RNA–Protein interactions for RNA: ENST00000470983.5

DNMT3A-209, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-209ENST00000470983 USHBP1Q8N6Y0 703 aa20.57■□□□□ 0.88
DNMT3A-209ENST00000470983 NUP188Q5SRE5 1749 aa20.56■□□□□ 0.88
DNMT3A-209ENST00000470983 CC2D1BQ5T0F9 858 aaKnown RBP20.56■□□□□ 0.88
DNMT3A-209ENST00000470983 NBPF6Q5VWK0 638 aa20.56■□□□□ 0.88
DNMT3A-209ENST00000470983 NBPF4Q96M43 638 aa20.56■□□□□ 0.88
DNMT3A-209ENST00000470983 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
DNMT3A-209ENST00000470983 MARCH10Q8NA82 808 aaPredicted RBP20.55■□□□□ 0.88
DNMT3A-209ENST00000470983 MEGF6O75095 1541 aa20.54■□□□□ 0.88
DNMT3A-209ENST00000470983 SHANK3Q9BYB0 1731 aa20.54■□□□□ 0.88
DNMT3A-209ENST00000470983 RGPD3A6NKT7 1758 aaPredicted RBP20.54■□□□□ 0.88
DNMT3A-209ENST00000470983 RGPD4Q7Z3J3 1758 aa20.54■□□□□ 0.88
DNMT3A-209ENST00000470983 TXNRD1Q16881 649 aa20.5■□□□□ 0.87
DNMT3A-209ENST00000470983 EIF4A2Q14240 407 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-209ENST00000470983 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
DNMT3A-209ENST00000470983 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-209ENST00000470983 SLC15A2Q16348 729 aa20.48■□□□□ 0.87
DNMT3A-209ENST00000470983 ANO8Q9HCE9 1232 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-209ENST00000470983 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
DNMT3A-209ENST00000470983 PROM2Q8N271 834 aa20.47■□□□□ 0.87
DNMT3A-209ENST00000470983 EYA1Q99502 592 aa20.47■□□□□ 0.87
DNMT3A-209ENST00000470983 MTFR1LQ9H019 292 aa20.47■□□□□ 0.87
DNMT3A-209ENST00000470983 KAT6BQ8WYB5 2073 aa20.47■□□□□ 0.87
DNMT3A-209ENST00000470983 ZBTB7AO95365 584 aa20.46■□□□□ 0.87
DNMT3A-209ENST00000470983 PTF1AQ7RTS3 328 aa20.46■□□□□ 0.87
DNMT3A-209ENST00000470983 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
DNMT3A-209ENST00000470983 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
DNMT3A-209ENST00000470983 RAPGEF4Q8WZA2 1011 aa20.45■□□□□ 0.86
DNMT3A-209ENST00000470983 PKD1L3Q7Z443 1732 aa20.44■□□□□ 0.86
DNMT3A-209ENST00000470983 DOT1LQ8TEK3 1739 aa20.44■□□□□ 0.86
DNMT3A-209ENST00000470983 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-209ENST00000470983 MTHFSP49914 203 aa20.43■□□□□ 0.86
DNMT3A-209ENST00000470983 ZCRB1Q8TBF4 217 aaKnown RBP20.43■□□□□ 0.86
DNMT3A-209ENST00000470983 ACSBG1Q96GR2 724 aa20.43■□□□□ 0.86
DNMT3A-209ENST00000470983 PTGER2P43116 358 aa20.42■□□□□ 0.86
DNMT3A-209ENST00000470983 ATF5Q9Y2D1 282 aaPredicted RBP20.42■□□□□ 0.86
DNMT3A-209ENST00000470983 BTAF1O14981 1849 aa20.41■□□□□ 0.86
DNMT3A-209ENST00000470983 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
DNMT3A-209ENST00000470983 HMGB2P26583 209 aaKnown RBP20.39■□□□□ 0.85
DNMT3A-209ENST00000470983 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
DNMT3A-209ENST00000470983 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
DNMT3A-209ENST00000470983 IL13P35225 146 aa20.37■□□□□ 0.85
DNMT3A-209ENST00000470983 AEBP1Q8IUX7 1158 aa20.37■□□□□ 0.85
DNMT3A-209ENST00000470983 SLC16A10Q8TF71 515 aa20.37■□□□□ 0.85
DNMT3A-209ENST00000470983 ARXQ96QS3 562 aa20.37■□□□□ 0.85
DNMT3A-209ENST00000470983 PDGFDQ9GZP0 370 aaPredicted RBP20.37■□□□□ 0.85
DNMT3A-209ENST00000470983 COL3A1P02461 1466 aaPredicted RBP20.37■□□□□ 0.85
DNMT3A-209ENST00000470983 CASZ1Q86V15 1759 aa20.36■□□□□ 0.85
DNMT3A-209ENST00000470983 TOGARAM1Q9Y4F4 1720 aa20.36■□□□□ 0.85
DNMT3A-209ENST00000470983 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
DNMT3A-209ENST00000470983 SLC27A3Q5K4L6 730 aa20.36■□□□□ 0.85
DNMT3A-209ENST00000470983 PCDH11XQ9BZA7 1347 aa20.35■□□□□ 0.85
DNMT3A-209ENST00000470983 PCDH11YQ9BZA8 1340 aa20.35■□□□□ 0.85
DNMT3A-209ENST00000470983 CYP27B1O15528 508 aa20.34■□□□□ 0.85
DNMT3A-209ENST00000470983 MAP3K5Q99683 1374 aa20.34■□□□□ 0.85
DNMT3A-209ENST00000470983 POLD1P28340 1107 aa20.33■□□□□ 0.85
DNMT3A-209ENST00000470983 ZNF784Q8NCA9 323 aaPredicted RBP20.33■□□□□ 0.85
DNMT3A-209ENST00000470983 ITGB4P16144 1822 aa20.32■□□□□ 0.84
DNMT3A-209ENST00000470983 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
DNMT3A-209ENST00000470983 SULT6B1Q6IMI4 303 aa20.32■□□□□ 0.84
DNMT3A-209ENST00000470983 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
DNMT3A-209ENST00000470983 SGIP1Q9BQI5 828 aa20.32■□□□□ 0.84
DNMT3A-209ENST00000470983 SPG7Q9UQ90 795 aa20.32■□□□□ 0.84
DNMT3A-209ENST00000470983 DIAPH1O60610 1272 aaKnown RBP20.31■□□□□ 0.84
DNMT3A-209ENST00000470983 PRIM1P49642 420 aaKnown RBP20.31■□□□□ 0.84
DNMT3A-209ENST00000470983 KDRP35968 1356 aa20.3■□□□□ 0.84
DNMT3A-209ENST00000470983 HMOX1P09601 288 aa20.29■□□□□ 0.84
DNMT3A-209ENST00000470983 GPR162Q16538 588 aa20.28■□□□□ 0.84
DNMT3A-209ENST00000470983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.28■□□□□ 0.84
DNMT3A-209ENST00000470983 U2SURPO15042 1029 aaKnown RBP20.26■□□□□ 0.83
DNMT3A-209ENST00000470983 PHKG2P15735 406 aa20.26■□□□□ 0.83
DNMT3A-209ENST00000470983 CFAP53Q96M91 514 aa20.26■□□□□ 0.83
DNMT3A-209ENST00000470983 TFCP2L1Q9NZI6 479 aa20.26■□□□□ 0.83
DNMT3A-209ENST00000470983 LY75O60449 1722 aa20.25■□□□□ 0.83
DNMT3A-209ENST00000470983 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
DNMT3A-209ENST00000470983 PLEKHO1Q53GL0 409 aaPredicted RBP20.25■□□□□ 0.83
DNMT3A-209ENST00000470983 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
DNMT3A-209ENST00000470983 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
DNMT3A-209ENST00000470983 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
DNMT3A-209ENST00000470983 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
DNMT3A-209ENST00000470983 NKX1-1Q15270 411 aaPredicted RBP20.23■□□□□ 0.83
DNMT3A-209ENST00000470983 LRRC4BQ9NT99 713 aa20.23■□□□□ 0.83
DNMT3A-209ENST00000470983 ZNF827Q17R98 1081 aa20.22■□□□□ 0.83
DNMT3A-209ENST00000470983 AMOTQ4VCS5 1084 aa20.22■□□□□ 0.83
DNMT3A-209ENST00000470983 MPRIPQ6WCQ1 1025 aa20.22■□□□□ 0.83
DNMT3A-209ENST00000470983 PAPPAQ13219 1627 aa20.21■□□□□ 0.83
DNMT3A-209ENST00000470983 KDM6AO15550 1401 aaPredicted RBP20.2■□□□□ 0.82
DNMT3A-209ENST00000470983 C1QTNF8P60827 252 aa20.2■□□□□ 0.82
DNMT3A-209ENST00000470983 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
DNMT3A-209ENST00000470983 SCN11AQ9UI33 1791 aa20.2■□□□□ 0.82
DNMT3A-209ENST00000470983 ZNF316A6NFI3 1004 aaPredicted RBP20.19■□□□□ 0.82
DNMT3A-209ENST00000470983 GRIN3BO60391 1043 aa20.19■□□□□ 0.82
DNMT3A-209ENST00000470983 KCNQ4P56696 695 aa20.19■□□□□ 0.82
DNMT3A-209ENST00000470983 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
DNMT3A-209ENST00000470983 PIGBQ92521 554 aa20.18■□□□□ 0.82
DNMT3A-209ENST00000470983 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
DNMT3A-209ENST00000470983 RALBP1Q15311 655 aa20.17■□□□□ 0.82
DNMT3A-209ENST00000470983 FLAD1Q8NFF5 587 aa20.17■□□□□ 0.82
DNMT3A-209ENST00000470983 CCNL1Q9UK58 526 aaPredicted RBP20.17■□□□□ 0.82
DNMT3A-209ENST00000470983 PNPLA7Q6ZV29 1317 aa20.17■□□□□ 0.82
DNMT3A-209ENST00000470983 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms