RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 KIF20BQ96Q89 1820 aa21.19■□□□□ 0.98
VTI1A-203ENST00000472892 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
VTI1A-203ENST00000472892 MEGF6O75095 1541 aa21.19■□□□□ 0.98
VTI1A-203ENST00000472892 RGPD2P0DJD1 1756 aa21.18■□□□□ 0.98
VTI1A-203ENST00000472892 USHBP1Q8N6Y0 703 aa21.18■□□□□ 0.98
VTI1A-203ENST00000472892 HSPA5P11021 654 aaKnown RBP21.17■□□□□ 0.98
VTI1A-203ENST00000472892 PRIM1P49642 420 aaKnown RBP21.17■□□□□ 0.98
VTI1A-203ENST00000472892 EMILIN1Q9Y6C2 1016 aa21.17■□□□□ 0.98
VTI1A-203ENST00000472892 CASZ1Q86V15 1759 aa21.17■□□□□ 0.98
VTI1A-203ENST00000472892 BTAF1O14981 1849 aa21.16■□□□□ 0.98
VTI1A-203ENST00000472892 RAPGEF4Q8WZA2 1011 aa21.16■□□□□ 0.98
VTI1A-203ENST00000472892 LRRC4BQ9NT99 713 aa21.16■□□□□ 0.98
VTI1A-203ENST00000472892 PPP1R1BQ9UD71 204 aaPredicted RBP21.16■□□□□ 0.98
VTI1A-203ENST00000472892 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
VTI1A-203ENST00000472892 ZBTB7AO95365 584 aa21.14■□□□□ 0.97
VTI1A-203ENST00000472892 TATP17735 454 aaPredicted RBP21.14■□□□□ 0.97
VTI1A-203ENST00000472892 SLC27A3Q5K4L6 730 aa21.14■□□□□ 0.97
VTI1A-203ENST00000472892 SYTL4Q96C24 671 aaPredicted RBP21.13■□□□□ 0.97
VTI1A-203ENST00000472892 KAT6BQ8WYB5 2073 aa21.13■□□□□ 0.97
VTI1A-203ENST00000472892 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
VTI1A-203ENST00000472892 PTGER2P43116 358 aa21.12■□□□□ 0.97
VTI1A-203ENST00000472892 SHANK3Q9BYB0 1731 aa21.12■□□□□ 0.97
VTI1A-203ENST00000472892 NSD2O96028 1365 aa21.11■□□□□ 0.97
VTI1A-203ENST00000472892 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
VTI1A-203ENST00000472892 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
VTI1A-203ENST00000472892 ATF5Q9Y2D1 282 aaPredicted RBP21.11■□□□□ 0.97
VTI1A-203ENST00000472892 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
VTI1A-203ENST00000472892 ZNF827Q17R98 1081 aa21.1■□□□□ 0.97
VTI1A-203ENST00000472892 AKT1S1Q96B36 256 aa21.1■□□□□ 0.97
VTI1A-203ENST00000472892 MTFR1LQ9H019 292 aa21.1■□□□□ 0.97
VTI1A-203ENST00000472892 PANK3Q9H999 370 aa21.1■□□□□ 0.97
VTI1A-203ENST00000472892 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.97
VTI1A-203ENST00000472892 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.97
VTI1A-203ENST00000472892 NCAPD2Q15021 1401 aa21.07■□□□□ 0.96
VTI1A-203ENST00000472892 SGIP1Q9BQI5 828 aa21.07■□□□□ 0.96
VTI1A-203ENST00000472892 CYP27B1O15528 508 aa21.06■□□□□ 0.96
VTI1A-203ENST00000472892 EYA1Q99502 592 aa21.06■□□□□ 0.96
VTI1A-203ENST00000472892 DOT1LQ8TEK3 1739 aa21.06■□□□□ 0.96
VTI1A-203ENST00000472892 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
VTI1A-203ENST00000472892 KCNQ4P56696 695 aa21.05■□□□□ 0.96
VTI1A-203ENST00000472892 TNNT2P45379 298 aaPredicted RBP21.04■□□□□ 0.96
VTI1A-203ENST00000472892 MAP2P11137 1827 aaKnown RBP21.04■□□□□ 0.96
VTI1A-203ENST00000472892 CCNL1Q9UK58 526 aaPredicted RBP21.03■□□□□ 0.96
VTI1A-203ENST00000472892 NKX1-1Q15270 411 aaPredicted RBP21.02■□□□□ 0.96
VTI1A-203ENST00000472892 SLC16A10Q8TF71 515 aa21.02■□□□□ 0.96
VTI1A-203ENST00000472892 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.02■□□□□ 0.96
VTI1A-203ENST00000472892 SPG7Q9UQ90 795 aa21.02■□□□□ 0.96
VTI1A-203ENST00000472892 LY75O60449 1722 aa21.01■□□□□ 0.95
VTI1A-203ENST00000472892 EIF4A2Q14240 407 aaKnown RBP21.01■□□□□ 0.95
VTI1A-203ENST00000472892 TFCP2L1Q9NZI6 479 aa21.01■□□□□ 0.95
VTI1A-203ENST00000472892 PNPLA7Q6ZV29 1317 aa21.01■□□□□ 0.95
VTI1A-203ENST00000472892 DCAF8L1A6NGE4 600 aa21■□□□□ 0.95
VTI1A-203ENST00000472892 MPRIPQ6WCQ1 1025 aa21■□□□□ 0.95
VTI1A-203ENST00000472892 SYT17Q9BSW7 474 aa21■□□□□ 0.95
VTI1A-203ENST00000472892 ARXQ96QS3 562 aa20.99■□□□□ 0.95
VTI1A-203ENST00000472892 FHDC1Q9C0D6 1143 aaPredicted RBP20.99■□□□□ 0.95
VTI1A-203ENST00000472892 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
VTI1A-203ENST00000472892 HMGB2P26583 209 aaKnown RBP20.97■□□□□ 0.95
VTI1A-203ENST00000472892 QSER1Q2KHR3 1735 aa20.96■□□□□ 0.95
VTI1A-203ENST00000472892 MORC1Q86VD1 984 aa20.96■□□□□ 0.95
VTI1A-203ENST00000472892 PIGBQ92521 554 aa20.96■□□□□ 0.95
VTI1A-203ENST00000472892 SMARCC1Q92922 1105 aaPredicted RBP20.95■□□□□ 0.94
VTI1A-203ENST00000472892 KNSTRNQ9Y448 316 aa20.95■□□□□ 0.94
VTI1A-203ENST00000472892 PALLDQ8WX93 1383 aa20.95■□□□□ 0.94
VTI1A-203ENST00000472892 PLEKHG2Q9H7P9 1386 aa20.95■□□□□ 0.94
VTI1A-203ENST00000472892 PHKG2P15735 406 aa20.94■□□□□ 0.94
VTI1A-203ENST00000472892 IFNL2Q8IZJ0 200 aa20.94■□□□□ 0.94
VTI1A-203ENST00000472892 IGSF1Q8N6C5 1336 aa20.94■□□□□ 0.94
VTI1A-203ENST00000472892 KIF7Q2M1P5 1343 aa20.93■□□□□ 0.94
VTI1A-203ENST00000472892 MAP3K5Q99683 1374 aa20.93■□□□□ 0.94
VTI1A-203ENST00000472892 YY1P25490 414 aa20.92■□□□□ 0.94
VTI1A-203ENST00000472892 POLD1P28340 1107 aa20.92■□□□□ 0.94
VTI1A-203ENST00000472892 COL23A1Q86Y22 540 aaPredicted RBP20.92■□□□□ 0.94
VTI1A-203ENST00000472892 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
VTI1A-203ENST00000472892 AMER1Q5JTC6 1135 aaPredicted RBP20.91■□□□□ 0.94
VTI1A-203ENST00000472892 ITGB4P16144 1822 aa20.9■□□□□ 0.94
VTI1A-203ENST00000472892 COL24A1Q17RW2 1714 aa20.9■□□□□ 0.94
VTI1A-203ENST00000472892 TMOD3Q9NYL9 352 aa20.89■□□□□ 0.93
VTI1A-203ENST00000472892 TUBGCP6Q96RT7 1819 aa20.89■□□□□ 0.93
VTI1A-203ENST00000472892 FLAD1Q8NFF5 587 aa20.88■□□□□ 0.93
VTI1A-203ENST00000472892 PER1O15534 1290 aaPredicted RBP20.87■□□□□ 0.93
VTI1A-203ENST00000472892 PLEKHO1Q53GL0 409 aaPredicted RBP20.87■□□□□ 0.93
VTI1A-203ENST00000472892 C5P01031 1676 aa20.86■□□□□ 0.93
VTI1A-203ENST00000472892 LOC102724428A0A0B4J2F2 783 aa20.86■□□□□ 0.93
VTI1A-203ENST00000472892 SIK1P57059 783 aa20.86■□□□□ 0.93
VTI1A-203ENST00000472892 AMOTQ4VCS5 1084 aa20.86■□□□□ 0.93
VTI1A-203ENST00000472892 ASAP1Q9ULH1 1129 aa20.86■□□□□ 0.93
VTI1A-203ENST00000472892 ERVV-2B6SEH9 535 aa20.85■□□□□ 0.93
VTI1A-203ENST00000472892 IL13P35225 146 aa20.85■□□□□ 0.93
VTI1A-203ENST00000472892 DCAF5Q96JK2 942 aa20.85■□□□□ 0.93
VTI1A-203ENST00000472892 HSP90AB1P08238 724 aaKnown RBP20.84■□□□□ 0.93
VTI1A-203ENST00000472892 AEBP1Q8IUX7 1158 aa20.84■□□□□ 0.93
VTI1A-203ENST00000472892 ATG3Q9NT62 314 aa20.84■□□□□ 0.93
VTI1A-203ENST00000472892 UTRNP46939 3433 aa20.84■□□□□ 0.93
VTI1A-203ENST00000472892 TAF1LQ8IZX4 1826 aa20.83■□□□□ 0.93
VTI1A-203ENST00000472892 AK7Q96M32 723 aa20.83■□□□□ 0.93
VTI1A-203ENST00000472892 SULT6B1Q6IMI4 303 aa20.82■□□□□ 0.92
VTI1A-203ENST00000472892 AMIGO3Q86WK7 504 aa20.82■□□□□ 0.92
VTI1A-203ENST00000472892 LINC00116Q8NCU8 138 aa20.82■□□□□ 0.92
VTI1A-203ENST00000472892 C4BP0C0L5 1744 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms