RNA–Protein interactions for RNA: ENST00000472746.2

CCDC180-203, Transcript of coiled-coil domain containing 180, humanhuman

TSL 4

Gene CCDC180, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-203ENST00000472746 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
CCDC180-203ENST00000472746 UPF1Q92900 1129 aaKnown RBP eCLIP18.71■□□□□ 0.59
CCDC180-203ENST00000472746 LRRC37A3O60309 1634 aa18.71■□□□□ 0.58
CCDC180-203ENST00000472746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCDC180-203ENST00000472746 PCDH11XQ9BZA7 1347 aa18.7■□□□□ 0.58
CCDC180-203ENST00000472746 PCDH11YQ9BZA8 1340 aa18.7■□□□□ 0.58
CCDC180-203ENST00000472746 HMOX1P09601 288 aa18.69■□□□□ 0.58
CCDC180-203ENST00000472746 PLEKHO1Q53GL0 409 aaPredicted RBP18.69■□□□□ 0.58
CCDC180-203ENST00000472746 PLEKHG2Q9H7P9 1386 aa18.68■□□□□ 0.58
CCDC180-203ENST00000472746 WNK3Q9BYP7 1800 aa18.68■□□□□ 0.58
CCDC180-203ENST00000472746 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
CCDC180-203ENST00000472746 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCDC180-203ENST00000472746 AMOTQ4VCS5 1084 aa18.68■□□□□ 0.58
CCDC180-203ENST00000472746 AEBP1Q8IUX7 1158 aa18.68■□□□□ 0.58
CCDC180-203ENST00000472746 COL3A1P02461 1466 aaPredicted RBP18.68■□□□□ 0.58
CCDC180-203ENST00000472746 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
CCDC180-203ENST00000472746 RGPD2P0DJD1 1756 aa18.67■□□□□ 0.58
CCDC180-203ENST00000472746 KDRP35968 1356 aa18.67■□□□□ 0.58
CCDC180-203ENST00000472746 TRIM37O94972 964 aa18.66■□□□□ 0.58
CCDC180-203ENST00000472746 BCL9O00512 1426 aa18.65■□□□□ 0.58
CCDC180-203ENST00000472746 NEFMP07197 916 aa18.64■□□□□ 0.57
CCDC180-203ENST00000472746 IFNL2Q8IZJ0 200 aa18.64■□□□□ 0.57
CCDC180-203ENST00000472746 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
CCDC180-203ENST00000472746 FCHSD2O94868 740 aa18.62■□□□□ 0.57
CCDC180-203ENST00000472746 BAG6P46379 1132 aa18.62■□□□□ 0.57
CCDC180-203ENST00000472746 ZNF530Q6P9A1 599 aaPredicted RBP18.62■□□□□ 0.57
CCDC180-203ENST00000472746 BCL11BQ9C0K0 894 aaPredicted RBP18.62■□□□□ 0.57
CCDC180-203ENST00000472746 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
CCDC180-203ENST00000472746 CYP27B1O15528 508 aa18.61■□□□□ 0.57
CCDC180-203ENST00000472746 APBA3O96018 575 aa18.61■□□□□ 0.57
CCDC180-203ENST00000472746 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
CCDC180-203ENST00000472746 WDR43Q15061 677 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCDC180-203ENST00000472746 ACSBG1Q96GR2 724 aa18.61■□□□□ 0.57
CCDC180-203ENST00000472746 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
CCDC180-203ENST00000472746 PHKG2P15735 406 aa18.6■□□□□ 0.57
CCDC180-203ENST00000472746 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
CCDC180-203ENST00000472746 SYTL4Q96C24 671 aaPredicted RBP18.6■□□□□ 0.57
CCDC180-203ENST00000472746 RSPH6AQ9H0K4 717 aa18.59■□□□□ 0.57
CCDC180-203ENST00000472746 NKX1-1Q15270 411 aaPredicted RBP18.58■□□□□ 0.56
CCDC180-203ENST00000472746 GAS2L2Q8NHY3 880 aa18.58■□□□□ 0.56
CCDC180-203ENST00000472746 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
CCDC180-203ENST00000472746 AKAP4Q5JQC9 854 aa18.57■□□□□ 0.56
CCDC180-203ENST00000472746 KCNQ2O43526 872 aa18.56■□□□□ 0.56
CCDC180-203ENST00000472746 MTHFSDQ2M296 383 aaKnown RBP18.56■□□□□ 0.56
CCDC180-203ENST00000472746 DCAF5Q96JK2 942 aa18.56■□□□□ 0.56
CCDC180-203ENST00000472746 PKD1L3Q7Z443 1732 aa18.55■□□□□ 0.56
CCDC180-203ENST00000472746 MAPK8IP3Q9UPT6 1336 aa18.54■□□□□ 0.56
CCDC180-203ENST00000472746 DEFB132Q7Z7B7 95 aa18.54■□□□□ 0.56
CCDC180-203ENST00000472746 EN1Q05925 392 aaPredicted RBP18.53■□□□□ 0.56
CCDC180-203ENST00000472746 MRS2Q9HD23 443 aa18.53■□□□□ 0.56
CCDC180-203ENST00000472746 PLSCR1O15162 318 aa18.52■□□□□ 0.56
CCDC180-203ENST00000472746 MPRIPQ6WCQ1 1025 aa18.52■□□□□ 0.56
CCDC180-203ENST00000472746 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.56
CCDC180-203ENST00000472746 TMOD3Q9NYL9 352 aa18.52■□□□□ 0.56
CCDC180-203ENST00000472746 GNAT3A8MTJ3 354 aa18.51■□□□□ 0.55
CCDC180-203ENST00000472746 ERVV-2B6SEH9 535 aa18.51■□□□□ 0.55
CCDC180-203ENST00000472746 CABP4P57796 275 aa18.51■□□□□ 0.55
CCDC180-203ENST00000472746 DIEXFQ68CQ4 756 aaKnown RBP18.51■□□□□ 0.55
CCDC180-203ENST00000472746 PTF1AQ7RTS3 328 aa18.51■□□□□ 0.55
CCDC180-203ENST00000472746 SHANK3Q9BYB0 1731 aa18.51■□□□□ 0.55
CCDC180-203ENST00000472746 RTF1Q92541 710 aaKnown RBP18.5■□□□□ 0.55
CCDC180-203ENST00000472746 EZH2Q15910 746 aaKnown RBP18.49■□□□□ 0.55
CCDC180-203ENST00000472746 CAMKK2Q96RR4 588 aa18.49■□□□□ 0.55
CCDC180-203ENST00000472746 PLEKHF1Q96S99 279 aa18.49■□□□□ 0.55
CCDC180-203ENST00000472746 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
CCDC180-203ENST00000472746 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
CCDC180-203ENST00000472746 NHSQ6T4R5 1651 aa18.48■□□□□ 0.55
CCDC180-203ENST00000472746 RNMTO43148 476 aaKnown RBP18.47■□□□□ 0.55
CCDC180-203ENST00000472746 CCDC184Q52MB2 194 aa18.47■□□□□ 0.55
CCDC180-203ENST00000472746 PIGBQ92521 554 aa18.47■□□□□ 0.55
CCDC180-203ENST00000472746 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
CCDC180-203ENST00000472746 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
CCDC180-203ENST00000472746 KDM6AO15550 1401 aaPredicted RBP18.46■□□□□ 0.55
CCDC180-203ENST00000472746 TNS1Q9HBL0 1735 aaKnown RBP18.46■□□□□ 0.55
CCDC180-203ENST00000472746 HTATSF1O43719 755 aaKnown RBP18.45■□□□□ 0.54
CCDC180-203ENST00000472746 TEFQ10587 303 aa18.45■□□□□ 0.54
CCDC180-203ENST00000472746 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
CCDC180-203ENST00000472746 CCDC146Q8IYE0 955 aa18.45■□□□□ 0.54
CCDC180-203ENST00000472746 LGR6Q9HBX8 967 aa18.45■□□□□ 0.54
CCDC180-203ENST00000472746 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
CCDC180-203ENST00000472746 HMGB2P26583 209 aaKnown RBP18.44■□□□□ 0.54
CCDC180-203ENST00000472746 TXNRD1Q16881 649 aa18.44■□□□□ 0.54
CCDC180-203ENST00000472746 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
CCDC180-203ENST00000472746 SLC52A2Q9HAB3 445 aa18.44■□□□□ 0.54
CCDC180-203ENST00000472746 SLC27A3Q5K4L6 730 aa18.43■□□□□ 0.54
CCDC180-203ENST00000472746 NBPF14Q5TI25 921 aa18.43■□□□□ 0.54
CCDC180-203ENST00000472746 PNISRQ8TF01 805 aaKnown RBP18.43■□□□□ 0.54
CCDC180-203ENST00000472746 SBF2Q86WG5 1849 aa18.43■□□□□ 0.54
CCDC180-203ENST00000472746 LMOD3Q0VAK6 560 aa18.42■□□□□ 0.54
CCDC180-203ENST00000472746 IL17REQ8NFR9 667 aa18.42■□□□□ 0.54
CCDC180-203ENST00000472746 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
CCDC180-203ENST00000472746 RIPK4P57078 832 aa18.41■□□□□ 0.54
CCDC180-203ENST00000472746 CCNL1Q9UK58 526 aaPredicted RBP18.41■□□□□ 0.54
CCDC180-203ENST00000472746 CCER2I3L3R5 266 aa18.4■□□□□ 0.54
CCDC180-203ENST00000472746 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
CCDC180-203ENST00000472746 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
CCDC180-203ENST00000472746 EP400Q96L91 3159 aa18.39■□□□□ 0.53
CCDC180-203ENST00000472746 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
CCDC180-203ENST00000472746 MCM10Q7L590 875 aa18.39■□□□□ 0.53
CCDC180-203ENST00000472746 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms