RNA–Protein interactions for RNA: ENST00000471046.1

LAMP1-202, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 3

Gene LAMP1, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-202ENST00000471046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
LAMP1-202ENST00000471046 GRIN3BO60391 1043 aa18.41■□□□□ 0.54
LAMP1-202ENST00000471046 MEGF6O75095 1541 aa18.39■□□□□ 0.54
LAMP1-202ENST00000471046 DDX54Q8TDD1 881 aaKnown RBP18.39■□□□□ 0.53
LAMP1-202ENST00000471046 C4BP0C0L5 1744 aa18.38■□□□□ 0.53
LAMP1-202ENST00000471046 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
LAMP1-202ENST00000471046 HSPA6P17066 643 aa18.37■□□□□ 0.53
LAMP1-202ENST00000471046 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
LAMP1-202ENST00000471046 MSL1Q68DK7 614 aa18.37■□□□□ 0.53
LAMP1-202ENST00000471046 COL23A1Q86Y22 540 aaPredicted RBP18.37■□□□□ 0.53
LAMP1-202ENST00000471046 ROCK2O75116 1388 aaKnown RBP18.37■□□□□ 0.53
LAMP1-202ENST00000471046 CICQ96RK0 1608 aaPredicted RBP18.37■□□□□ 0.53
LAMP1-202ENST00000471046 KIAA1551Q9HCM1 1747 aa18.37■□□□□ 0.53
LAMP1-202ENST00000471046 L3MBTL2Q969R5 705 aa18.36■□□□□ 0.53
LAMP1-202ENST00000471046 SYTL4Q96C24 671 aaPredicted RBP18.36■□□□□ 0.53
LAMP1-202ENST00000471046 KIF13BQ9NQT8 1826 aa18.35■□□□□ 0.53
LAMP1-202ENST00000471046 GPBP1L1Q9HC44 474 aaPredicted RBP18.35■□□□□ 0.53
LAMP1-202ENST00000471046 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
LAMP1-202ENST00000471046 MAP2P11137 1827 aaKnown RBP18.34■□□□□ 0.53
LAMP1-202ENST00000471046 WDR90Q96KV7 1748 aa18.33■□□□□ 0.52
LAMP1-202ENST00000471046 MSH5O43196 834 aa18.33■□□□□ 0.52
LAMP1-202ENST00000471046 IP6K1Q92551 441 aa18.33■□□□□ 0.52
LAMP1-202ENST00000471046 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
LAMP1-202ENST00000471046 A0A1W2PP64 1363 aa18.32■□□□□ 0.52
LAMP1-202ENST00000471046 ZNF526Q8TF50 670 aaPredicted RBP18.32■□□□□ 0.52
LAMP1-202ENST00000471046 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
LAMP1-202ENST00000471046 BRCA1P38398 1863 aaKnown RBP18.31■□□□□ 0.52
LAMP1-202ENST00000471046 PKD1L3Q7Z443 1732 aa18.31■□□□□ 0.52
LAMP1-202ENST00000471046 USP47Q96K76 1375 aa18.3■□□□□ 0.52
LAMP1-202ENST00000471046 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
LAMP1-202ENST00000471046 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
LAMP1-202ENST00000471046 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.52
LAMP1-202ENST00000471046 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
LAMP1-202ENST00000471046 SLC12A5Q9H2X9 1139 aa18.27■□□□□ 0.52
LAMP1-202ENST00000471046 MAP3K19Q56UN5 1328 aa18.26■□□□□ 0.51
LAMP1-202ENST00000471046 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
LAMP1-202ENST00000471046 KIF3CO14782 793 aa18.26■□□□□ 0.51
LAMP1-202ENST00000471046 HOXC9P31274 260 aa18.26■□□□□ 0.51
LAMP1-202ENST00000471046 TMC1Q8TDI8 760 aa18.26■□□□□ 0.51
LAMP1-202ENST00000471046 AMIGO3Q86WK7 504 aa18.24■□□□□ 0.51
LAMP1-202ENST00000471046 WWC3Q9ULE0 1092 aa18.24■□□□□ 0.51
LAMP1-202ENST00000471046 ARFGEF1Q9Y6D6 1849 aa18.23■□□□□ 0.51
LAMP1-202ENST00000471046 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
LAMP1-202ENST00000471046 FBLN1P23142 703 aa18.23■□□□□ 0.51
LAMP1-202ENST00000471046 RTL1A6NKG5 1358 aa18.22■□□□□ 0.51
LAMP1-202ENST00000471046 SIN3AQ96ST3 1273 aa18.22■□□□□ 0.51
LAMP1-202ENST00000471046 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
LAMP1-202ENST00000471046 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
LAMP1-202ENST00000471046 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
LAMP1-202ENST00000471046 AMPHP49418 695 aa18.19■□□□□ 0.5
LAMP1-202ENST00000471046 NBPF6Q5VWK0 638 aa18.19■□□□□ 0.5
LAMP1-202ENST00000471046 SMIM5Q71RC9 77 aa18.19■□□□□ 0.5
LAMP1-202ENST00000471046 NBPF4Q96M43 638 aa18.19■□□□□ 0.5
LAMP1-202ENST00000471046 PCNTO95613 3336 aa18.18■□□□□ 0.5
LAMP1-202ENST00000471046 C4AP0C0L4 1744 aa18.18■□□□□ 0.5
LAMP1-202ENST00000471046 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
LAMP1-202ENST00000471046 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
LAMP1-202ENST00000471046 PXDNLA1KZ92 1463 aa18.18■□□□□ 0.5
LAMP1-202ENST00000471046 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
LAMP1-202ENST00000471046 APLP1P51693 650 aa18.17■□□□□ 0.5
LAMP1-202ENST00000471046 DNAJC5GQ8N7S2 189 aa18.17■□□□□ 0.5
LAMP1-202ENST00000471046 COG3Q96JB2 828 aa18.17■□□□□ 0.5
LAMP1-202ENST00000471046 SBF1O95248 1867 aa18.17■□□□□ 0.5
LAMP1-202ENST00000471046 CGNL1Q0VF96 1302 aa18.17■□□□□ 0.5
LAMP1-202ENST00000471046 AK7Q96M32 723 aa18.16■□□□□ 0.5
LAMP1-202ENST00000471046 PCDH11XQ9BZA7 1347 aa18.16■□□□□ 0.5
LAMP1-202ENST00000471046 PCDH11YQ9BZA8 1340 aa18.16■□□□□ 0.5
LAMP1-202ENST00000471046 PHF14O94880 888 aa18.15■□□□□ 0.5
LAMP1-202ENST00000471046 SMG6Q86US8 1419 aaKnown RBP18.15■□□□□ 0.5
LAMP1-202ENST00000471046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.14■□□□□ 0.49
LAMP1-202ENST00000471046 RRS1Q15050 365 aaKnown RBP18.14■□□□□ 0.49
LAMP1-202ENST00000471046 ZNF831Q5JPB2 1677 aa18.14■□□□□ 0.49
LAMP1-202ENST00000471046 TNRC6CQ9HCJ0 1690 aaKnown RBP18.14■□□□□ 0.49
LAMP1-202ENST00000471046 TATP17735 454 aaPredicted RBP18.13■□□□□ 0.49
LAMP1-202ENST00000471046 MPRIPQ6WCQ1 1025 aa18.13■□□□□ 0.49
LAMP1-202ENST00000471046 RAPGEF4Q8WZA2 1011 aa18.13■□□□□ 0.49
LAMP1-202ENST00000471046 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
LAMP1-202ENST00000471046 CYP27B1O15528 508 aa18.12■□□□□ 0.49
LAMP1-202ENST00000471046 NEUROD1Q13562 356 aa18.12■□□□□ 0.49
LAMP1-202ENST00000471046 PUS7Q96PZ0 661 aaKnown RBP18.12■□□□□ 0.49
LAMP1-202ENST00000471046 TOMM70O94826 608 aa18.11■□□□□ 0.49
LAMP1-202ENST00000471046 SSFA2P28290 1259 aa18.11■□□□□ 0.49
LAMP1-202ENST00000471046 LINC00116Q8NCU8 138 aa18.11■□□□□ 0.49
LAMP1-202ENST00000471046 NCAPD2Q15021 1401 aa18.11■□□□□ 0.49
LAMP1-202ENST00000471046 C10orf71Q711Q0 1435 aa18.11■□□□□ 0.49
LAMP1-202ENST00000471046 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
LAMP1-202ENST00000471046 INSRP06213 1382 aa18.09■□□□□ 0.49
LAMP1-202ENST00000471046 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
LAMP1-202ENST00000471046 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
LAMP1-202ENST00000471046 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
LAMP1-202ENST00000471046 PIGBQ92521 554 aa18.08■□□□□ 0.48
LAMP1-202ENST00000471046 CCDC88AQ3V6T2 1871 aa18.07■□□□□ 0.48
LAMP1-202ENST00000471046 FLT4P35916 1363 aa18.06■□□□□ 0.48
LAMP1-202ENST00000471046 HTRA3P83110 453 aa18.06■□□□□ 0.48
LAMP1-202ENST00000471046 ITPK1Q13572 414 aa18.06■□□□□ 0.48
LAMP1-202ENST00000471046 HSP90AB2PQ58FF8 381 aa18.06■□□□□ 0.48
LAMP1-202ENST00000471046 COL13A1Q5TAT6 717 aaPredicted RBP18.06■□□□□ 0.48
LAMP1-202ENST00000471046 TESK2Q96S53 571 aa18.06■□□□□ 0.48
LAMP1-202ENST00000471046 LOC102724428A0A0B4J2F2 783 aa18.05■□□□□ 0.48
LAMP1-202ENST00000471046 MMP10P09238 476 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 257.1 ms