RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 RPAP2Q8IXW5 612 aaPredicted RBP17.51■□□□□ 0.39
NHLRC3-204ENST00000473371 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
NHLRC3-204ENST00000473371 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
NHLRC3-204ENST00000473371 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
NHLRC3-204ENST00000473371 PREX1Q8TCU6 1659 aa17.5■□□□□ 0.39
NHLRC3-204ENST00000473371 DLG5Q8TDM6 1919 aa17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 FBXO31Q5XUX0 539 aaPredicted RBP17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 YEATS2Q9ULM3 1422 aa17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 CEP85Q6P2H3 762 aa17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 AGLP35573 1532 aa17.49■□□□□ 0.39
NHLRC3-204ENST00000473371 RBSNQ9H1K0 784 aa17.48■□□□□ 0.39
NHLRC3-204ENST00000473371 REC8O95072 547 aa17.48■□□□□ 0.39
NHLRC3-204ENST00000473371 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
NHLRC3-204ENST00000473371 OFD1O75665 1012 aa17.47■□□□□ 0.39
NHLRC3-204ENST00000473371 COG3Q96JB2 828 aa17.47■□□□□ 0.39
NHLRC3-204ENST00000473371 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
NHLRC3-204ENST00000473371 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
NHLRC3-204ENST00000473371 HAP1P54257 671 aaPredicted RBP17.47■□□□□ 0.39
NHLRC3-204ENST00000473371 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.39
NHLRC3-204ENST00000473371 KRT24Q2M2I5 525 aa17.46■□□□□ 0.39
NHLRC3-204ENST00000473371 RBM27Q9P2N5 1060 aaKnown RBP17.46■□□□□ 0.39
NHLRC3-204ENST00000473371 AATKQ6ZMQ8 1374 aa17.45■□□□□ 0.38
NHLRC3-204ENST00000473371 GPT2Q8TD30 523 aa17.45■□□□□ 0.38
NHLRC3-204ENST00000473371 MSH6P52701 1360 aa17.45■□□□□ 0.38
NHLRC3-204ENST00000473371 CPSF1Q10570 1443 aaKnown RBP17.45■□□□□ 0.38
NHLRC3-204ENST00000473371 ERC2O15083 957 aa17.45■□□□□ 0.38
NHLRC3-204ENST00000473371 HS1BP3Q53T59 392 aa17.45■□□□□ 0.38
NHLRC3-204ENST00000473371 MEIS3Q99687 375 aa17.44■□□□□ 0.38
NHLRC3-204ENST00000473371 ZDHHC9Q9Y397 364 aa17.44■□□□□ 0.38
NHLRC3-204ENST00000473371 RTL1A6NKG5 1358 aa17.44■□□□□ 0.38
NHLRC3-204ENST00000473371 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
NHLRC3-204ENST00000473371 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
NHLRC3-204ENST00000473371 RGS12O14924 1447 aa17.43■□□□□ 0.38
NHLRC3-204ENST00000473371 WASLO00401 505 aaPredicted RBP17.43■□□□□ 0.38
NHLRC3-204ENST00000473371 TSPOAP1O95153 1857 aa17.43■□□□□ 0.38
NHLRC3-204ENST00000473371 DLC1Q96QB1 1528 aa17.42■□□□□ 0.38
NHLRC3-204ENST00000473371 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
NHLRC3-204ENST00000473371 PDLIM2Q96JY6 352 aa17.42■□□□□ 0.38
NHLRC3-204ENST00000473371 HMMRO75330 724 aa17.42■□□□□ 0.38
NHLRC3-204ENST00000473371 AEBP1Q8IUX7 1158 aa17.42■□□□□ 0.38
NHLRC3-204ENST00000473371 NOL7Q9UMY1 257 aaKnown RBP17.42■□□□□ 0.38
NHLRC3-204ENST00000473371 PTPRCP08575 1304 aa17.41■□□□□ 0.38
NHLRC3-204ENST00000473371 SULT6B1Q6IMI4 303 aa17.41■□□□□ 0.38
NHLRC3-204ENST00000473371 PDCL3Q9H2J4 239 aa17.41■□□□□ 0.38
NHLRC3-204ENST00000473371 TMEM63CQ9P1W3 806 aa17.41■□□□□ 0.38
NHLRC3-204ENST00000473371 CHL1O00533 1208 aa17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 NEK4P51957 841 aa17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 LRSAM1Q6UWE0 723 aa17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 MCM10Q7L590 875 aa17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 R3HCC1Q9Y3T6 440 aaKnown RBP17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 SYCE3A1L190 88 aa17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 NUDT16Q96DE0 195 aaKnown RBP17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 ZMYND15Q9H091 742 aa17.4■□□□□ 0.38
NHLRC3-204ENST00000473371 NCKAP5LQ9HCH0 1330 aa17.39■□□□□ 0.37
NHLRC3-204ENST00000473371 SLC4A2P04920 1241 aa17.39■□□□□ 0.37
NHLRC3-204ENST00000473371 PDE1AP54750 535 aa17.39■□□□□ 0.37
NHLRC3-204ENST00000473371 ZNF500O60304 480 aaPredicted RBP17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 TERF1P54274 439 aa17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 CPS1P31327 1500 aa17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 KIAA0232Q92628 1395 aa17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 NSFL1CQ9UNZ2 370 aaKnown RBP17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 MBD3O95983 291 aa17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 XPCQ01831 940 aaPredicted RBP17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 PKNOX2Q96KN3 472 aa17.38■□□□□ 0.37
NHLRC3-204ENST00000473371 EIF4A2Q14240 407 aaKnown RBP17.37■□□□□ 0.37
NHLRC3-204ENST00000473371 OSBPL3Q9H4L5 887 aa17.37■□□□□ 0.37
NHLRC3-204ENST00000473371 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.37■□□□□ 0.37
NHLRC3-204ENST00000473371 ZKSCAN5Q9Y2L8 839 aa17.36■□□□□ 0.37
NHLRC3-204ENST00000473371 CCDC61Q9Y6R9 512 aa17.36■□□□□ 0.37
NHLRC3-204ENST00000473371 MCCP23508 829 aa17.36■□□□□ 0.37
NHLRC3-204ENST00000473371 MCM2P49736 904 aa17.36■□□□□ 0.37
NHLRC3-204ENST00000473371 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
NHLRC3-204ENST00000473371 TXNDC2Q86VQ3 553 aa17.36■□□□□ 0.37
NHLRC3-204ENST00000473371 NOL8Q76FK4 1167 aaKnown RBP17.35■□□□□ 0.37
NHLRC3-204ENST00000473371 RNF214Q8ND24 703 aa17.35■□□□□ 0.37
NHLRC3-204ENST00000473371 CCDC39Q9UFE4 941 aa17.35■□□□□ 0.37
NHLRC3-204ENST00000473371 F6X3S4 739 aa17.34■□□□□ 0.37
NHLRC3-204ENST00000473371 TSHZ3Q63HK5 1081 aa17.34■□□□□ 0.37
NHLRC3-204ENST00000473371 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
NHLRC3-204ENST00000473371 BRD1O95696 1058 aa17.34■□□□□ 0.37
NHLRC3-204ENST00000473371 ESYT1Q9BSJ8 1104 aa17.34■□□□□ 0.37
NHLRC3-204ENST00000473371 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
NHLRC3-204ENST00000473371 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.37
NHLRC3-204ENST00000473371 G2E3Q7L622 706 aa17.33■□□□□ 0.37
NHLRC3-204ENST00000473371 MCM5P33992 734 aa17.33■□□□□ 0.36
NHLRC3-204ENST00000473371 CSPP1Q1MSJ5 1256 aa17.33■□□□□ 0.36
NHLRC3-204ENST00000473371 A2ML1A8K2U0 1454 aa17.33■□□□□ 0.36
NHLRC3-204ENST00000473371 GNAI2P04899 355 aa17.32■□□□□ 0.36
NHLRC3-204ENST00000473371 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
NHLRC3-204ENST00000473371 FAM13BQ9NYF5 915 aa17.32■□□□□ 0.36
NHLRC3-204ENST00000473371 MON2Q7Z3U7 1717 aa17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 CUL4AQ13619 759 aa17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms