RNA–Protein interactions for RNA: ENST00000472737.1

SYP-206, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-206ENST00000472737 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.32
SYP-206ENST00000472737 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
SYP-206ENST00000472737 MYBBP1AQ9BQG0 1328 aaKnown RBP17.01■□□□□ 0.31
SYP-206ENST00000472737 HMGB2P26583 209 aaKnown RBP17.01■□□□□ 0.31
SYP-206ENST00000472737 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
SYP-206ENST00000472737 KDRP35968 1356 aa17.01■□□□□ 0.31
SYP-206ENST00000472737 CNGB1Q14028 1251 aaPredicted RBP17■□□□□ 0.31
SYP-206ENST00000472737 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
SYP-206ENST00000472737 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
SYP-206ENST00000472737 PKD1L3Q7Z443 1732 aa16.99■□□□□ 0.31
SYP-206ENST00000472737 MEGF6O75095 1541 aa16.98■□□□□ 0.31
SYP-206ENST00000472737 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
SYP-206ENST00000472737 MARCH10Q8NA82 808 aaPredicted RBP16.98■□□□□ 0.31
SYP-206ENST00000472737 PRKRIP1Q9H875 184 aaPredicted RBP16.98■□□□□ 0.31
SYP-206ENST00000472737 BAG6P46379 1132 aa16.97■□□□□ 0.31
SYP-206ENST00000472737 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
SYP-206ENST00000472737 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
SYP-206ENST00000472737 SBF2Q86WG5 1849 aa16.96■□□□□ 0.31
SYP-206ENST00000472737 ANP32CO43423 234 aa16.96■□□□□ 0.31
SYP-206ENST00000472737 NEFMP07197 916 aa16.96■□□□□ 0.31
SYP-206ENST00000472737 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
SYP-206ENST00000472737 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
SYP-206ENST00000472737 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
SYP-206ENST00000472737 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
SYP-206ENST00000472737 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
SYP-206ENST00000472737 FCHSD2O94868 740 aa16.94■□□□□ 0.3
SYP-206ENST00000472737 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
SYP-206ENST00000472737 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
SYP-206ENST00000472737 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
SYP-206ENST00000472737 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
SYP-206ENST00000472737 PLSCR1O15162 318 aa16.91■□□□□ 0.3
SYP-206ENST00000472737 TRIM37O94972 964 aa16.91■□□□□ 0.3
SYP-206ENST00000472737 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
SYP-206ENST00000472737 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
SYP-206ENST00000472737 GAS2L2Q8NHY3 880 aa16.91■□□□□ 0.3
SYP-206ENST00000472737 RGPD3A6NKT7 1758 aaPredicted RBP16.91■□□□□ 0.3
SYP-206ENST00000472737 RGPD4Q7Z3J3 1758 aa16.91■□□□□ 0.3
SYP-206ENST00000472737 NHSQ6T4R5 1651 aa16.91■□□□□ 0.3
SYP-206ENST00000472737 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
SYP-206ENST00000472737 APBA3O96018 575 aa16.89■□□□□ 0.29
SYP-206ENST00000472737 PHKG2P15735 406 aa16.89■□□□□ 0.29
SYP-206ENST00000472737 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
SYP-206ENST00000472737 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
SYP-206ENST00000472737 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
SYP-206ENST00000472737 ERVV-2B6SEH9 535 aa16.88■□□□□ 0.29
SYP-206ENST00000472737 CYP27B1O15528 508 aa16.88■□□□□ 0.29
SYP-206ENST00000472737 HMOX1P09601 288 aa16.88■□□□□ 0.29
SYP-206ENST00000472737 ZNF530Q6P9A1 599 aaPredicted RBP16.88■□□□□ 0.29
SYP-206ENST00000472737 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
SYP-206ENST00000472737 WDR43Q15061 677 aaKnown RBP eCLIP16.86■□□□□ 0.29
SYP-206ENST00000472737 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
SYP-206ENST00000472737 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
SYP-206ENST00000472737 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
SYP-206ENST00000472737 EP400Q96L91 3159 aa16.84■□□□□ 0.29
SYP-206ENST00000472737 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
SYP-206ENST00000472737 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
SYP-206ENST00000472737 PRIM1P49642 420 aaKnown RBP16.83■□□□□ 0.28
SYP-206ENST00000472737 SYTL4Q96C24 671 aaPredicted RBP16.83■□□□□ 0.28
SYP-206ENST00000472737 ACSBG1Q96GR2 724 aa16.83■□□□□ 0.28
SYP-206ENST00000472737 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
SYP-206ENST00000472737 BTAF1O14981 1849 aa16.82■□□□□ 0.28
SYP-206ENST00000472737 ITGB4P16144 1822 aa16.82■□□□□ 0.28
SYP-206ENST00000472737 SLC27A3Q5K4L6 730 aa16.82■□□□□ 0.28
SYP-206ENST00000472737 CAMKK2Q96RR4 588 aa16.82■□□□□ 0.28
SYP-206ENST00000472737 TMOD3Q9NYL9 352 aa16.82■□□□□ 0.28
SYP-206ENST00000472737 GNAT3A8MTJ3 354 aa16.81■□□□□ 0.28
SYP-206ENST00000472737 MTHFSDQ2M296 383 aaKnown RBP16.81■□□□□ 0.28
SYP-206ENST00000472737 NBPF14Q5TI25 921 aa16.81■□□□□ 0.28
SYP-206ENST00000472737 SCN11AQ9UI33 1791 aa16.81■□□□□ 0.28
SYP-206ENST00000472737 KCNQ2O43526 872 aa16.8■□□□□ 0.28
SYP-206ENST00000472737 CABP4P57796 275 aa16.8■□□□□ 0.28
SYP-206ENST00000472737 EN1Q05925 392 aaPredicted RBP16.8■□□□□ 0.28
SYP-206ENST00000472737 RTF1Q92541 710 aaKnown RBP16.8■□□□□ 0.28
SYP-206ENST00000472737 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
SYP-206ENST00000472737 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
SYP-206ENST00000472737 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
SYP-206ENST00000472737 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
SYP-206ENST00000472737 RREB1Q92766 1687 aa16.78■□□□□ 0.28
SYP-206ENST00000472737 VIRMAQ69YN4 1812 aaKnown RBP16.77■□□□□ 0.28
SYP-206ENST00000472737 PLEKHF1Q96S99 279 aa16.77■□□□□ 0.28
SYP-206ENST00000472737 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.28
SYP-206ENST00000472737 RNMTO43148 476 aaKnown RBP16.76■□□□□ 0.27
SYP-206ENST00000472737 EZH2Q15910 746 aaKnown RBP16.76■□□□□ 0.27
SYP-206ENST00000472737 TXNRD1Q16881 649 aa16.76■□□□□ 0.27
SYP-206ENST00000472737 RUNDC1Q96C34 613 aa16.76■□□□□ 0.27
SYP-206ENST00000472737 LY75O60449 1722 aa16.76■□□□□ 0.27
SYP-206ENST00000472737 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
SYP-206ENST00000472737 TEFQ10587 303 aa16.75■□□□□ 0.27
SYP-206ENST00000472737 NFE2L2Q16236 605 aa16.75■□□□□ 0.27
SYP-206ENST00000472737 PIGBQ92521 554 aa16.75■□□□□ 0.27
SYP-206ENST00000472737 PHACTR3Q96KR7 559 aa16.75■□□□□ 0.27
SYP-206ENST00000472737 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
SYP-206ENST00000472737 MRS2Q9HD23 443 aa16.75■□□□□ 0.27
SYP-206ENST00000472737 KDM6AO15550 1401 aaPredicted RBP16.75■□□□□ 0.27
SYP-206ENST00000472737 MRC1P22897 1456 aa16.73■□□□□ 0.27
SYP-206ENST00000472737 ZNF831Q5JPB2 1677 aa16.73■□□□□ 0.27
SYP-206ENST00000472737 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
SYP-206ENST00000472737 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
SYP-206ENST00000472737 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
SYP-206ENST00000472737 PALLDQ8WX93 1383 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms