RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 ITGB4P16144 1822 aa16.8■□□□□ 0.28
SCNM1-205ENST00000471039 EYA1Q99502 592 aa16.79■□□□□ 0.28
SCNM1-205ENST00000471039 PLEKHG2Q9H7P9 1386 aa16.78■□□□□ 0.28
SCNM1-205ENST00000471039 KDRP35968 1356 aa16.77■□□□□ 0.28
SCNM1-205ENST00000471039 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
SCNM1-205ENST00000471039 PPP2R1AP30153 589 aa16.77■□□□□ 0.28
SCNM1-205ENST00000471039 MARCH10Q8NA82 808 aaPredicted RBP16.77■□□□□ 0.28
SCNM1-205ENST00000471039 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.28
SCNM1-205ENST00000471039 EXOC5O00471 708 aa16.76■□□□□ 0.27
SCNM1-205ENST00000471039 IL13P35225 146 aa16.76■□□□□ 0.27
SCNM1-205ENST00000471039 FAM196AQ6ZSG2 479 aa16.76■□□□□ 0.27
SCNM1-205ENST00000471039 TATP17735 454 aaPredicted RBP16.75■□□□□ 0.27
SCNM1-205ENST00000471039 SCN11AQ9UI33 1791 aa16.74■□□□□ 0.27
SCNM1-205ENST00000471039 KAT6BQ8WYB5 2073 aa16.74■□□□□ 0.27
SCNM1-205ENST00000471039 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
SCNM1-205ENST00000471039 LY75O60449 1722 aa16.73■□□□□ 0.27
SCNM1-205ENST00000471039 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
SCNM1-205ENST00000471039 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
SCNM1-205ENST00000471039 CCDC125Q86Z20 511 aa16.72■□□□□ 0.27
SCNM1-205ENST00000471039 AEBP1Q8IUX7 1158 aa16.72■□□□□ 0.27
SCNM1-205ENST00000471039 ZCRB1Q8TBF4 217 aaKnown RBP16.72■□□□□ 0.27
SCNM1-205ENST00000471039 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
SCNM1-205ENST00000471039 RALBP1Q15311 655 aa16.71■□□□□ 0.27
SCNM1-205ENST00000471039 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
SCNM1-205ENST00000471039 TRIM37O94972 964 aa16.7■□□□□ 0.26
SCNM1-205ENST00000471039 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
SCNM1-205ENST00000471039 SF3B2Q13435 895 aaKnown RBP16.69■□□□□ 0.26
SCNM1-205ENST00000471039 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
SCNM1-205ENST00000471039 DDX54Q8TDD1 881 aaKnown RBP16.69■□□□□ 0.26
SCNM1-205ENST00000471039 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
SCNM1-205ENST00000471039 CYP27B1O15528 508 aa16.67■□□□□ 0.26
SCNM1-205ENST00000471039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
SCNM1-205ENST00000471039 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
SCNM1-205ENST00000471039 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
SCNM1-205ENST00000471039 HMOX1P09601 288 aa16.66■□□□□ 0.26
SCNM1-205ENST00000471039 BAG6P46379 1132 aa16.66■□□□□ 0.26
SCNM1-205ENST00000471039 DEFB132Q7Z7B7 95 aa16.66■□□□□ 0.26
SCNM1-205ENST00000471039 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
SCNM1-205ENST00000471039 PAPPAQ13219 1627 aa16.66■□□□□ 0.26
SCNM1-205ENST00000471039 U2SURPO15042 1029 aaKnown RBP16.65■□□□□ 0.26
SCNM1-205ENST00000471039 PTF1AQ7RTS3 328 aa16.65■□□□□ 0.26
SCNM1-205ENST00000471039 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
SCNM1-205ENST00000471039 TAF1LQ8IZX4 1826 aa16.65■□□□□ 0.26
SCNM1-205ENST00000471039 KDM6AO15550 1401 aaPredicted RBP16.64■□□□□ 0.25
SCNM1-205ENST00000471039 BCL11BQ9C0K0 894 aaPredicted RBP16.64■□□□□ 0.25
SCNM1-205ENST00000471039 MRC1P22897 1456 aa16.64■□□□□ 0.25
SCNM1-205ENST00000471039 C5P01031 1676 aa16.63■□□□□ 0.25
SCNM1-205ENST00000471039 KCNQ2O43526 872 aa16.63■□□□□ 0.25
SCNM1-205ENST00000471039 PHKG2P15735 406 aa16.63■□□□□ 0.25
SCNM1-205ENST00000471039 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
SCNM1-205ENST00000471039 APBA3O96018 575 aa16.62■□□□□ 0.25
SCNM1-205ENST00000471039 AMOTQ4VCS5 1084 aa16.62■□□□□ 0.25
SCNM1-205ENST00000471039 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
SCNM1-205ENST00000471039 EN1Q05925 392 aaPredicted RBP16.61■□□□□ 0.25
SCNM1-205ENST00000471039 PLEKHO1Q53GL0 409 aaPredicted RBP16.61■□□□□ 0.25
SCNM1-205ENST00000471039 ZNF530Q6P9A1 599 aaPredicted RBP16.61■□□□□ 0.25
SCNM1-205ENST00000471039 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
SCNM1-205ENST00000471039 RSPH6AQ9H0K4 717 aa16.61■□□□□ 0.25
SCNM1-205ENST00000471039 QSER1Q2KHR3 1735 aa16.6■□□□□ 0.25
SCNM1-205ENST00000471039 NKX1-1Q15270 411 aaPredicted RBP16.6■□□□□ 0.25
SCNM1-205ENST00000471039 CICQ96RK0 1608 aaPredicted RBP16.59■□□□□ 0.25
SCNM1-205ENST00000471039 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
SCNM1-205ENST00000471039 UBR2Q8IWV8 1755 aa16.59■□□□□ 0.25
SCNM1-205ENST00000471039 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
SCNM1-205ENST00000471039 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCNM1-205ENST00000471039 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
SCNM1-205ENST00000471039 CAMKK2Q96RR4 588 aa16.59■□□□□ 0.25
SCNM1-205ENST00000471039 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
SCNM1-205ENST00000471039 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
SCNM1-205ENST00000471039 COL5A3P25940 1745 aaPredicted RBP16.58■□□□□ 0.24
SCNM1-205ENST00000471039 PLSCR1O15162 318 aa16.57■□□□□ 0.24
SCNM1-205ENST00000471039 PRIM1P49642 420 aaKnown RBP16.57■□□□□ 0.24
SCNM1-205ENST00000471039 C1orf141Q5JVX7 400 aa16.57■□□□□ 0.24
SCNM1-205ENST00000471039 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
SCNM1-205ENST00000471039 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
SCNM1-205ENST00000471039 TJP1Q07157 1748 aa16.56■□□□□ 0.24
SCNM1-205ENST00000471039 HSP90AB1P08238 724 aaKnown RBP16.55■□□□□ 0.24
SCNM1-205ENST00000471039 AKAP4Q5JQC9 854 aa16.55■□□□□ 0.24
SCNM1-205ENST00000471039 DCAF5Q96JK2 942 aa16.55■□□□□ 0.24
SCNM1-205ENST00000471039 CASZ1Q86V15 1759 aa16.55■□□□□ 0.24
SCNM1-205ENST00000471039 ANP32CO43423 234 aa16.54■□□□□ 0.24
SCNM1-205ENST00000471039 FCHSD2O94868 740 aa16.54■□□□□ 0.24
SCNM1-205ENST00000471039 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
SCNM1-205ENST00000471039 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
SCNM1-205ENST00000471039 PALLDQ8WX93 1383 aa16.52■□□□□ 0.24
SCNM1-205ENST00000471039 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.24
SCNM1-205ENST00000471039 MPRIPQ6WCQ1 1025 aa16.52■□□□□ 0.24
SCNM1-205ENST00000471039 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.24
SCNM1-205ENST00000471039 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
SCNM1-205ENST00000471039 UBR3Q6ZT12 1888 aa16.51■□□□□ 0.23
SCNM1-205ENST00000471039 TXNRD1Q16881 649 aa16.51■□□□□ 0.23
SCNM1-205ENST00000471039 ERVV-2B6SEH9 535 aa16.5■□□□□ 0.23
SCNM1-205ENST00000471039 PROM2Q8N271 834 aa16.5■□□□□ 0.23
SCNM1-205ENST00000471039 PIGBQ92521 554 aa16.5■□□□□ 0.23
SCNM1-205ENST00000471039 PLEKHF1Q96S99 279 aa16.5■□□□□ 0.23
SCNM1-205ENST00000471039 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
SCNM1-205ENST00000471039 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCNM1-205ENST00000471039 CEMIPQ8WUJ3 1361 aa16.49■□□□□ 0.23
SCNM1-205ENST00000471039 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
SCNM1-205ENST00000471039 CCDC184Q52MB2 194 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms