RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 RGPD2P0DJD1 1756 aa22.04■■□□□ 1.12
CCDC142-205ENST00000472962 A0A1W2PP64 1363 aa22.03■■□□□ 1.12
CCDC142-205ENST00000472962 COG3Q96JB2 828 aa22.02■■□□□ 1.12
CCDC142-205ENST00000472962 NLGN2Q8NFZ4 835 aa22.01■■□□□ 1.11
CCDC142-205ENST00000472962 CCNL1Q9UK58 526 aaPredicted RBP22.01■■□□□ 1.11
CCDC142-205ENST00000472962 LY75O60449 1722 aa22■■□□□ 1.11
CCDC142-205ENST00000472962 ZCRB1Q8TBF4 217 aaKnown RBP22■■□□□ 1.11
CCDC142-205ENST00000472962 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
CCDC142-205ENST00000472962 USP47Q96K76 1375 aa21.98■■□□□ 1.11
CCDC142-205ENST00000472962 GRIN3BO60391 1043 aa21.97■■□□□ 1.11
CCDC142-205ENST00000472962 COL24A1Q17RW2 1714 aa21.97■■□□□ 1.11
CCDC142-205ENST00000472962 GOLGB1Q14789 3259 aaKnown RBP21.96■■□□□ 1.11
CCDC142-205ENST00000472962 FBLN1P23142 703 aa21.96■■□□□ 1.11
CCDC142-205ENST00000472962 HOXC9P31274 260 aa21.96■■□□□ 1.11
CCDC142-205ENST00000472962 MSL1Q68DK7 614 aa21.95■■□□□ 1.1
CCDC142-205ENST00000472962 MAP3K19Q56UN5 1328 aa21.95■■□□□ 1.1
CCDC142-205ENST00000472962 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
CCDC142-205ENST00000472962 TONSLQ96HA7 1378 aa21.94■■□□□ 1.1
CCDC142-205ENST00000472962 RAPGEF4Q8WZA2 1011 aa21.93■■□□□ 1.1
CCDC142-205ENST00000472962 COL23A1Q86Y22 540 aaPredicted RBP21.92■■□□□ 1.1
CCDC142-205ENST00000472962 USHBP1Q8N6Y0 703 aa21.92■■□□□ 1.1
CCDC142-205ENST00000472962 MEGF6O75095 1541 aa21.91■■□□□ 1.1
CCDC142-205ENST00000472962 SMG6Q86US8 1419 aaKnown RBP21.91■■□□□ 1.1
CCDC142-205ENST00000472962 YBX3P16989 372 aaKnown RBP eCLIP21.91■■□□□ 1.1
CCDC142-205ENST00000472962 C5P01031 1676 aa21.91■■□□□ 1.1
CCDC142-205ENST00000472962 NSD2O96028 1365 aa21.9■■□□□ 1.1
CCDC142-205ENST00000472962 RRS1Q15050 365 aaKnown RBP21.9■■□□□ 1.1
CCDC142-205ENST00000472962 PUS7Q96PZ0 661 aaKnown RBP21.9■■□□□ 1.1
CCDC142-205ENST00000472962 TATP17735 454 aaPredicted RBP21.89■■□□□ 1.09
CCDC142-205ENST00000472962 HMGB2P26583 209 aaKnown RBP21.87■■□□□ 1.09
CCDC142-205ENST00000472962 NBPF6Q5VWK0 638 aa21.87■■□□□ 1.09
CCDC142-205ENST00000472962 MPRIPQ6WCQ1 1025 aa21.87■■□□□ 1.09
CCDC142-205ENST00000472962 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
CCDC142-205ENST00000472962 CGNL1Q0VF96 1302 aa21.86■■□□□ 1.09
CCDC142-205ENST00000472962 ST20-MTHFSA0A0A6YYL1 179 aa21.86■■□□□ 1.09
CCDC142-205ENST00000472962 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
CCDC142-205ENST00000472962 FLAD1Q8NFF5 587 aa21.85■■□□□ 1.09
CCDC142-205ENST00000472962 ZNF526Q8TF50 670 aaPredicted RBP21.85■■□□□ 1.09
CCDC142-205ENST00000472962 GGNBP2Q9H3C7 697 aa21.85■■□□□ 1.09
CCDC142-205ENST00000472962 GPBP1L1Q9HC44 474 aaPredicted RBP21.85■■□□□ 1.09
CCDC142-205ENST00000472962 RTL1A6NKG5 1358 aa21.85■■□□□ 1.09
CCDC142-205ENST00000472962 SLC24A1O60721 1099 aa21.84■■□□□ 1.09
CCDC142-205ENST00000472962 PCDH11XQ9BZA7 1347 aa21.83■■□□□ 1.09
CCDC142-205ENST00000472962 PCDH11YQ9BZA8 1340 aa21.83■■□□□ 1.09
CCDC142-205ENST00000472962 ATP10DQ9P241 1426 aa21.83■■□□□ 1.09
CCDC142-205ENST00000472962 AK7Q96M32 723 aa21.83■■□□□ 1.09
CCDC142-205ENST00000472962 WWC3Q9ULE0 1092 aa21.82■■□□□ 1.08
CCDC142-205ENST00000472962 CD2APQ9Y5K6 639 aa21.82■■□□□ 1.08
CCDC142-205ENST00000472962 PALLDQ8WX93 1383 aa21.82■■□□□ 1.08
CCDC142-205ENST00000472962 ITGB4P16144 1822 aa21.82■■□□□ 1.08
CCDC142-205ENST00000472962 PHF14O94880 888 aa21.81■■□□□ 1.08
CCDC142-205ENST00000472962 KIF20BQ96Q89 1820 aa21.8■■□□□ 1.08
CCDC142-205ENST00000472962 IFFO2Q5TF58 517 aa21.8■■□□□ 1.08
CCDC142-205ENST00000472962 TESK2Q96S53 571 aa21.8■■□□□ 1.08
CCDC142-205ENST00000472962 HSP90AB2PQ58FF8 381 aa21.79■■□□□ 1.08
CCDC142-205ENST00000472962 C4BP0C0L5 1744 aa21.78■■□□□ 1.08
CCDC142-205ENST00000472962 FYB1O15117 783 aa21.78■■□□□ 1.08
CCDC142-205ENST00000472962 SMARCC1Q92922 1105 aaPredicted RBP21.78■■□□□ 1.08
CCDC142-205ENST00000472962 TMF1P82094 1093 aa21.77■■□□□ 1.08
CCDC142-205ENST00000472962 PPM1GO15355 546 aaPredicted RBP21.76■■□□□ 1.07
CCDC142-205ENST00000472962 IGSF1Q8N6C5 1336 aa21.75■■□□□ 1.07
CCDC142-205ENST00000472962 INSRP06213 1382 aa21.74■■□□□ 1.07
CCDC142-205ENST00000472962 FLT4P35916 1363 aa21.74■■□□□ 1.07
CCDC142-205ENST00000472962 UBR3Q6ZT12 1888 aa21.74■■□□□ 1.07
CCDC142-205ENST00000472962 CEP350Q5VT06 3117 aa21.74■■□□□ 1.07
CCDC142-205ENST00000472962 TOGARAM1Q9Y4F4 1720 aa21.73■■□□□ 1.07
CCDC142-205ENST00000472962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.73■■□□□ 1.07
CCDC142-205ENST00000472962 SMIM5Q71RC9 77 aa21.73■■□□□ 1.07
CCDC142-205ENST00000472962 NSD3Q9BZ95 1437 aa21.72■■□□□ 1.07
CCDC142-205ENST00000472962 CYP27B1O15528 508 aa21.72■■□□□ 1.07
CCDC142-205ENST00000472962 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
CCDC142-205ENST00000472962 HSPA6P17066 643 aa21.7■■□□□ 1.06
CCDC142-205ENST00000472962 CDCA8Q53HL2 280 aa21.69■■□□□ 1.06
CCDC142-205ENST00000472962 PIGBQ92521 554 aa21.69■■□□□ 1.06
CCDC142-205ENST00000472962 TMOD3Q9NYL9 352 aa21.69■■□□□ 1.06
CCDC142-205ENST00000472962 PKD1L3Q7Z443 1732 aa21.69■■□□□ 1.06
CCDC142-205ENST00000472962 AMIGO3Q86WK7 504 aa21.68■■□□□ 1.06
CCDC142-205ENST00000472962 EMILIN1Q9Y6C2 1016 aa21.68■■□□□ 1.06
CCDC142-205ENST00000472962 MAP2P11137 1827 aaKnown RBP21.67■■□□□ 1.06
CCDC142-205ENST00000472962 KIF24Q5T7B8 1368 aa21.67■■□□□ 1.06
CCDC142-205ENST00000472962 LOC102724428A0A0B4J2F2 783 aa21.67■■□□□ 1.06
CCDC142-205ENST00000472962 GNPATO15228 680 aa21.67■■□□□ 1.06
CCDC142-205ENST00000472962 SSFA2P28290 1259 aa21.67■■□□□ 1.06
CCDC142-205ENST00000472962 SIK1P57059 783 aa21.67■■□□□ 1.06
CCDC142-205ENST00000472962 ATP6V1AP38606 617 aa21.66■■□□□ 1.06
CCDC142-205ENST00000472962 LINC00116Q8NCU8 138 aa21.65■■□□□ 1.06
CCDC142-205ENST00000472962 ADCY9O60503 1353 aa21.64■■□□□ 1.06
CCDC142-205ENST00000472962 N4BP2Q86UW6 1770 aaPredicted RBP21.62■■□□□ 1.05
CCDC142-205ENST00000472962 ASAP1Q9ULH1 1129 aa21.62■■□□□ 1.05
CCDC142-205ENST00000472962 MMP10P09238 476 aa21.61■■□□□ 1.05
CCDC142-205ENST00000472962 IFNL2Q8IZJ0 200 aa21.61■■□□□ 1.05
CCDC142-205ENST00000472962 BCS1LQ9Y276 419 aa21.61■■□□□ 1.05
CCDC142-205ENST00000472962 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
CCDC142-205ENST00000472962 ITPK1Q13572 414 aa21.59■■□□□ 1.05
CCDC142-205ENST00000472962 TRAPPC3LQ5T215 181 aa21.59■■□□□ 1.05
CCDC142-205ENST00000472962 POLR3GLQ9BT43 218 aa21.59■■□□□ 1.05
CCDC142-205ENST00000472962 EYA1Q99502 592 aa21.58■■□□□ 1.05
CCDC142-205ENST00000472962 RBM42Q9BTD8 480 aaKnown RBP21.58■■□□□ 1.05
CCDC142-205ENST00000472962 RTCBQ9Y3I0 505 aaKnown RBP21.58■■□□□ 1.05
CCDC142-205ENST00000472962 ARHGAP27Q6ZUM4 889 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms