RNA–Protein interactions for RNA: ENST00000470972.5

SLC44A1-205, Transcript of solute carrier family 44 member 1, humanhuman

TSL 1 (best)

Gene SLC44A1, Length 10,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-205ENST00000470972 LUZP1Q86V48 1076 aa13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 UBXN4Q92575 508 aa13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 CCDC85AQ96PX6 553 aaPredicted RBP13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 IPO4Q8TEX9 1081 aaKnown RBP13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 BCAR3O75815 825 aa13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.38□□□□□ -0.27
SLC44A1-205ENST00000470972 CDKL5O76039 1030 aa13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 EXOSC9Q06265 439 aaKnown RBP13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 MTHFSP49914 203 aa13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 CABP4P57796 275 aa13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 SYCE3A1L190 88 aa13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 TWISTNBQ3B726 338 aaPredicted RBP13.37□□□□□ -0.27
SLC44A1-205ENST00000470972 PRKAR2BP31323 418 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 NUTM2BA6NNL0 878 aaPredicted RBP13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 NUTM2EB1AL46 878 aaPredicted RBP13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 CETN2P41208 172 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 NUTM2AQ8IVF1 878 aaPredicted RBP13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 BLOC1S2Q6QNY1 142 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 LIG1P18858 919 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 ESCO1Q5FWF5 840 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 GRIPAP1Q4V328 841 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 HDGFL1Q5TGJ6 251 aa13.36□□□□□ -0.27
SLC44A1-205ENST00000470972 HOOK3Q86VS8 718 aa13.35□□□□□ -0.27
SLC44A1-205ENST00000470972 TMCO5BA8MYB1 307 aa13.35□□□□□ -0.27
SLC44A1-205ENST00000470972 PPP1R12BO60237 982 aaPredicted RBP13.35□□□□□ -0.27
SLC44A1-205ENST00000470972 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
SLC44A1-205ENST00000470972 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
SLC44A1-205ENST00000470972 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
SLC44A1-205ENST00000470972 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
SLC44A1-205ENST00000470972 CCDC88BA6NC98 1476 aa13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 SEC63Q9UGP8 760 aaKnown RBP13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 WDR70Q9NW82 654 aa13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 DHX57Q6P158 1386 aaKnown RBP13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 MAP9Q49MG5 647 aa13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 SRRTQ9BXP5 876 aaKnown RBP13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 SF3B2Q13435 895 aaKnown RBP13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 PPM1EQ8WY54 764 aa13.34□□□□□ -0.27
SLC44A1-205ENST00000470972 MAP3K11Q16584 847 aa13.33□□□□□ -0.27
SLC44A1-205ENST00000470972 KIF5CO60282 957 aa13.33□□□□□ -0.27
SLC44A1-205ENST00000470972 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 GPRASP1Q5JY77 1395 aa13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 AAMPQ13685 434 aa13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 SPTY2D1Q68D10 685 aaPredicted RBP13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 CTNNA2P26232 953 aa13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 NACADO15069 1562 aa13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 GCC1Q96CN9 775 aa13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 ZSCAN25Q6NSZ9 544 aa13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 CECR2Q9BXF3 1484 aa13.33□□□□□ -0.28
SLC44A1-205ENST00000470972 TSG101Q99816 390 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 PTPN14Q15678 1187 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 MYZAPP0CAP1 466 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 URI1O94763 535 aaPredicted RBP13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 TNIP1Q15025 636 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 PPP4R3AQ6IN85 833 aa13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 NUP88Q99567 741 aaPredicted RBP13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 TRMT1Q9NXH9 659 aaKnown RBP13.32□□□□□ -0.28
SLC44A1-205ENST00000470972 FAM107BQ9H098 131 aa13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 SFPQP23246 707 aaKnown RBP eCLIP13.31□□□□□ -0.283e-6■■□□□ 13
SLC44A1-205ENST00000470972 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 CPLX3Q8WVH0 158 aa13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 HLTFQ14527 1009 aaKnown RBP eCLIP13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 TMEM87AQ8NBN3 555 aa13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 CCDC150Q8NCX0 1101 aa13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 DNAI2Q9GZS0 605 aa13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 PRPF4BQ13523 1007 aaKnown RBP13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 FERMT2Q96AC1 680 aa13.31□□□□□ -0.28
SLC44A1-205ENST00000470972 CCDC175P0C221 793 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 WASF1Q92558 559 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 MINDY4BA8MYZ0 360 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 GBP3Q9H0R5 595 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 ATP2C2O75185 946 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 GUCY1B3Q02153 619 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
SLC44A1-205ENST00000470972 CYB5RLQ6IPT4 315 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms