RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 SHANK3Q9BYB0 1731 aa13.65□□□□□ -0.22
RPRD1B-204ENST00000471511 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
RPRD1B-204ENST00000471511 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
RPRD1B-204ENST00000471511 BTAF1O14981 1849 aa13.64□□□□□ -0.23
RPRD1B-204ENST00000471511 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
RPRD1B-204ENST00000471511 ZCRB1Q8TBF4 217 aaKnown RBP13.64□□□□□ -0.23
RPRD1B-204ENST00000471511 STK32BQ9NY57 414 aa13.64□□□□□ -0.23
RPRD1B-204ENST00000471511 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
RPRD1B-204ENST00000471511 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
RPRD1B-204ENST00000471511 INSRP06213 1382 aa13.63□□□□□ -0.23
RPRD1B-204ENST00000471511 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
RPRD1B-204ENST00000471511 CYP27B1O15528 508 aa13.61□□□□□ -0.23
RPRD1B-204ENST00000471511 CDCA8Q53HL2 280 aa13.61□□□□□ -0.23
RPRD1B-204ENST00000471511 POLR3GLQ9BT43 218 aa13.61□□□□□ -0.23
RPRD1B-204ENST00000471511 KIF20BQ96Q89 1820 aa13.6□□□□□ -0.23
RPRD1B-204ENST00000471511 SYTL4Q96C24 671 aaPredicted RBP13.6□□□□□ -0.23
RPRD1B-204ENST00000471511 POLKQ9UBT6 870 aa13.6□□□□□ -0.23
RPRD1B-204ENST00000471511 FLT4P35916 1363 aa13.59□□□□□ -0.23
RPRD1B-204ENST00000471511 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
RPRD1B-204ENST00000471511 DOT1LQ8TEK3 1739 aa13.59□□□□□ -0.23
RPRD1B-204ENST00000471511 EYA1Q99502 592 aa13.58□□□□□ -0.24
RPRD1B-204ENST00000471511 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
RPRD1B-204ENST00000471511 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
RPRD1B-204ENST00000471511 NCAPD2Q15021 1401 aa13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 TATP17735 454 aaPredicted RBP13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 TNNT2P45379 298 aaPredicted RBP13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 FHDC1Q9C0D6 1143 aaPredicted RBP13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 MTFR1LQ9H019 292 aa13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 PANK3Q9H999 370 aa13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 WASHC2AQ641Q2 1341 aa13.57□□□□□ -0.24
RPRD1B-204ENST00000471511 EIF4G2P78344 907 aaKnown RBP eCLIP13.56□□□□□ -0.24
RPRD1B-204ENST00000471511 RAPGEF4Q8WZA2 1011 aa13.56□□□□□ -0.24
RPRD1B-204ENST00000471511 SYT17Q9BSW7 474 aa13.56□□□□□ -0.24
RPRD1B-204ENST00000471511 KIF24Q5T7B8 1368 aa13.56□□□□□ -0.24
RPRD1B-204ENST00000471511 SLC27A3Q5K4L6 730 aa13.55□□□□□ -0.24
RPRD1B-204ENST00000471511 SMIM5Q71RC9 77 aa13.55□□□□□ -0.24
RPRD1B-204ENST00000471511 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
RPRD1B-204ENST00000471511 LY75O60449 1722 aa13.54□□□□□ -0.24
RPRD1B-204ENST00000471511 EIF4A2Q14240 407 aaKnown RBP13.54□□□□□ -0.24
RPRD1B-204ENST00000471511 CGNL1Q0VF96 1302 aa13.54□□□□□ -0.24
RPRD1B-204ENST00000471511 TOGARAM1Q9Y4F4 1720 aa13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 MPRIPQ6WCQ1 1025 aa13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 COL23A1Q86Y22 540 aaPredicted RBP13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 CCNL1Q9UK58 526 aaPredicted RBP13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 UTRNP46939 3433 aa13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 ANKRD26Q9UPS8 1709 aa13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
RPRD1B-204ENST00000471511 NKX1-1Q15270 411 aaPredicted RBP13.52□□□□□ -0.25
RPRD1B-204ENST00000471511 PIGBQ92521 554 aa13.52□□□□□ -0.25
RPRD1B-204ENST00000471511 ARXQ96QS3 562 aa13.52□□□□□ -0.25
RPRD1B-204ENST00000471511 MAP2P11137 1827 aaKnown RBP13.52□□□□□ -0.25
RPRD1B-204ENST00000471511 PCDH11XQ9BZA7 1347 aa13.51□□□□□ -0.25
RPRD1B-204ENST00000471511 PCDH11YQ9BZA8 1340 aa13.51□□□□□ -0.25
RPRD1B-204ENST00000471511 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
RPRD1B-204ENST00000471511 YY1P25490 414 aa13.5□□□□□ -0.25
RPRD1B-204ENST00000471511 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
RPRD1B-204ENST00000471511 PALLDQ8WX93 1383 aa13.49□□□□□ -0.25
RPRD1B-204ENST00000471511 COL24A1Q17RW2 1714 aa13.48□□□□□ -0.25
RPRD1B-204ENST00000471511 PHKG2P15735 406 aa13.48□□□□□ -0.25
RPRD1B-204ENST00000471511 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
RPRD1B-204ENST00000471511 NLGN2Q8NFZ4 835 aa13.48□□□□□ -0.25
RPRD1B-204ENST00000471511 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
RPRD1B-204ENST00000471511 KIF7Q2M1P5 1343 aa13.47□□□□□ -0.25
RPRD1B-204ENST00000471511 IGSF1Q8N6C5 1336 aa13.47□□□□□ -0.25
RPRD1B-204ENST00000471511 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
RPRD1B-204ENST00000471511 MSL1Q68DK7 614 aa13.47□□□□□ -0.25
RPRD1B-204ENST00000471511 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
RPRD1B-204ENST00000471511 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
RPRD1B-204ENST00000471511 ITGB4P16144 1822 aa13.46□□□□□ -0.25
RPRD1B-204ENST00000471511 ITPK1Q13572 414 aa13.46□□□□□ -0.25
RPRD1B-204ENST00000471511 LINC00116Q8NCU8 138 aa13.46□□□□□ -0.25
RPRD1B-204ENST00000471511 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
RPRD1B-204ENST00000471511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.25
RPRD1B-204ENST00000471511 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
RPRD1B-204ENST00000471511 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
RPRD1B-204ENST00000471511 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
RPRD1B-204ENST00000471511 ATG3Q9NT62 314 aa13.45□□□□□ -0.26
RPRD1B-204ENST00000471511 MORC1Q86VD1 984 aa13.44□□□□□ -0.26
RPRD1B-204ENST00000471511 IFNL2Q8IZJ0 200 aa13.44□□□□□ -0.26
RPRD1B-204ENST00000471511 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
RPRD1B-204ENST00000471511 IL13P35225 146 aa13.43□□□□□ -0.26
RPRD1B-204ENST00000471511 SIK1P57059 783 aa13.43□□□□□ -0.26
RPRD1B-204ENST00000471511 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
RPRD1B-204ENST00000471511 C5P01031 1676 aa13.43□□□□□ -0.26
RPRD1B-204ENST00000471511 KDM6AO15550 1401 aaPredicted RBP13.42□□□□□ -0.26
RPRD1B-204ENST00000471511 TAF1LQ8IZX4 1826 aa13.42□□□□□ -0.26
RPRD1B-204ENST00000471511 POLD1P28340 1107 aa13.41□□□□□ -0.26
RPRD1B-204ENST00000471511 SMARCC1Q92922 1105 aaPredicted RBP13.41□□□□□ -0.26
RPRD1B-204ENST00000471511 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
RPRD1B-204ENST00000471511 C4BP0C0L5 1744 aa13.41□□□□□ -0.26
RPRD1B-204ENST00000471511 PHF14O94880 888 aa13.4□□□□□ -0.26
RPRD1B-204ENST00000471511 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
RPRD1B-204ENST00000471511 SULT6B1Q6IMI4 303 aa13.4□□□□□ -0.26
RPRD1B-204ENST00000471511 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
RPRD1B-204ENST00000471511 KNSTRNQ9Y448 316 aa13.4□□□□□ -0.26
RPRD1B-204ENST00000471511 GOLGB1Q14789 3259 aaKnown RBP13.4□□□□□ -0.26
RPRD1B-204ENST00000471511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms