RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 SIX5Q8N196 739 aa7.11□□□□□ -1.27
PRPF3-204ENST00000470824 EHBP1Q8NDI1 1231 aa7.11□□□□□ -1.27
PRPF3-204ENST00000470824 TRIM52Q96A61 297 aa7.11□□□□□ -1.27
PRPF3-204ENST00000470824 PRKD2Q9BZL6 878 aa7.11□□□□□ -1.27
PRPF3-204ENST00000470824 IVNS1ABPQ9Y6Y0 642 aa7.11□□□□□ -1.27
PRPF3-204ENST00000470824 MYCP01106 439 aaPredicted RBP7.1□□□□□ -1.27
PRPF3-204ENST00000470824 SSFA2P28290 1259 aa7.1□□□□□ -1.27
PRPF3-204ENST00000470824 SEC13P55735 322 aa7.1□□□□□ -1.27
PRPF3-204ENST00000470824 ARID5BQ14865 1188 aa7.1□□□□□ -1.27
PRPF3-204ENST00000470824 INTS6LQ5JSJ4 861 aaKnown RBP7.1□□□□□ -1.27
PRPF3-204ENST00000470824 RC3H1Q5TC82 1133 aaKnown RBP7.1□□□□□ -1.27
PRPF3-204ENST00000470824 CCDC102BQ68D86 513 aa7.1□□□□□ -1.27
PRPF3-204ENST00000470824 TPCN2Q8NHX9 752 aa7.1□□□□□ -1.27
PRPF3-204ENST00000470824 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
PRPF3-204ENST00000470824 PCDHGA11Q9Y5H2 935 aa7.1□□□□□ -1.27
PRPF3-204ENST00000470824 CCER1Q8TC90 406 aaPredicted RBP7.09□□□□□ -1.27
PRPF3-204ENST00000470824 CDK15Q96Q40 435 aa7.09□□□□□ -1.27
PRPF3-204ENST00000470824 KIAA1024Q9UPX6 916 aa7.09□□□□□ -1.27
PRPF3-204ENST00000470824 GNEQ9Y223 722 aaKnown RBP7.09□□□□□ -1.27
PRPF3-204ENST00000470824 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
PRPF3-204ENST00000470824 DKK1O94907 266 aa7.08□□□□□ -1.28
PRPF3-204ENST00000470824 ATP2B4P23634 1241 aa7.08□□□□□ -1.28
PRPF3-204ENST00000470824 ARID4AP29374 1257 aaPredicted RBP7.08□□□□□ -1.28
PRPF3-204ENST00000470824 MFAP1P55081 439 aaKnown RBP7.08□□□□□ -1.28
PRPF3-204ENST00000470824 DHX9Q08211 1270 aaKnown RBP7.08□□□□□ -1.28
PRPF3-204ENST00000470824 MPNDQ8N594 471 aa7.08□□□□□ -1.28
PRPF3-204ENST00000470824 PHLDB3Q6NSJ2 640 aa7.07□□□□□ -1.28
PRPF3-204ENST00000470824 LIAT1Q6ZQX7 453 aa7.07□□□□□ -1.28
PRPF3-204ENST00000470824 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
PRPF3-204ENST00000470824 LCE2BO14633 110 aa7.06□□□□□ -1.28
PRPF3-204ENST00000470824 CC2D2BQ6DHV5 1058 aa7.06□□□□□ -1.28
PRPF3-204ENST00000470824 TXNDC2Q86VQ3 553 aa7.06□□□□□ -1.28
PRPF3-204ENST00000470824 SLAIN2Q9P270 581 aa7.06□□□□□ -1.28
PRPF3-204ENST00000470824 NRG2O14511 850 aaPredicted RBP7.05□□□□□ -1.28
PRPF3-204ENST00000470824 FSHRP23945 695 aa7.05□□□□□ -1.28
PRPF3-204ENST00000470824 SLC19A1P41440 591 aa7.05□□□□□ -1.28
PRPF3-204ENST00000470824 GRM5P41594 1212 aa7.05□□□□□ -1.28
PRPF3-204ENST00000470824 ERVK-9P63128 1117 aa7.05□□□□□ -1.28
PRPF3-204ENST00000470824 SND1Q7KZF4 910 aaKnown RBP eCLIP7.05□□□□□ -1.28
PRPF3-204ENST00000470824 HINFPQ9BQA5 517 aa7.05□□□□□ -1.28
PRPF3-204ENST00000470824 M0R2N6 131 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 WNT7AO00755 349 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 SIAH2O43255 324 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 PRMT3O60678 531 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 SCTRP47872 440 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 NR5A1Q13285 461 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 NPM2Q86SE8 214 aaKnown RBP7.04□□□□□ -1.28
PRPF3-204ENST00000470824 C1orf216Q8TAB5 229 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 MTMR7Q9Y216 660 aa7.04□□□□□ -1.28
PRPF3-204ENST00000470824 ADH1CP00326 375 aa7.03□□□□□ -1.28
PRPF3-204ENST00000470824 CCDC27Q2M243 656 aa7.03□□□□□ -1.28
PRPF3-204ENST00000470824 CCDC116Q8IYX3 515 aa7.03□□□□□ -1.28
PRPF3-204ENST00000470824 PRIMPOLQ96LW4 560 aa7.03□□□□□ -1.28
PRPF3-204ENST00000470824 TMPRSS4Q9NRS4 437 aa7.03□□□□□ -1.28
PRPF3-204ENST00000470824 TLL2Q9Y6L7 1015 aa7.03□□□□□ -1.28
PRPF3-204ENST00000470824 MYT1Q01538 1121 aa7.02□□□□□ -1.29
PRPF3-204ENST00000470824 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.02□□□□□ -1.29
PRPF3-204ENST00000470824 RGS22Q8NE09 1264 aa7.02□□□□□ -1.29
PRPF3-204ENST00000470824 EMID1Q96A84 441 aaPredicted RBP7.02□□□□□ -1.29
PRPF3-204ENST00000470824 OSBPL3Q9H4L5 887 aa7.02□□□□□ -1.29
PRPF3-204ENST00000470824 CYLDQ9NQC7 956 aa7.02□□□□□ -1.29
PRPF3-204ENST00000470824 CXXC1Q9P0U4 656 aaPredicted RBP7.02□□□□□ -1.29
PRPF3-204ENST00000470824 V9GY48 417 aaPredicted RBP7.02□□□□□ -1.29
PRPF3-204ENST00000470824 BACH1O14867 736 aa7.01□□□□□ -1.29
PRPF3-204ENST00000470824 RANGAP1P46060 587 aaPredicted RBP7.01□□□□□ -1.29
PRPF3-204ENST00000470824 OCLNQ16625 522 aa7.01□□□□□ -1.29
PRPF3-204ENST00000470824 PPP1R26Q5T8A7 1209 aaPredicted RBP7.01□□□□□ -1.29
PRPF3-204ENST00000470824 TAS1R3Q7RTX0 852 aa7.01□□□□□ -1.29
PRPF3-204ENST00000470824 ZNF784Q8NCA9 323 aaPredicted RBP7.01□□□□□ -1.29
PRPF3-204ENST00000470824 TSEN2Q8NCE0 465 aaKnown RBP7.01□□□□□ -1.29
PRPF3-204ENST00000470824 MRGPRX2Q96LB1 330 aa7.01□□□□□ -1.29
PRPF3-204ENST00000470824 ZNF358Q9NW07 568 aa7.01□□□□□ -1.29
PRPF3-204ENST00000470824 PDZRN3Q9UPQ7 1066 aa7.01□□□□□ -1.29
PRPF3-204ENST00000470824 SPRYD7Q5W111 196 aa7□□□□□ -1.29
PRPF3-204ENST00000470824 CYP2U1Q7Z449 544 aa7□□□□□ -1.29
PRPF3-204ENST00000470824 PGPEP1Q9NXJ5 209 aa7□□□□□ -1.29
PRPF3-204ENST00000470824 EMILIN1Q9Y6C2 1016 aa7□□□□□ -1.29
PRPF3-204ENST00000470824 TMEM229AB2RXF0 380 aa6.99□□□□□ -1.29
PRPF3-204ENST00000470824 WASLO00401 505 aaPredicted RBP6.99□□□□□ -1.29
PRPF3-204ENST00000470824 LILRA1O75019 489 aa6.99□□□□□ -1.29
PRPF3-204ENST00000470824 LGR5O75473 907 aa6.99□□□□□ -1.29
PRPF3-204ENST00000470824 WEE1P30291 646 aa6.99□□□□□ -1.29
PRPF3-204ENST00000470824 GDF10P55107 478 aa6.99□□□□□ -1.29
PRPF3-204ENST00000470824 GNRH1P01148 92 aa6.98□□□□□ -1.29
PRPF3-204ENST00000470824 INHAP05111 366 aa6.98□□□□□ -1.29
PRPF3-204ENST00000470824 SERPINB4P48594 390 aa6.98□□□□□ -1.29
PRPF3-204ENST00000470824 SCNN1DP51172 638 aa6.98□□□□□ -1.29
PRPF3-204ENST00000470824 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
PRPF3-204ENST00000470824 ZNF697Q5TEC3 545 aa6.98□□□□□ -1.29
PRPF3-204ENST00000470824 ZNF598Q86UK7 904 aaKnown RBP6.98□□□□□ -1.29
PRPF3-204ENST00000470824 SOWAHDA6NJG2 315 aa6.97□□□□□ -1.29
PRPF3-204ENST00000470824 ALDH1A1P00352 501 aa6.97□□□□□ -1.29
PRPF3-204ENST00000470824 NR3C2P08235 984 aa6.97□□□□□ -1.29
PRPF3-204ENST00000470824 IGFBP4P22692 258 aa6.97□□□□□ -1.29
PRPF3-204ENST00000470824 ADD1P35611 737 aaKnown RBP6.97□□□□□ -1.29
PRPF3-204ENST00000470824 SCNN1AP37088 669 aa6.97□□□□□ -1.29
PRPF3-204ENST00000470824 ETNK1Q9HBU6 452 aa6.97□□□□□ -1.29
PRPF3-204ENST00000470824 WASF2Q9Y6W5 498 aa6.97□□□□□ -1.29
PRPF3-204ENST00000470824 PTCD1O75127 700 aaKnown RBP6.96□□□□□ -1.3
PRPF3-204ENST00000470824 FOXC1Q12948 553 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms