RNA–Protein interactions for RNA: ENST00000471563.5

GCOM1-206, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-206ENST00000471563 IP6K1Q92551 441 aa19.36■□□□□ 0.69
GCOM1-206ENST00000471563 TRPM3Q9HCF6 1732 aaPredicted RBP19.35■□□□□ 0.69
GCOM1-206ENST00000471563 CALD1Q05682 793 aaKnown RBP19.35■□□□□ 0.69
GCOM1-206ENST00000471563 CFAP44Q96MT7 982 aa19.35■□□□□ 0.69
GCOM1-206ENST00000471563 BRPF3Q9ULD4 1205 aa19.35■□□□□ 0.69
GCOM1-206ENST00000471563 CADPS2Q86UW7 1296 aa19.35■□□□□ 0.69
GCOM1-206ENST00000471563 DCCP43146 1447 aa19.35■□□□□ 0.69
GCOM1-206ENST00000471563 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
GCOM1-206ENST00000471563 RTL1A6NKG5 1358 aa19.34■□□□□ 0.69
GCOM1-206ENST00000471563 MSH6P52701 1360 aa19.33■□□□□ 0.69
GCOM1-206ENST00000471563 KIF1AQ12756 1690 aa19.33■□□□□ 0.68
GCOM1-206ENST00000471563 ARHGEF25Q86VW2 580 aa19.32■□□□□ 0.68
GCOM1-206ENST00000471563 NBPF6Q5VWK0 638 aa19.32■□□□□ 0.68
GCOM1-206ENST00000471563 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
GCOM1-206ENST00000471563 NBPF4Q96M43 638 aa19.32■□□□□ 0.68
GCOM1-206ENST00000471563 XIRP1Q702N8 1843 aaKnown RBP19.31■□□□□ 0.68
GCOM1-206ENST00000471563 VAMP4O75379 141 aa19.31■□□□□ 0.68
GCOM1-206ENST00000471563 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
GCOM1-206ENST00000471563 LRRC59Q96AG4 307 aaKnown RBP19.31■□□□□ 0.68
GCOM1-206ENST00000471563 NOB1Q9ULX3 412 aaKnown RBP19.31■□□□□ 0.68
GCOM1-206ENST00000471563 USP19O94966 1318 aa19.31■□□□□ 0.68
GCOM1-206ENST00000471563 SLIT3O75094 1523 aa19.3■□□□□ 0.68
GCOM1-206ENST00000471563 FRAT2O75474 233 aaPredicted RBP19.3■□□□□ 0.68
GCOM1-206ENST00000471563 TRIM27P14373 513 aa19.3■□□□□ 0.68
GCOM1-206ENST00000471563 IGHDP01880 384 aa19.3■□□□□ 0.68
GCOM1-206ENST00000471563 KRT24Q2M2I5 525 aa19.3■□□□□ 0.68
GCOM1-206ENST00000471563 MIS18AQ9NYP9 233 aa19.3■□□□□ 0.68
GCOM1-206ENST00000471563 AXIN2Q9Y2T1 843 aa19.3■□□□□ 0.68
GCOM1-206ENST00000471563 ZC3H6P61129 1189 aaKnown RBP19.28■□□□□ 0.68
GCOM1-206ENST00000471563 TWISTNBQ3B726 338 aaPredicted RBP19.28■□□□□ 0.68
GCOM1-206ENST00000471563 CABLES1Q8TDN4 633 aa19.28■□□□□ 0.68
GCOM1-206ENST00000471563 CRB1P82279 1406 aa19.28■□□□□ 0.68
GCOM1-206ENST00000471563 CHL1O00533 1208 aa19.27■□□□□ 0.68
GCOM1-206ENST00000471563 DZIP1LQ8IYY4 767 aaKnown RBP19.27■□□□□ 0.68
GCOM1-206ENST00000471563 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.68
GCOM1-206ENST00000471563 FTSJ3Q8IY81 847 aaKnown RBP19.27■□□□□ 0.68
GCOM1-206ENST00000471563 GAS2L2Q8NHY3 880 aa19.27■□□□□ 0.68
GCOM1-206ENST00000471563 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
GCOM1-206ENST00000471563 ALS2Q96Q42 1657 aa19.27■□□□□ 0.67
GCOM1-206ENST00000471563 NPHP3Q7Z494 1330 aa19.26■□□□□ 0.67
GCOM1-206ENST00000471563 ALDH1L2Q3SY69 923 aa19.26■□□□□ 0.67
GCOM1-206ENST00000471563 ATF7IPQ6VMQ6 1270 aa19.26■□□□□ 0.67
GCOM1-206ENST00000471563 BRINP3Q76B58 766 aa19.26■□□□□ 0.67
GCOM1-206ENST00000471563 RGPD2P0DJD1 1756 aa19.25■□□□□ 0.67
GCOM1-206ENST00000471563 MVPQ14764 893 aaKnown RBP19.25■□□□□ 0.67
GCOM1-206ENST00000471563 ANKRD24Q8TF21 1146 aa19.25■□□□□ 0.67
GCOM1-206ENST00000471563 PHRF1Q9P1Y6 1649 aaKnown RBP19.24■□□□□ 0.67
GCOM1-206ENST00000471563 MRPL50Q8N5N7 158 aaKnown RBP19.23■□□□□ 0.67
GCOM1-206ENST00000471563 GNAT3A8MTJ3 354 aa19.23■□□□□ 0.67
GCOM1-206ENST00000471563 PXDNQ92626 1479 aa19.23■□□□□ 0.67
GCOM1-206ENST00000471563 KIF16BQ96L93 1317 aa19.23■□□□□ 0.67
GCOM1-206ENST00000471563 ZNF428Q96B54 188 aa19.22■□□□□ 0.67
GCOM1-206ENST00000471563 SLAIN2Q9P270 581 aa19.22■□□□□ 0.67
GCOM1-206ENST00000471563 PCDHB15Q9Y5E8 787 aa19.22■□□□□ 0.67
GCOM1-206ENST00000471563 TMEM57Q8N5G2 664 aa19.22■□□□□ 0.67
GCOM1-206ENST00000471563 IL17REQ8NFR9 667 aa19.22■□□□□ 0.67
GCOM1-206ENST00000471563 AAMPQ13685 434 aa19.21■□□□□ 0.67
GCOM1-206ENST00000471563 BECN1Q14457 450 aa19.21■□□□□ 0.67
GCOM1-206ENST00000471563 ITPRIPQ8IWB1 547 aa19.21■□□□□ 0.67
GCOM1-206ENST00000471563 TNS3Q68CZ2 1445 aa19.21■□□□□ 0.67
GCOM1-206ENST00000471563 PRKCSHP14314 528 aaPredicted RBP19.21■□□□□ 0.67
GCOM1-206ENST00000471563 SPATA31A3Q5VYP0 1347 aa19.2■□□□□ 0.66
GCOM1-206ENST00000471563 TSPYL4Q9UJ04 414 aa19.2■□□□□ 0.66
GCOM1-206ENST00000471563 MAP3K5Q99683 1374 aa19.2■□□□□ 0.66
GCOM1-206ENST00000471563 IPO8O15397 1037 aaKnown RBP19.2■□□□□ 0.66
GCOM1-206ENST00000471563 BRPF1P55201 1214 aaPredicted RBP19.2■□□□□ 0.66
GCOM1-206ENST00000471563 SEC24BO95487 1268 aa19.19■□□□□ 0.66
GCOM1-206ENST00000471563 CHRNA2Q15822 529 aa19.18■□□□□ 0.66
GCOM1-206ENST00000471563 RGPD5Q99666 1765 aa19.18■□□□□ 0.66
GCOM1-206ENST00000471563 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
GCOM1-206ENST00000471563 ERBB3P21860 1342 aa19.17■□□□□ 0.66
GCOM1-206ENST00000471563 LGR6Q9HBX8 967 aa19.16■□□□□ 0.66
GCOM1-206ENST00000471563 KIAA0232Q92628 1395 aa19.16■□□□□ 0.66
GCOM1-206ENST00000471563 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
GCOM1-206ENST00000471563 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.14■□□□□ 0.66
GCOM1-206ENST00000471563 LRRC37A3O60309 1634 aa19.14■□□□□ 0.65
GCOM1-206ENST00000471563 NCAPD2Q15021 1401 aa19.14■□□□□ 0.65
GCOM1-206ENST00000471563 ZNF530Q6P9A1 599 aaPredicted RBP19.13■□□□□ 0.65
GCOM1-206ENST00000471563 FAM43AQ8N2R8 423 aa19.13■□□□□ 0.65
GCOM1-206ENST00000471563 ARHGAP45Q92619 1136 aa19.13■□□□□ 0.65
GCOM1-206ENST00000471563 SOS2Q07890 1332 aaPredicted RBP19.12■□□□□ 0.65
GCOM1-206ENST00000471563 NLRP2Q9NX02 1062 aa19.12■□□□□ 0.65
GCOM1-206ENST00000471563 MPRIPQ6WCQ1 1025 aa19.12■□□□□ 0.65
GCOM1-206ENST00000471563 TBC1D32Q96NH3 1257 aa19.12■□□□□ 0.65
GCOM1-206ENST00000471563 ANTXR1Q9H6X2 564 aa19.12■□□□□ 0.65
GCOM1-206ENST00000471563 UPF2Q9HAU5 1272 aaKnown RBP19.12■□□□□ 0.65
GCOM1-206ENST00000471563 TAF7Q15545 349 aaPredicted RBP19.11■□□□□ 0.65
GCOM1-206ENST00000471563 PLEKHO1Q53GL0 409 aaPredicted RBP19.11■□□□□ 0.65
GCOM1-206ENST00000471563 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
GCOM1-206ENST00000471563 CEMIPQ8WUJ3 1361 aa19.11■□□□□ 0.65
GCOM1-206ENST00000471563 CRYBG1Q9Y4K1 1723 aa19.1■□□□□ 0.65
GCOM1-206ENST00000471563 COL18A1P39060 1754 aa19.1■□□□□ 0.65
GCOM1-206ENST00000471563 ABCC4O15439 1325 aa19.1■□□□□ 0.65
GCOM1-206ENST00000471563 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
GCOM1-206ENST00000471563 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
GCOM1-206ENST00000471563 CSB-PGBD3P0DP91 1061 aa19.09■□□□□ 0.65
GCOM1-206ENST00000471563 NECTIN2Q92692 538 aa19.09■□□□□ 0.65
GCOM1-206ENST00000471563 SLKQ9H2G2 1235 aaPredicted RBP19.09■□□□□ 0.65
GCOM1-206ENST00000471563 PDZRN3Q9UPQ7 1066 aa19.09■□□□□ 0.65
GCOM1-206ENST00000471563 CAMTA1Q9Y6Y1 1673 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms