RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 USP54Q70EL1 1684 aa21.99■■□□□ 1.11
RRP1-202ENST00000471909 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
RRP1-202ENST00000471909 ESCO1Q5FWF5 840 aa21.98■■□□□ 1.11
RRP1-202ENST00000471909 CRB1P82279 1406 aa21.97■■□□□ 1.11
RRP1-202ENST00000471909 KRT24Q2M2I5 525 aa21.97■■□□□ 1.11
RRP1-202ENST00000471909 DNAJC5Q9H3Z4 198 aa21.95■■□□□ 1.1
RRP1-202ENST00000471909 ABCC4O15439 1325 aa21.95■■□□□ 1.1
RRP1-202ENST00000471909 ZBTB7BO15156 539 aaPredicted RBP21.95■■□□□ 1.1
RRP1-202ENST00000471909 PSME1Q06323 249 aa21.95■■□□□ 1.1
RRP1-202ENST00000471909 KIAA0232Q92628 1395 aa21.93■■□□□ 1.1
RRP1-202ENST00000471909 NWD1Q149M9 1564 aa21.93■■□□□ 1.1
RRP1-202ENST00000471909 RTF1Q92541 710 aaKnown RBP21.93■■□□□ 1.1
RRP1-202ENST00000471909 GAS2L2Q8NHY3 880 aa21.92■■□□□ 1.1
RRP1-202ENST00000471909 SMC5Q8IY18 1101 aa21.92■■□□□ 1.1
RRP1-202ENST00000471909 LTV1Q96GA3 475 aaPredicted RBP21.92■■□□□ 1.1
RRP1-202ENST00000471909 MIS18AQ9NYP9 233 aa21.91■■□□□ 1.1
RRP1-202ENST00000471909 ORAI2Q96SN7 254 aa21.91■■□□□ 1.1
RRP1-202ENST00000471909 API5Q9BZZ5 524 aaKnown RBP21.91■■□□□ 1.1
RRP1-202ENST00000471909 RTL1A6NKG5 1358 aa21.9■■□□□ 1.1
RRP1-202ENST00000471909 FRAT2O75474 233 aaPredicted RBP21.9■■□□□ 1.1
RRP1-202ENST00000471909 HAP1P54257 671 aaPredicted RBP21.89■■□□□ 1.1
RRP1-202ENST00000471909 NFAT5O94916 1531 aa21.89■■□□□ 1.09
RRP1-202ENST00000471909 CHMP4BQ9H444 224 aaKnown RBP21.88■■□□□ 1.09
RRP1-202ENST00000471909 SEC24BO95487 1268 aa21.88■■□□□ 1.09
RRP1-202ENST00000471909 IP6K1Q92551 441 aa21.88■■□□□ 1.09
RRP1-202ENST00000471909 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.87■■□□□ 1.09
RRP1-202ENST00000471909 TSPYL4Q9UJ04 414 aa21.87■■□□□ 1.09
RRP1-202ENST00000471909 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
RRP1-202ENST00000471909 HTATSF1O43719 755 aaKnown RBP21.86■■□□□ 1.09
RRP1-202ENST00000471909 PROSER2Q86WR7 435 aaPredicted RBP21.86■■□□□ 1.09
RRP1-202ENST00000471909 C1orf115Q9H7X2 142 aa21.86■■□□□ 1.09
RRP1-202ENST00000471909 XPCQ01831 940 aaPredicted RBP21.86■■□□□ 1.09
RRP1-202ENST00000471909 USP19O94966 1318 aa21.86■■□□□ 1.09
RRP1-202ENST00000471909 USHBP1Q8N6Y0 703 aa21.85■■□□□ 1.09
RRP1-202ENST00000471909 GNAT3A8MTJ3 354 aa21.85■■□□□ 1.09
RRP1-202ENST00000471909 KCNH5Q8NCM2 988 aa21.85■■□□□ 1.09
RRP1-202ENST00000471909 LTN1O94822 1766 aa21.84■■□□□ 1.09
RRP1-202ENST00000471909 RGS12O14924 1447 aa21.84■■□□□ 1.09
RRP1-202ENST00000471909 NUCB1Q02818 461 aa21.83■■□□□ 1.09
RRP1-202ENST00000471909 MSH6P52701 1360 aa21.82■■□□□ 1.08
RRP1-202ENST00000471909 NBPF6Q5VWK0 638 aa21.82■■□□□ 1.08
RRP1-202ENST00000471909 INTS3Q68E01 1043 aaKnown RBP21.82■■□□□ 1.08
RRP1-202ENST00000471909 SIRT2Q8IXJ6 389 aa21.82■■□□□ 1.08
RRP1-202ENST00000471909 IL17REQ8NFR9 667 aa21.82■■□□□ 1.08
RRP1-202ENST00000471909 NBPF4Q96M43 638 aa21.82■■□□□ 1.08
RRP1-202ENST00000471909 MAP3K5Q99683 1374 aa21.81■■□□□ 1.08
RRP1-202ENST00000471909 ZBTB7CA1YPR0 619 aa21.8■■□□□ 1.08
RRP1-202ENST00000471909 SLC4A2P04920 1241 aa21.8■■□□□ 1.08
RRP1-202ENST00000471909 C19orf44Q9H6X5 657 aa21.8■■□□□ 1.08
RRP1-202ENST00000471909 LRRC37A3O60309 1634 aa21.8■■□□□ 1.08
RRP1-202ENST00000471909 PTPRCP08575 1304 aa21.8■■□□□ 1.08
RRP1-202ENST00000471909 GCP02774 474 aa21.8■■□□□ 1.08
RRP1-202ENST00000471909 C1orf167Q5SNV9 1468 aa21.79■■□□□ 1.08
RRP1-202ENST00000471909 CHD1LQ86WJ1 897 aa21.78■■□□□ 1.08
RRP1-202ENST00000471909 GCC1Q96CN9 775 aa21.78■■□□□ 1.08
RRP1-202ENST00000471909 LNPKQ9C0E8 428 aa21.78■■□□□ 1.08
RRP1-202ENST00000471909 PLEKHG5O94827 1062 aa21.77■■□□□ 1.08
RRP1-202ENST00000471909 KRT28Q7Z3Y7 464 aa21.77■■□□□ 1.08
RRP1-202ENST00000471909 ARHGEF25Q86VW2 580 aa21.77■■□□□ 1.08
RRP1-202ENST00000471909 LMOD2Q6P5Q4 547 aa21.77■■□□□ 1.08
RRP1-202ENST00000471909 BECN1Q14457 450 aa21.76■■□□□ 1.07
RRP1-202ENST00000471909 SLIT3O75094 1523 aa21.76■■□□□ 1.07
RRP1-202ENST00000471909 PHRF1Q9P1Y6 1649 aaKnown RBP21.76■■□□□ 1.07
RRP1-202ENST00000471909 G2E3Q7L622 706 aa21.76■■□□□ 1.07
RRP1-202ENST00000471909 LRRC59Q96AG4 307 aaKnown RBP21.76■■□□□ 1.07
RRP1-202ENST00000471909 TAF7Q15545 349 aaPredicted RBP21.75■■□□□ 1.07
RRP1-202ENST00000471909 ANKRD45Q5TZF3 282 aa21.74■■□□□ 1.07
RRP1-202ENST00000471909 BABAM1Q9NWV8 329 aa21.73■■□□□ 1.07
RRP1-202ENST00000471909 TRPM3Q9HCF6 1732 aaPredicted RBP21.73■■□□□ 1.07
RRP1-202ENST00000471909 TMEM94Q12767 1356 aa21.72■■□□□ 1.07
RRP1-202ENST00000471909 CEMIPQ8WUJ3 1361 aa21.72■■□□□ 1.07
RRP1-202ENST00000471909 FAM43AQ8N2R8 423 aa21.71■■□□□ 1.07
RRP1-202ENST00000471909 UPF2Q9HAU5 1272 aaKnown RBP21.71■■□□□ 1.07
RRP1-202ENST00000471909 KIF1AQ12756 1690 aa21.71■■□□□ 1.07
RRP1-202ENST00000471909 TBC1D32Q96NH3 1257 aa21.7■■□□□ 1.06
RRP1-202ENST00000471909 STK31Q9BXU1 1019 aa21.7■■□□□ 1.06
RRP1-202ENST00000471909 ATP10DQ9P241 1426 aa21.7■■□□□ 1.06
RRP1-202ENST00000471909 F6X3S4 739 aa21.7■■□□□ 1.06
RRP1-202ENST00000471909 ATF3P18847 181 aa21.7■■□□□ 1.06
RRP1-202ENST00000471909 MEIS3Q99687 375 aa21.7■■□□□ 1.06
RRP1-202ENST00000471909 MST1RQ04912 1400 aa21.7■■□□□ 1.06
RRP1-202ENST00000471909 CCDC30Q5VVM6 783 aa21.69■■□□□ 1.06
RRP1-202ENST00000471909 LGR6Q9HBX8 967 aa21.69■■□□□ 1.06
RRP1-202ENST00000471909 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
RRP1-202ENST00000471909 ANKRD44Q8N8A2 993 aa21.69■■□□□ 1.06
RRP1-202ENST00000471909 ANKRD24Q8TF21 1146 aa21.69■■□□□ 1.06
RRP1-202ENST00000471909 RGPD2P0DJD1 1756 aa21.69■■□□□ 1.06
RRP1-202ENST00000471909 NECTIN2Q92692 538 aa21.68■■□□□ 1.06
RRP1-202ENST00000471909 NCAPD2Q15021 1401 aa21.68■■□□□ 1.06
RRP1-202ENST00000471909 SOS1Q07889 1333 aaPredicted RBP21.68■■□□□ 1.06
RRP1-202ENST00000471909 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
RRP1-202ENST00000471909 SLC4A10Q6U841 1118 aa21.67■■□□□ 1.06
RRP1-202ENST00000471909 DCTPP1Q9H773 170 aa21.67■■□□□ 1.06
RRP1-202ENST00000471909 STRCP1A6NGW2 1772 aa21.67■■□□□ 1.06
RRP1-202ENST00000471909 RPAP2Q8IXW5 612 aaPredicted RBP21.67■■□□□ 1.06
RRP1-202ENST00000471909 SLKQ9H2G2 1235 aaPredicted RBP21.67■■□□□ 1.06
RRP1-202ENST00000471909 FLIIQ13045 1269 aa21.66■■□□□ 1.06
RRP1-202ENST00000471909 DDX17Q92841 729 aaKnown RBP21.66■■□□□ 1.06
RRP1-202ENST00000471909 CCT4P50991 539 aaKnown RBP21.66■■□□□ 1.06
RRP1-202ENST00000471909 HSPA2P54652 639 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms