ENST00000473782 TERF2IPQ9NYB0 399 aa23.09■■□□□ 1.29
HPS4-210ENST00000473782 UBR3Q6ZT12 1888 aa23.09■■□□□ 1.29
HPS4-210ENST00000473782 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.29
HPS4-210ENST00000473782 PHF14O94880 888 aa23.08■■□□□ 1.29
HPS4-210ENST00000473782 MPRIPQ6WCQ1 1025 aa23.08■■□□□ 1.29
HPS4-210ENST00000473782 CYP27B1O15528 508 aa23.07■■□□□ 1.28
HPS4-210ENST00000473782 HTRA3P83110 453 aa23.07■■□□□ 1.28
HPS4-210ENST00000473782 AK7Q96M32 723 aa23.07■■□□□ 1.28
HPS4-210ENST00000473782 NMRK2Q9NPI5 230 aa23.07■■□□□ 1.28
HPS4-210ENST00000473782 PXDNLA1KZ92 1463 aa23.06■■□□□ 1.28
HPS4-210ENST00000473782 JMYQ8N9B5 988 aa23.06■■□□□ 1.28
HPS4-210ENST00000473782 KIAA1551Q9HCM1 1747 aa23.05■■□□□ 1.28
HPS4-210ENST00000473782 RRS1Q15050 365 aaKnown RBP23.05■■□□□ 1.28
HPS4-210ENST00000473782 LINC00116Q8NCU8 138 aa23.05■■□□□ 1.28
HPS4-210ENST00000473782 COG3Q96JB2 828 aa23.05■■□□□ 1.28
HPS4-210ENST00000473782 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
HPS4-210ENST00000473782 SSFA2P28290 1259 aa23.04■■□□□ 1.28
HPS4-210ENST00000473782 PIGBQ92521 554 aa23.04■■□□□ 1.28
HPS4-210ENST00000473782 RTL1A6NKG5 1358 aa23.03■■□□□ 1.28
HPS4-210ENST00000473782 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
HPS4-210ENST00000473782 RAPGEF4Q8WZA2 1011 aa23.03■■□□□ 1.28
HPS4-210ENST00000473782 KLRG1Q96E93 195 aa23.03■■□□□ 1.28
HPS4-210ENST00000473782 MAP2P11137 1827 aaKnown RBP23.03■■□□□ 1.28
HPS4-210ENST00000473782 PCDH11XQ9BZA7 1347 aa23.02■■□□□ 1.28
HPS4-210ENST00000473782 PCDH11YQ9BZA8 1340 aa23.02■■□□□ 1.28
HPS4-210ENST00000473782 WDR90Q96KV7 1748 aa23.02■■□□□ 1.28
HPS4-210ENST00000473782 TATP17735 454 aaPredicted RBP23.01■■□□□ 1.27
HPS4-210ENST00000473782 SMARCC1Q92922 1105 aaPredicted RBP23.01■■□□□ 1.27
HPS4-210ENST00000473782 RBM46Q8TBY0 533 aaKnown RBP23■■□□□ 1.27
HPS4-210ENST00000473782 ITGB4P16144 1822 aa22.99■■□□□ 1.27
HPS4-210ENST00000473782 KIF13BQ9NQT8 1826 aa22.99■■□□□ 1.27
HPS4-210ENST00000473782 MMP10P09238 476 aa22.99■■□□□ 1.27
HPS4-210ENST00000473782 ITPK1Q13572 414 aa22.99■■□□□ 1.27
HPS4-210ENST00000473782 CARD11Q9BXL7 1154 aa22.99■■□□□ 1.27
HPS4-210ENST00000473782 LOC102724428A0A0B4J2F2 783 aa22.98■■□□□ 1.27
HPS4-210ENST00000473782 A0A0G2JLW4 131 aa22.98■■□□□ 1.27
HPS4-210ENST00000473782 SIK1P57059 783 aa22.98■■□□□ 1.27
HPS4-210ENST00000473782 NEUROD1Q13562 356 aa22.98■■□□□ 1.27
HPS4-210ENST00000473782 HSP90AB2PQ58FF8 381 aa22.98■■□□□ 1.27
HPS4-210ENST00000473782 NSD3Q9BZ95 1437 aa22.98■■□□□ 1.27
HPS4-210ENST00000473782 CAPN15O75808 1086 aa22.97■■□□□ 1.27
HPS4-210ENST00000473782 TGFB2P61812 414 aa22.97■■□□□ 1.27
HPS4-210ENST00000473782 NKX1-1Q15270 411 aaPredicted RBP22.97■■□□□ 1.27
HPS4-210ENST00000473782 BCS1LQ9Y276 419 aa22.97■■□□□ 1.27
HPS4-210ENST00000473782 N4BP2Q86UW6 1770 aaPredicted RBP22.96■■□□□ 1.27
HPS4-210ENST00000473782 FYB1O15117 783 aa22.95■■□□□ 1.26
HPS4-210ENST00000473782 ARHGAP27Q6ZUM4 889 aa22.95■■□□□ 1.26
HPS4-210ENST00000473782 TESK2Q96S53 571 aa22.95■■□□□ 1.26
HPS4-210ENST00000473782 C10orf71Q711Q0 1435 aa22.94■■□□□ 1.26
HPS4-210ENST00000473782 INSRP06213 1382 aa22.94■■□□□ 1.26
HPS4-210ENST00000473782 GNPATO15228 680 aa22.94■■□□□ 1.26
HPS4-210ENST00000473782 KCNA3P22001 575 aa22.94■■□□□ 1.26
HPS4-210ENST00000473782 PRELPP51888 382 aa22.94■■□□□ 1.26
HPS4-210ENST00000473782 DPEP1P16444 411 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms