RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 FLT4P35916 1363 aa12.21□□□□□ -0.45
SMG5-203ENST00000473643 TNS1Q9HBL0 1735 aaKnown RBP12.21□□□□□ -0.45
SMG5-203ENST00000473643 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
SMG5-203ENST00000473643 KCNQ2O43526 872 aa12.21□□□□□ -0.45
SMG5-203ENST00000473643 R3HDM1Q15032 1099 aaKnown RBP12.21□□□□□ -0.45
SMG5-203ENST00000473643 CCDC184Q52MB2 194 aa12.21□□□□□ -0.45
SMG5-203ENST00000473643 PROM2Q8N271 834 aa12.21□□□□□ -0.45
SMG5-203ENST00000473643 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
SMG5-203ENST00000473643 CFAP53Q96M91 514 aa12.2□□□□□ -0.46
SMG5-203ENST00000473643 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
SMG5-203ENST00000473643 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
SMG5-203ENST00000473643 MRS2Q9HD23 443 aa12.19□□□□□ -0.46
SMG5-203ENST00000473643 PPM1GO15355 546 aaPredicted RBP12.18□□□□□ -0.46
SMG5-203ENST00000473643 IL13P35225 146 aa12.18□□□□□ -0.46
SMG5-203ENST00000473643 PNISRQ8TF01 805 aaKnown RBP12.18□□□□□ -0.46
SMG5-203ENST00000473643 COL3A1P02461 1466 aaPredicted RBP12.17□□□□□ -0.46
SMG5-203ENST00000473643 WNK3Q9BYP7 1800 aa12.17□□□□□ -0.46
SMG5-203ENST00000473643 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
SMG5-203ENST00000473643 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
SMG5-203ENST00000473643 RAPGEF4Q8WZA2 1011 aa12.17□□□□□ -0.46
SMG5-203ENST00000473643 ACSBG1Q96GR2 724 aa12.17□□□□□ -0.46
SMG5-203ENST00000473643 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
SMG5-203ENST00000473643 TXNRD1Q16881 649 aa12.16□□□□□ -0.46
SMG5-203ENST00000473643 NUDCQ9Y266 331 aa12.16□□□□□ -0.46
SMG5-203ENST00000473643 MEGF6O75095 1541 aa12.16□□□□□ -0.46
SMG5-203ENST00000473643 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
SMG5-203ENST00000473643 EYA1Q99502 592 aa12.15□□□□□ -0.46
SMG5-203ENST00000473643 MAP2P11137 1827 aaKnown RBP12.15□□□□□ -0.46
SMG5-203ENST00000473643 FAM208AQ9UK61 1670 aaKnown RBP12.15□□□□□ -0.46
SMG5-203ENST00000473643 SBF2Q86WG5 1849 aa12.14□□□□□ -0.47
SMG5-203ENST00000473643 PRIM1P49642 420 aaKnown RBP12.14□□□□□ -0.47
SMG5-203ENST00000473643 NCAPD2Q15021 1401 aa12.13□□□□□ -0.47
SMG5-203ENST00000473643 ANO8Q9HCE9 1232 aaPredicted RBP12.13□□□□□ -0.47
SMG5-203ENST00000473643 CYP27B1O15528 508 aa12.12□□□□□ -0.47
SMG5-203ENST00000473643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.12□□□□□ -0.479e-15■□□□□ 11.3
SMG5-203ENST00000473643 ADAMTS8Q9UP79 889 aa12.12□□□□□ -0.47
SMG5-203ENST00000473643 RREB1Q92766 1687 aa12.12□□□□□ -0.47
SMG5-203ENST00000473643 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
SMG5-203ENST00000473643 FCHSD2O94868 740 aa12.11□□□□□ -0.47
SMG5-203ENST00000473643 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
SMG5-203ENST00000473643 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
SMG5-203ENST00000473643 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
SMG5-203ENST00000473643 RGPD3A6NKT7 1758 aaPredicted RBP12.1□□□□□ -0.47
SMG5-203ENST00000473643 RGPD4Q7Z3J3 1758 aa12.1□□□□□ -0.47
SMG5-203ENST00000473643 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
SMG5-203ENST00000473643 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
SMG5-203ENST00000473643 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMG5-203ENST00000473643 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMG5-203ENST00000473643 SLC15A2Q16348 729 aa12.1□□□□□ -0.47
SMG5-203ENST00000473643 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
SMG5-203ENST00000473643 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
SMG5-203ENST00000473643 LRRC4BQ9NT99 713 aa12.1□□□□□ -0.47
SMG5-203ENST00000473643 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
SMG5-203ENST00000473643 NUP188Q5SRE5 1749 aa12.09□□□□□ -0.47
SMG5-203ENST00000473643 KDRP35968 1356 aa12.09□□□□□ -0.47
SMG5-203ENST00000473643 STK32BQ9NY57 414 aa12.09□□□□□ -0.47
SMG5-203ENST00000473643 SPG7Q9UQ90 795 aa12.09□□□□□ -0.47
SMG5-203ENST00000473643 RGPD2P0DJD1 1756 aa12.09□□□□□ -0.47
SMG5-203ENST00000473643 FAM9BQ8IZU0 186 aa12.08□□□□□ -0.48
SMG5-203ENST00000473643 PDGFDQ9GZP0 370 aaPredicted RBP12.08□□□□□ -0.48
SMG5-203ENST00000473643 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
SMG5-203ENST00000473643 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
SMG5-203ENST00000473643 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
SMG5-203ENST00000473643 SULT6B1Q6IMI4 303 aa12.07□□□□□ -0.48
SMG5-203ENST00000473643 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
SMG5-203ENST00000473643 SPON1Q9HCB6 807 aa12.07□□□□□ -0.48
SMG5-203ENST00000473643 LRP5O75197 1615 aa12.07□□□□□ -0.48
SMG5-203ENST00000473643 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
SMG5-203ENST00000473643 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
SMG5-203ENST00000473643 AKT1S1Q96B36 256 aa12.06□□□□□ -0.48
SMG5-203ENST00000473643 HMOX1P09601 288 aa12.05□□□□□ -0.48
SMG5-203ENST00000473643 PHKG2P15735 406 aa12.05□□□□□ -0.48
SMG5-203ENST00000473643 MPRIPQ6WCQ1 1025 aa12.05□□□□□ -0.48
SMG5-203ENST00000473643 RUNDC1Q96C34 613 aa12.05□□□□□ -0.48
SMG5-203ENST00000473643 SHANK3Q9BYB0 1731 aa12.05□□□□□ -0.48
SMG5-203ENST00000473643 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
SMG5-203ENST00000473643 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
SMG5-203ENST00000473643 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
SMG5-203ENST00000473643 PIGBQ92521 554 aa12.04□□□□□ -0.48
SMG5-203ENST00000473643 BTAF1O14981 1849 aa12.04□□□□□ -0.48
SMG5-203ENST00000473643 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
SMG5-203ENST00000473643 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
SMG5-203ENST00000473643 KCNQ4P56696 695 aa12.03□□□□□ -0.48
SMG5-203ENST00000473643 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
SMG5-203ENST00000473643 PLEKHO1Q53GL0 409 aaPredicted RBP12.03□□□□□ -0.48
SMG5-203ENST00000473643 CCNL1Q9UK58 526 aaPredicted RBP12.03□□□□□ -0.48
SMG5-203ENST00000473643 HMGB2P26583 209 aaKnown RBP12.02□□□□□ -0.49
SMG5-203ENST00000473643 PTGER2P43116 358 aa12.02□□□□□ -0.49
SMG5-203ENST00000473643 SMARCC1Q92922 1105 aaPredicted RBP12.02□□□□□ -0.49
SMG5-203ENST00000473643 PHACTR3Q96KR7 559 aa12.02□□□□□ -0.49
SMG5-203ENST00000473643 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
SMG5-203ENST00000473643 HSP90AB1P08238 724 aaKnown RBP12.01□□□□□ -0.49
SMG5-203ENST00000473643 NGEFQ8N5V2 710 aa12.01□□□□□ -0.49
SMG5-203ENST00000473643 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
SMG5-203ENST00000473643 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
SMG5-203ENST00000473643 UTRNP46939 3433 aa12.01□□□□□ -0.49
SMG5-203ENST00000473643 PAPPAQ13219 1627 aa12□□□□□ -0.49
SMG5-203ENST00000473643 PKD1L3Q7Z443 1732 aa12□□□□□ -0.49
SMG5-203ENST00000473643 ERVV-2B6SEH9 535 aa12□□□□□ -0.49
SMG5-203ENST00000473643 NEFMP07197 916 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms