RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 PCDH11YQ9BZA8 1340 aa26.49■■□□□ 1.83
COMMD1-208ENST00000472729 PRIM1P49642 420 aaKnown RBP26.49■■□□□ 1.83
COMMD1-208ENST00000472729 SPG7Q9UQ90 795 aa26.48■■□□□ 1.83
COMMD1-208ENST00000472729 MEGF6O75095 1541 aa26.48■■□□□ 1.83
COMMD1-208ENST00000472729 SRCAPQ6ZRS2 3230 aa26.47■■□□□ 1.83
COMMD1-208ENST00000472729 PROM2Q8N271 834 aa26.46■■□□□ 1.83
COMMD1-208ENST00000472729 EYA1Q99502 592 aa26.46■■□□□ 1.83
COMMD1-208ENST00000472729 EIF4A2Q14240 407 aaKnown RBP26.45■■□□□ 1.82
COMMD1-208ENST00000472729 SLC27A3Q5K4L6 730 aa26.41■■□□□ 1.82
COMMD1-208ENST00000472729 SPON1Q9HCB6 807 aa26.41■■□□□ 1.82
COMMD1-208ENST00000472729 AMER1Q5JTC6 1135 aaPredicted RBP26.4■■□□□ 1.82
COMMD1-208ENST00000472729 CC2D1BQ5T0F9 858 aaKnown RBP26.4■■□□□ 1.82
COMMD1-208ENST00000472729 ANO8Q9HCE9 1232 aaPredicted RBP26.4■■□□□ 1.82
COMMD1-208ENST00000472729 PPP1R1BQ9UD71 204 aaPredicted RBP26.4■■□□□ 1.82
COMMD1-208ENST00000472729 CNGB1Q14028 1251 aaPredicted RBP26.39■■□□□ 1.82
COMMD1-208ENST00000472729 SLC15A2Q16348 729 aa26.39■■□□□ 1.82
COMMD1-208ENST00000472729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.39■■□□□ 1.82
COMMD1-208ENST00000472729 SBF2Q86WG5 1849 aa26.37■■□□□ 1.81
COMMD1-208ENST00000472729 HMGB2P26583 209 aaKnown RBP26.37■■□□□ 1.81
COMMD1-208ENST00000472729 RREB1Q92766 1687 aa26.37■■□□□ 1.81
COMMD1-208ENST00000472729 NHSQ6T4R5 1651 aa26.36■■□□□ 1.81
COMMD1-208ENST00000472729 CYP27B1O15528 508 aa26.36■■□□□ 1.81
COMMD1-208ENST00000472729 MPRIPQ6WCQ1 1025 aa26.36■■□□□ 1.81
COMMD1-208ENST00000472729 IFNL2Q8IZJ0 200 aa26.35■■□□□ 1.81
COMMD1-208ENST00000472729 NUP188Q5SRE5 1749 aa26.34■■□□□ 1.81
COMMD1-208ENST00000472729 RGPD3A6NKT7 1758 aaPredicted RBP26.34■■□□□ 1.81
COMMD1-208ENST00000472729 RGPD4Q7Z3J3 1758 aa26.34■■□□□ 1.81
COMMD1-208ENST00000472729 PER1O15534 1290 aaPredicted RBP26.33■■□□□ 1.81
COMMD1-208ENST00000472729 PLEKHO1Q53GL0 409 aaPredicted RBP26.33■■□□□ 1.81
COMMD1-208ENST00000472729 CCNL1Q9UK58 526 aaPredicted RBP26.33■■□□□ 1.81
COMMD1-208ENST00000472729 MTHFSP49914 203 aa26.32■■□□□ 1.8
COMMD1-208ENST00000472729 IGSF1Q8N6C5 1336 aa26.32■■□□□ 1.8
COMMD1-208ENST00000472729 RGPD2P0DJD1 1756 aa26.3■■□□□ 1.8
COMMD1-208ENST00000472729 ZBTB7AO95365 584 aa26.3■■□□□ 1.8
COMMD1-208ENST00000472729 AMOTQ4VCS5 1084 aa26.3■■□□□ 1.8
COMMD1-208ENST00000472729 SMARCC1Q92922 1105 aaPredicted RBP26.3■■□□□ 1.8
COMMD1-208ENST00000472729 LRRC4BQ9NT99 713 aa26.3■■□□□ 1.8
COMMD1-208ENST00000472729 TFCP2L1Q9NZI6 479 aa26.3■■□□□ 1.8
COMMD1-208ENST00000472729 NCAPD2Q15021 1401 aa26.3■■□□□ 1.8
COMMD1-208ENST00000472729 HSP90AB1P08238 724 aaKnown RBP26.29■■□□□ 1.8
COMMD1-208ENST00000472729 NKX1-1Q15270 411 aaPredicted RBP26.29■■□□□ 1.8
COMMD1-208ENST00000472729 LRP5O75197 1615 aa26.28■■□□□ 1.8
COMMD1-208ENST00000472729 ANKRD26Q9UPS8 1709 aa26.28■■□□□ 1.8
COMMD1-208ENST00000472729 PHKG2P15735 406 aa26.28■■□□□ 1.8
COMMD1-208ENST00000472729 SULT6B1Q6IMI4 303 aa26.28■■□□□ 1.8
COMMD1-208ENST00000472729 TMOD3Q9NYL9 352 aa26.28■■□□□ 1.8
COMMD1-208ENST00000472729 MAP2P11137 1827 aaKnown RBP26.28■■□□□ 1.8
COMMD1-208ENST00000472729 C1orf141Q5JVX7 400 aa26.27■■□□□ 1.8
COMMD1-208ENST00000472729 KAT6BQ8WYB5 2073 aa26.26■■□□□ 1.79
COMMD1-208ENST00000472729 PLEKHG2Q9H7P9 1386 aa26.26■■□□□ 1.79
COMMD1-208ENST00000472729 KCNQ4P56696 695 aa26.26■■□□□ 1.79
COMMD1-208ENST00000472729 ATF5Q9Y2D1 282 aaPredicted RBP26.26■■□□□ 1.79
COMMD1-208ENST00000472729 IL13P35225 146 aa26.25■■□□□ 1.79
COMMD1-208ENST00000472729 MTFR1LQ9H019 292 aa26.25■■□□□ 1.79
COMMD1-208ENST00000472729 NPC1L1Q9UHC9 1359 aa26.24■■□□□ 1.79
COMMD1-208ENST00000472729 DIAPH1O60610 1272 aaKnown RBP26.24■■□□□ 1.79
COMMD1-208ENST00000472729 ZNF530Q6P9A1 599 aaPredicted RBP26.24■■□□□ 1.79
COMMD1-208ENST00000472729 PDGFDQ9GZP0 370 aaPredicted RBP26.24■■□□□ 1.79
COMMD1-208ENST00000472729 PALLDQ8WX93 1383 aa26.23■■□□□ 1.79
COMMD1-208ENST00000472729 DCAF8L1A6NGE4 600 aa26.23■■□□□ 1.79
COMMD1-208ENST00000472729 ZNF827Q17R98 1081 aa26.23■■□□□ 1.79
COMMD1-208ENST00000472729 PIGBQ92521 554 aa26.23■■□□□ 1.79
COMMD1-208ENST00000472729 BTAF1O14981 1849 aa26.23■■□□□ 1.79
COMMD1-208ENST00000472729 MSH5O43196 834 aa26.22■■□□□ 1.79
COMMD1-208ENST00000472729 AEBP1Q8IUX7 1158 aa26.22■■□□□ 1.79
COMMD1-208ENST00000472729 AKT1S1Q96B36 256 aa26.22■■□□□ 1.79
COMMD1-208ENST00000472729 DCAF5Q96JK2 942 aa26.22■■□□□ 1.79
COMMD1-208ENST00000472729 CFAP53Q96M91 514 aa26.2■■□□□ 1.78
COMMD1-208ENST00000472729 DOT1LQ8TEK3 1739 aa26.19■■□□□ 1.78
COMMD1-208ENST00000472729 ERVV-2B6SEH9 535 aa26.18■■□□□ 1.78
COMMD1-208ENST00000472729 CABP4P57796 275 aa26.18■■□□□ 1.78
COMMD1-208ENST00000472729 SLC16A10Q8TF71 515 aa26.18■■□□□ 1.78
COMMD1-208ENST00000472729 U2SURPO15042 1029 aaKnown RBP26.17■■□□□ 1.78
COMMD1-208ENST00000472729 HMOX1P09601 288 aa26.16■■□□□ 1.78
COMMD1-208ENST00000472729 SHANK3Q9BYB0 1731 aa26.16■■□□□ 1.78
COMMD1-208ENST00000472729 POLD1P28340 1107 aa26.15■■□□□ 1.78
COMMD1-208ENST00000472729 AK7Q96M32 723 aa26.15■■□□□ 1.78
COMMD1-208ENST00000472729 FLAD1Q8NFF5 587 aa26.14■■□□□ 1.78
COMMD1-208ENST00000472729 ASAP1Q9ULH1 1129 aa26.13■■□□□ 1.77
COMMD1-208ENST00000472729 PKD1L3Q7Z443 1732 aa26.13■■□□□ 1.77
COMMD1-208ENST00000472729 PNPLA7Q6ZV29 1317 aa26.13■■□□□ 1.77
COMMD1-208ENST00000472729 KDRP35968 1356 aa26.12■■□□□ 1.77
COMMD1-208ENST00000472729 LOC102724428A0A0B4J2F2 783 aa26.12■■□□□ 1.77
COMMD1-208ENST00000472729 SIK1P57059 783 aa26.12■■□□□ 1.77
COMMD1-208ENST00000472729 NUDCQ9Y266 331 aa26.12■■□□□ 1.77
COMMD1-208ENST00000472729 ATP6V1AP38606 617 aa26.11■■□□□ 1.77
COMMD1-208ENST00000472729 PTGER2P43116 358 aa26.11■■□□□ 1.77
COMMD1-208ENST00000472729 AKAP4Q5JQC9 854 aa26.11■■□□□ 1.77
COMMD1-208ENST00000472729 ARXQ96QS3 562 aa26.1■■□□□ 1.77
COMMD1-208ENST00000472729 RBM42Q9BTD8 480 aaKnown RBP26.1■■□□□ 1.77
COMMD1-208ENST00000472729 ATG3Q9NT62 314 aa26.1■■□□□ 1.77
COMMD1-208ENST00000472729 PAPPAQ13219 1627 aa26.07■■□□□ 1.76
COMMD1-208ENST00000472729 KLHL34Q8N239 644 aa26.06■■□□□ 1.76
COMMD1-208ENST00000472729 NFATC2IPQ8NCF5 419 aa26.06■■□□□ 1.76
COMMD1-208ENST00000472729 PHF14O94880 888 aa26.05■■□□□ 1.76
COMMD1-208ENST00000472729 COL23A1Q86Y22 540 aaPredicted RBP26.05■■□□□ 1.76
COMMD1-208ENST00000472729 PPP2R1AP30153 589 aa26.04■■□□□ 1.76
COMMD1-208ENST00000472729 FHDC1Q9C0D6 1143 aaPredicted RBP26.04■■□□□ 1.76
COMMD1-208ENST00000472729 CASZ1Q86V15 1759 aa26.04■■□□□ 1.76
COMMD1-208ENST00000472729 MTHFSDQ2M296 383 aaKnown RBP26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms