RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 KIF3CO14782 793 aa12.58□□□□□ -0.4
SMC4-214ENST00000472991 PPP1R37O75864 691 aa12.58□□□□□ -0.4
SMC4-214ENST00000472991 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
SMC4-214ENST00000472991 SLIT3O75094 1523 aa12.57□□□□□ -0.4
SMC4-214ENST00000472991 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
SMC4-214ENST00000472991 RGPD5Q99666 1765 aa12.57□□□□□ -0.4
SMC4-214ENST00000472991 NUTM2BA6NNL0 878 aaPredicted RBP12.57□□□□□ -0.4
SMC4-214ENST00000472991 NUTM2EB1AL46 878 aaPredicted RBP12.57□□□□□ -0.4
SMC4-214ENST00000472991 NUTM2GQ5VZR2 741 aa12.57□□□□□ -0.4
SMC4-214ENST00000472991 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
SMC4-214ENST00000472991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.46e-65■■■■■ 143.5
SMC4-214ENST00000472991 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
SMC4-214ENST00000472991 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
SMC4-214ENST00000472991 TTC21AQ8NDW8 1320 aa12.57□□□□□ -0.4
SMC4-214ENST00000472991 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
SMC4-214ENST00000472991 NWD2Q9ULI1 1742 aa12.55□□□□□ -0.4
SMC4-214ENST00000472991 COL14A1Q05707 1796 aaKnown RBP12.55□□□□□ -0.4
SMC4-214ENST00000472991 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
SMC4-214ENST00000472991 MAP2P11137 1827 aaKnown RBP12.54□□□□□ -0.4
SMC4-214ENST00000472991 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
SMC4-214ENST00000472991 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
SMC4-214ENST00000472991 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
SMC4-214ENST00000472991 NME9Q86XW9 330 aa12.54□□□□□ -0.4
SMC4-214ENST00000472991 USP19O94966 1318 aa12.54□□□□□ -0.4
SMC4-214ENST00000472991 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
SMC4-214ENST00000472991 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
SMC4-214ENST00000472991 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
SMC4-214ENST00000472991 NFAT5O94916 1531 aa12.53□□□□□ -0.4
SMC4-214ENST00000472991 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
SMC4-214ENST00000472991 MEX3CQ5U5Q3 659 aaKnown RBP12.53□□□□□ -0.4
SMC4-214ENST00000472991 NLRP13Q86W25 1043 aa12.53□□□□□ -0.4
SMC4-214ENST00000472991 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
SMC4-214ENST00000472991 PANK3Q9H999 370 aa12.53□□□□□ -0.4
SMC4-214ENST00000472991 COL18A1P39060 1754 aa12.52□□□□□ -0.41
SMC4-214ENST00000472991 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
SMC4-214ENST00000472991 LMO7Q8WWI1 1683 aa12.51□□□□□ -0.41
SMC4-214ENST00000472991 KRTAP3-3Q9BYR6 98 aa12.51□□□□□ -0.41
SMC4-214ENST00000472991 KRTAP3-2Q9BYR7 98 aa12.51□□□□□ -0.41
SMC4-214ENST00000472991 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
SMC4-214ENST00000472991 ERBB3P21860 1342 aa12.49□□□□□ -0.41
SMC4-214ENST00000472991 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
SMC4-214ENST00000472991 GGNBP2Q9H3C7 697 aa12.49□□□□□ -0.41
SMC4-214ENST00000472991 KIAA0232Q92628 1395 aa12.48□□□□□ -0.41
SMC4-214ENST00000472991 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
SMC4-214ENST00000472991 FYB1O15117 783 aa12.48□□□□□ -0.41
SMC4-214ENST00000472991 SPNS2Q8IVW8 549 aa12.48□□□□□ -0.41
SMC4-214ENST00000472991 SLIT2O94813 1529 aa12.47□□□□□ -0.41
SMC4-214ENST00000472991 AFF2P51816 1311 aa12.47□□□□□ -0.41
SMC4-214ENST00000472991 GCP02774 474 aa12.47□□□□□ -0.41
SMC4-214ENST00000472991 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
SMC4-214ENST00000472991 COG3Q96JB2 828 aa12.47□□□□□ -0.41
SMC4-214ENST00000472991 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
SMC4-214ENST00000472991 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 CPDO75976 1380 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 ARSIQ5FYB1 569 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 NGLY1Q96IV0 654 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 PRDM11Q9NQV5 511 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 KNSTRNQ9Y448 316 aa12.46□□□□□ -0.41
SMC4-214ENST00000472991 ABCC6O95255 1503 aa12.46□□□□□ -0.42
SMC4-214ENST00000472991 NSD2O96028 1365 aa12.45□□□□□ -0.42
SMC4-214ENST00000472991 CAMTA1Q9Y6Y1 1673 aa12.45□□□□□ -0.42
SMC4-214ENST00000472991 CHRNA2Q15822 529 aa12.45□□□□□ -0.42
SMC4-214ENST00000472991 KCNH5Q8NCM2 988 aa12.45□□□□□ -0.42
SMC4-214ENST00000472991 WNK3Q9BYP7 1800 aa12.45□□□□□ -0.42
SMC4-214ENST00000472991 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
SMC4-214ENST00000472991 PER1O15534 1290 aaPredicted RBP12.44□□□□□ -0.42
SMC4-214ENST00000472991 VARS2Q5ST30 1063 aaKnown RBP12.44□□□□□ -0.42
SMC4-214ENST00000472991 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
SMC4-214ENST00000472991 FAM208AQ9UK61 1670 aaKnown RBP12.44□□□□□ -0.42
SMC4-214ENST00000472991 ZNF316A6NFI3 1004 aaPredicted RBP12.43□□□□□ -0.42
SMC4-214ENST00000472991 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
SMC4-214ENST00000472991 RGS17Q9UGC6 210 aaPredicted RBP12.43□□□□□ -0.42
SMC4-214ENST00000472991 FBLN1P23142 703 aa12.42□□□□□ -0.42
SMC4-214ENST00000472991 ARHGEF25Q86VW2 580 aa12.42□□□□□ -0.42
SMC4-214ENST00000472991 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
SMC4-214ENST00000472991 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.423e-15■■■■■ 43.1
SMC4-214ENST00000472991 BTG4Q9NY30 223 aa12.42□□□□□ -0.42
SMC4-214ENST00000472991 USP21Q9UK80 565 aa12.42□□□□□ -0.42
SMC4-214ENST00000472991 GLI3P10071 1580 aa12.42□□□□□ -0.42
SMC4-214ENST00000472991 AATKQ6ZMQ8 1374 aa12.42□□□□□ -0.42
SMC4-214ENST00000472991 COL5A2P05997 1499 aaPredicted RBP12.41□□□□□ -0.42
SMC4-214ENST00000472991 ATRNO75882 1429 aa12.41□□□□□ -0.42
SMC4-214ENST00000472991 SLC34A2O95436 690 aa12.41□□□□□ -0.42
SMC4-214ENST00000472991 MMRN1Q13201 1228 aa12.41□□□□□ -0.42
SMC4-214ENST00000472991 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
SMC4-214ENST00000472991 MAP3K19Q56UN5 1328 aa12.4□□□□□ -0.42
SMC4-214ENST00000472991 BRWD3Q6RI45 1802 aa12.4□□□□□ -0.42
SMC4-214ENST00000472991 RRS1Q15050 365 aaKnown RBP12.4□□□□□ -0.42
SMC4-214ENST00000472991 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
SMC4-214ENST00000472991 ZNF772Q68DY9 489 aaPredicted RBP12.4□□□□□ -0.42
SMC4-214ENST00000472991 UNC5CLQ8IV45 518 aa12.4□□□□□ -0.42
SMC4-214ENST00000472991 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
SMC4-214ENST00000472991 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
SMC4-214ENST00000472991 CNGB1Q14028 1251 aaPredicted RBP12.39□□□□□ -0.43
SMC4-214ENST00000472991 POTEAQ6S8J7 498 aa12.39□□□□□ -0.43
SMC4-214ENST00000472991 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
SMC4-214ENST00000472991 RTL1A6NKG5 1358 aa12.39□□□□□ -0.43
SMC4-214ENST00000472991 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms