RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 LY75O60449 1722 aa12.2□□□□□ -0.46
CHKB-206ENST00000471515 COL24A1Q17RW2 1714 aa12.2□□□□□ -0.46
CHKB-206ENST00000471515 FLT4P35916 1363 aa12.19□□□□□ -0.46
CHKB-206ENST00000471515 AMPHP49418 695 aa12.19□□□□□ -0.46
CHKB-206ENST00000471515 CDCA8Q53HL2 280 aa12.19□□□□□ -0.46
CHKB-206ENST00000471515 HSP90AB2PQ58FF8 381 aa12.19□□□□□ -0.46
CHKB-206ENST00000471515 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
CHKB-206ENST00000471515 QSER1Q2KHR3 1735 aa12.19□□□□□ -0.46
CHKB-206ENST00000471515 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
CHKB-206ENST00000471515 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 TUBGCP6Q96RT7 1819 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 ZCRB1Q8TBF4 217 aaKnown RBP12.17□□□□□ -0.46
CHKB-206ENST00000471515 DDX54Q8TDD1 881 aaKnown RBP12.17□□□□□ -0.46
CHKB-206ENST00000471515 STK32BQ9NY57 414 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
CHKB-206ENST00000471515 PRIM1P49642 420 aaKnown RBP12.16□□□□□ -0.46
CHKB-206ENST00000471515 UTRNP46939 3433 aa12.16□□□□□ -0.46
CHKB-206ENST00000471515 SLC27A3Q5K4L6 730 aa12.15□□□□□ -0.46
CHKB-206ENST00000471515 MTFR1LQ9H019 292 aa12.15□□□□□ -0.46
CHKB-206ENST00000471515 MAP3K5Q99683 1374 aa12.15□□□□□ -0.46
CHKB-206ENST00000471515 WASHC2AQ641Q2 1341 aa12.14□□□□□ -0.47
CHKB-206ENST00000471515 SMG6Q86US8 1419 aaKnown RBP12.14□□□□□ -0.47
CHKB-206ENST00000471515 CYP27B1O15528 508 aa12.14□□□□□ -0.47
CHKB-206ENST00000471515 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
CHKB-206ENST00000471515 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
CHKB-206ENST00000471515 KCNQ4P56696 695 aa12.13□□□□□ -0.47
CHKB-206ENST00000471515 POLKQ9UBT6 870 aa12.13□□□□□ -0.47
CHKB-206ENST00000471515 HSPA5P11021 654 aaKnown RBP12.12□□□□□ -0.47
CHKB-206ENST00000471515 PCDH11XQ9BZA7 1347 aa12.11□□□□□ -0.47
CHKB-206ENST00000471515 PCDH11YQ9BZA8 1340 aa12.11□□□□□ -0.47
CHKB-206ENST00000471515 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
CHKB-206ENST00000471515 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
CHKB-206ENST00000471515 FHDC1Q9C0D6 1143 aaPredicted RBP12.11□□□□□ -0.47
CHKB-206ENST00000471515 PPP1R1BQ9UD71 204 aaPredicted RBP12.11□□□□□ -0.47
CHKB-206ENST00000471515 MAP2P11137 1827 aaKnown RBP12.11□□□□□ -0.47
CHKB-206ENST00000471515 PLEKHG2Q9H7P9 1386 aa12.1□□□□□ -0.47
CHKB-206ENST00000471515 TATP17735 454 aaPredicted RBP12.1□□□□□ -0.47
CHKB-206ENST00000471515 YY1P25490 414 aa12.1□□□□□ -0.47
CHKB-206ENST00000471515 EYA1Q99502 592 aa12.1□□□□□ -0.47
CHKB-206ENST00000471515 SYT17Q9BSW7 474 aa12.1□□□□□ -0.47
CHKB-206ENST00000471515 KAT6BQ8WYB5 2073 aa12.1□□□□□ -0.47
CHKB-206ENST00000471515 ITGB4P16144 1822 aa12.09□□□□□ -0.47
CHKB-206ENST00000471515 EIF4G2P78344 907 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHKB-206ENST00000471515 C5P01031 1676 aa12.09□□□□□ -0.47
CHKB-206ENST00000471515 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
CHKB-206ENST00000471515 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.47
CHKB-206ENST00000471515 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
CHKB-206ENST00000471515 SYTL4Q96C24 671 aaPredicted RBP12.08□□□□□ -0.48
CHKB-206ENST00000471515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.483e-8■□□□□ 11.2
CHKB-206ENST00000471515 IGSF1Q8N6C5 1336 aa12.08□□□□□ -0.48
CHKB-206ENST00000471515 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
CHKB-206ENST00000471515 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
CHKB-206ENST00000471515 AMIGO3Q86WK7 504 aa12.07□□□□□ -0.48
CHKB-206ENST00000471515 ARXQ96QS3 562 aa12.07□□□□□ -0.48
CHKB-206ENST00000471515 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
CHKB-206ENST00000471515 PIGBQ92521 554 aa12.06□□□□□ -0.48
CHKB-206ENST00000471515 PANK3Q9H999 370 aa12.06□□□□□ -0.48
CHKB-206ENST00000471515 COL23A1Q86Y22 540 aaPredicted RBP12.05□□□□□ -0.48
CHKB-206ENST00000471515 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
CHKB-206ENST00000471515 C4BP0C0L5 1744 aa12.05□□□□□ -0.48
CHKB-206ENST00000471515 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
CHKB-206ENST00000471515 KDRP35968 1356 aa12.04□□□□□ -0.48
CHKB-206ENST00000471515 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
CHKB-206ENST00000471515 PHKG2P15735 406 aa12.03□□□□□ -0.48
CHKB-206ENST00000471515 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
CHKB-206ENST00000471515 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
CHKB-206ENST00000471515 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
CHKB-206ENST00000471515 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.49
CHKB-206ENST00000471515 SPG7Q9UQ90 795 aa12.02□□□□□ -0.49
CHKB-206ENST00000471515 ZNF831Q5JPB2 1677 aa12.02□□□□□ -0.49
CHKB-206ENST00000471515 KIF7Q2M1P5 1343 aa12.02□□□□□ -0.49
CHKB-206ENST00000471515 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
CHKB-206ENST00000471515 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
CHKB-206ENST00000471515 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
CHKB-206ENST00000471515 SIK1P57059 783 aa12□□□□□ -0.49
CHKB-206ENST00000471515 ITPK1Q13572 414 aa12□□□□□ -0.49
CHKB-206ENST00000471515 LINC00116Q8NCU8 138 aa12□□□□□ -0.49
CHKB-206ENST00000471515 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
CHKB-206ENST00000471515 SMARCC1Q92922 1105 aaPredicted RBP12□□□□□ -0.49
CHKB-206ENST00000471515 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
CHKB-206ENST00000471515 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
CHKB-206ENST00000471515 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
CHKB-206ENST00000471515 IFNL2Q8IZJ0 200 aa11.99□□□□□ -0.49
CHKB-206ENST00000471515 POLR3GLQ9BT43 218 aa11.99□□□□□ -0.49
CHKB-206ENST00000471515 ATG3Q9NT62 314 aa11.99□□□□□ -0.49
CHKB-206ENST00000471515 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
CHKB-206ENST00000471515 POLD1P28340 1107 aa11.98□□□□□ -0.49
CHKB-206ENST00000471515 IL13P35225 146 aa11.98□□□□□ -0.49
CHKB-206ENST00000471515 CHD4Q14839 1912 aa11.98□□□□□ -0.49
CHKB-206ENST00000471515 COL5A3P25940 1745 aaPredicted RBP11.97□□□□□ -0.49
CHKB-206ENST00000471515 MSL1Q68DK7 614 aa11.97□□□□□ -0.49
CHKB-206ENST00000471515 ZNF784Q8NCA9 323 aaPredicted RBP11.97□□□□□ -0.49
CHKB-206ENST00000471515 TMOD3Q9NYL9 352 aa11.97□□□□□ -0.49
CHKB-206ENST00000471515 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.96□□□□□ -0.49
CHKB-206ENST00000471515 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.49
CHKB-206ENST00000471515 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms