RNA–Protein interactions for RNA: ENST00000473381.1

UBASH3A-204, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 2

Gene UBASH3A, Length 2,754 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-204ENST00000473381 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
UBASH3A-204ENST00000473381 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
UBASH3A-204ENST00000473381 PLEKHM2Q8IWE5 1019 aa16.38■□□□□ 0.21
UBASH3A-204ENST00000473381 KIF2CQ99661 725 aa16.38■□□□□ 0.21
UBASH3A-204ENST00000473381 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
UBASH3A-204ENST00000473381 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
UBASH3A-204ENST00000473381 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 PTPRCP08575 1304 aa16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 NGDNQ8NEJ9 315 aaKnown RBP16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 MSH6P52701 1360 aa16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 CDC45O75419 566 aa16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 GSPT1P15170 499 aaKnown RBP16.37■□□□□ 0.21
UBASH3A-204ENST00000473381 FLT4P35916 1363 aa16.36■□□□□ 0.21
UBASH3A-204ENST00000473381 SLIT1O75093 1534 aa16.36■□□□□ 0.21
UBASH3A-204ENST00000473381 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
UBASH3A-204ENST00000473381 CEP85Q6P2H3 762 aa16.36■□□□□ 0.21
UBASH3A-204ENST00000473381 RPAP2Q8IXW5 612 aaPredicted RBP16.36■□□□□ 0.21
UBASH3A-204ENST00000473381 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
UBASH3A-204ENST00000473381 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
UBASH3A-204ENST00000473381 DIP2AQ14689 1571 aa16.35■□□□□ 0.21
UBASH3A-204ENST00000473381 DDIT3P35638 169 aa16.35■□□□□ 0.21
UBASH3A-204ENST00000473381 AMPHP49418 695 aa16.35■□□□□ 0.21
UBASH3A-204ENST00000473381 C16orf71Q8IYS4 520 aaPredicted RBP16.35■□□□□ 0.21
UBASH3A-204ENST00000473381 RTL1A6NKG5 1358 aa16.35■□□□□ 0.21
UBASH3A-204ENST00000473381 RIMS1Q86UR5 1692 aaKnown RBP16.34■□□□□ 0.21
UBASH3A-204ENST00000473381 MEIS3Q99687 375 aa16.34■□□□□ 0.21
UBASH3A-204ENST00000473381 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
UBASH3A-204ENST00000473381 HSP90AB1P08238 724 aaKnown RBP16.34■□□□□ 0.21
UBASH3A-204ENST00000473381 EYA1Q99502 592 aa16.34■□□□□ 0.21
UBASH3A-204ENST00000473381 FMN2Q9NZ56 1722 aa16.34■□□□□ 0.21
UBASH3A-204ENST00000473381 KDRP35968 1356 aa16.33■□□□□ 0.21
UBASH3A-204ENST00000473381 TTC22Q5TAA0 569 aa16.33■□□□□ 0.21
UBASH3A-204ENST00000473381 IGSF1Q8N6C5 1336 aa16.33■□□□□ 0.2
UBASH3A-204ENST00000473381 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
UBASH3A-204ENST00000473381 CD2BP2O95400 341 aaKnown RBP16.32■□□□□ 0.2
UBASH3A-204ENST00000473381 OTUD7AQ8TE49 926 aaPredicted RBP16.32■□□□□ 0.2
UBASH3A-204ENST00000473381 G2E3Q7L622 706 aa16.32■□□□□ 0.2
UBASH3A-204ENST00000473381 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
UBASH3A-204ENST00000473381 GAS2L2Q8NHY3 880 aa16.31■□□□□ 0.2
UBASH3A-204ENST00000473381 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
UBASH3A-204ENST00000473381 PIK3C2AO00443 1686 aa16.31■□□□□ 0.2
UBASH3A-204ENST00000473381 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
UBASH3A-204ENST00000473381 APBB1O00213 710 aa16.3■□□□□ 0.2
UBASH3A-204ENST00000473381 NLRP6P59044 892 aa16.3■□□□□ 0.2
UBASH3A-204ENST00000473381 THEMISQ8N1K5 641 aaPredicted RBP16.3■□□□□ 0.2
UBASH3A-204ENST00000473381 F6X3S4 739 aa16.3■□□□□ 0.2
UBASH3A-204ENST00000473381 SLC4A10Q6U841 1118 aa16.3■□□□□ 0.2
UBASH3A-204ENST00000473381 TRAK2O60296 914 aa16.29■□□□□ 0.2
UBASH3A-204ENST00000473381 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
UBASH3A-204ENST00000473381 CIZ1Q9ULV3 898 aaPredicted RBP16.29■□□□□ 0.2
UBASH3A-204ENST00000473381 K7ELQ4 463 aaPredicted RBP16.29■□□□□ 0.2
UBASH3A-204ENST00000473381 NUTM2GQ5VZR2 741 aa16.28■□□□□ 0.2
UBASH3A-204ENST00000473381 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
UBASH3A-204ENST00000473381 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
UBASH3A-204ENST00000473381 DDX11L8A8MPP1 907 aa16.27■□□□□ 0.2
UBASH3A-204ENST00000473381 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.2
UBASH3A-204ENST00000473381 CCT4P50991 539 aaKnown RBP16.27■□□□□ 0.2
UBASH3A-204ENST00000473381 TNPO1Q92973 898 aaKnown RBP16.27■□□□□ 0.2
UBASH3A-204ENST00000473381 HSP90AA1P07900 732 aaKnown RBP16.27■□□□□ 0.2
UBASH3A-204ENST00000473381 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.19
UBASH3A-204ENST00000473381 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
UBASH3A-204ENST00000473381 HTATSF1O43719 755 aaKnown RBP16.26■□□□□ 0.19
UBASH3A-204ENST00000473381 HMMRO75330 724 aa16.26■□□□□ 0.19
UBASH3A-204ENST00000473381 KCNA6P17658 529 aa16.26■□□□□ 0.19
UBASH3A-204ENST00000473381 SDSP20132 328 aa16.26■□□□□ 0.19
UBASH3A-204ENST00000473381 HOXC9P31274 260 aa16.26■□□□□ 0.19
UBASH3A-204ENST00000473381 STK31Q9BXU1 1019 aa16.26■□□□□ 0.19
UBASH3A-204ENST00000473381 RAB3GAP1Q15042 981 aa16.26■□□□□ 0.19
UBASH3A-204ENST00000473381 GNAT3A8MTJ3 354 aa16.25■□□□□ 0.19
UBASH3A-204ENST00000473381 GOLGA6L3A6NEY3 463 aa16.25■□□□□ 0.19
UBASH3A-204ENST00000473381 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
UBASH3A-204ENST00000473381 ARXQ96QS3 562 aa16.24■□□□□ 0.19
UBASH3A-204ENST00000473381 FER1L4A9Z1Z3 1794 aa16.24■□□□□ 0.19
UBASH3A-204ENST00000473381 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
UBASH3A-204ENST00000473381 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
UBASH3A-204ENST00000473381 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
UBASH3A-204ENST00000473381 RABEP1Q15276 862 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 NWD1Q149M9 1564 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 GNAI2P04899 355 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 FLIIQ13045 1269 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 CCDC30Q5VVM6 783 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 NECTIN2Q92692 538 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
UBASH3A-204ENST00000473381 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
UBASH3A-204ENST00000473381 MARF1Q9Y4F3 1742 aaKnown RBP16.22■□□□□ 0.19
UBASH3A-204ENST00000473381 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
UBASH3A-204ENST00000473381 FKBP5Q13451 457 aaPredicted RBP16.22■□□□□ 0.19
UBASH3A-204ENST00000473381 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
UBASH3A-204ENST00000473381 PDE1AP54750 535 aa16.2■□□□□ 0.18
UBASH3A-204ENST00000473381 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
UBASH3A-204ENST00000473381 EXOC6BQ9Y2D4 811 aa16.2■□□□□ 0.18
UBASH3A-204ENST00000473381 FAM208AQ9UK61 1670 aaKnown RBP16.2■□□□□ 0.18
UBASH3A-204ENST00000473381 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
UBASH3A-204ENST00000473381 OSBPL3Q9H4L5 887 aa16.2■□□□□ 0.18
UBASH3A-204ENST00000473381 GNAI3P08754 354 aa16.19■□□□□ 0.18
UBASH3A-204ENST00000473381 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms