RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CLUAP1Q96AJ1 413 aa8.54□□□□□ -1.04
COL9A1-206ENST00000470652 ADAMTS8Q9UP79 889 aa8.54□□□□□ -1.04
COL9A1-206ENST00000470652 ERVH48-1M5A8F1 160 aa8.53□□□□□ -1.04
COL9A1-206ENST00000470652 GDF11O95390 407 aa8.53□□□□□ -1.04
COL9A1-206ENST00000470652 RASSF7Q02833 373 aa8.53□□□□□ -1.04
COL9A1-206ENST00000470652 CBLBQ13191 982 aa8.53□□□□□ -1.04
COL9A1-206ENST00000470652 SEMA3FQ13275 785 aa8.53□□□□□ -1.04
COL9A1-206ENST00000470652 COL25A1Q9BXS0 654 aaPredicted RBP8.53□□□□□ -1.04
COL9A1-206ENST00000470652 A6NJR5 290 aa8.52□□□□□ -1.05
COL9A1-206ENST00000470652 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.05
COL9A1-206ENST00000470652 CCDC155Q8N6L0 562 aa8.51□□□□□ -1.05
COL9A1-206ENST00000470652 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
COL9A1-206ENST00000470652 Q6ZVU0 165 aa8.5□□□□□ -1.05
COL9A1-206ENST00000470652 FNBP4Q8N3X1 1017 aaPredicted RBP8.5□□□□□ -1.05
COL9A1-206ENST00000470652 ZNF784Q8NCA9 323 aaPredicted RBP8.5□□□□□ -1.05
COL9A1-206ENST00000470652 NANOS1Q8WY41 292 aaKnown RBP8.5□□□□□ -1.05
COL9A1-206ENST00000470652 TMPRSS4Q9NRS4 437 aa8.5□□□□□ -1.05
COL9A1-206ENST00000470652 SPINT1O43278 529 aa8.49□□□□□ -1.05
COL9A1-206ENST00000470652 VWA5B2Q8N398 1253 aa8.49□□□□□ -1.05
COL9A1-206ENST00000470652 RNF225M0QZC1 329 aaPredicted RBP8.48□□□□□ -1.05
COL9A1-206ENST00000470652 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
COL9A1-206ENST00000470652 ALG2Q9H553 416 aa8.48□□□□□ -1.05
COL9A1-206ENST00000470652 ZNF385CQ66K41 422 aaPredicted RBP8.47□□□□□ -1.05
COL9A1-206ENST00000470652 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
COL9A1-206ENST00000470652 PHTF2Q8N3S3 785 aa8.47□□□□□ -1.05
COL9A1-206ENST00000470652 SVOPQ8N4V2 548 aa8.47□□□□□ -1.05
COL9A1-206ENST00000470652 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
COL9A1-206ENST00000470652 PCDHB11Q9Y5F2 797 aa8.47□□□□□ -1.05
COL9A1-206ENST00000470652 CDC14CA4D256 554 aa8.46□□□□□ -1.06
COL9A1-206ENST00000470652 SLC35F4A4IF30 521 aa8.46□□□□□ -1.06
COL9A1-206ENST00000470652 LILRA1O75019 489 aa8.46□□□□□ -1.06
COL9A1-206ENST00000470652 ESF1Q9H501 851 aaKnown RBP8.46□□□□□ -1.06
COL9A1-206ENST00000470652 NISCHQ9Y2I1 1504 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 POM121CA8CG34 1229 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 ITGA6P23229 1130 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 ADD1P35611 737 aaKnown RBP8.45□□□□□ -1.06
COL9A1-206ENST00000470652 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
COL9A1-206ENST00000470652 ERVK-9P63128 1117 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 RELBQ01201 579 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 CC2D2BQ6DHV5 1058 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 SV2AQ7L0J3 742 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 WHAMMQ8TF30 809 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 CCDC85AQ96PX6 553 aaPredicted RBP8.45□□□□□ -1.06
COL9A1-206ENST00000470652 INSM2Q96T92 566 aaPredicted RBP8.45□□□□□ -1.06
COL9A1-206ENST00000470652 CYLDQ9NQC7 956 aa8.45□□□□□ -1.06
COL9A1-206ENST00000470652 MAP7D1Q3KQU3 841 aa8.44□□□□□ -1.06
COL9A1-206ENST00000470652 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
COL9A1-206ENST00000470652 CHIC2Q9UKJ5 165 aa8.44□□□□□ -1.06
COL9A1-206ENST00000470652 TRAK2O60296 914 aa8.43□□□□□ -1.06
COL9A1-206ENST00000470652 ADH1AP07327 375 aa8.43□□□□□ -1.06
COL9A1-206ENST00000470652 USP4Q13107 963 aa8.43□□□□□ -1.06
COL9A1-206ENST00000470652 NFATC2IPQ8NCF5 419 aa8.43□□□□□ -1.06
COL9A1-206ENST00000470652 ZNF395Q9H8N7 513 aaPredicted RBP8.43□□□□□ -1.06
COL9A1-206ENST00000470652 POLMQ9NP87 494 aaPredicted RBP8.43□□□□□ -1.06
COL9A1-206ENST00000470652 DOLKQ9UPQ8 538 aa8.43□□□□□ -1.06
COL9A1-206ENST00000470652 MYCP01106 439 aaPredicted RBP8.42□□□□□ -1.06
COL9A1-206ENST00000470652 SLURP2P0DP57 97 aa8.42□□□□□ -1.06
COL9A1-206ENST00000470652 IRS1P35568 1242 aa8.42□□□□□ -1.06
COL9A1-206ENST00000470652 MARSP56192 900 aaKnown RBP8.42□□□□□ -1.06
COL9A1-206ENST00000470652 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
COL9A1-206ENST00000470652 ZMYND15Q9H091 742 aa8.42□□□□□ -1.06
COL9A1-206ENST00000470652 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
COL9A1-206ENST00000470652 SCTRP47872 440 aa8.41□□□□□ -1.06
COL9A1-206ENST00000470652 TSGA10IPQ3SY00 556 aa8.41□□□□□ -1.06
COL9A1-206ENST00000470652 PLPP7Q8NBV4 271 aa8.41□□□□□ -1.06
COL9A1-206ENST00000470652 ADAMTS19Q8TE59 1207 aa8.41□□□□□ -1.06
COL9A1-206ENST00000470652 CDCA7Q9BWT1 371 aaPredicted RBP8.41□□□□□ -1.06
COL9A1-206ENST00000470652 ARHGEF15O94989 841 aa8.4□□□□□ -1.06
COL9A1-206ENST00000470652 PTGIRP43119 386 aa8.4□□□□□ -1.06
COL9A1-206ENST00000470652 GPAT2Q6NUI2 795 aa8.4□□□□□ -1.06
COL9A1-206ENST00000470652 CYP2U1Q7Z449 544 aa8.4□□□□□ -1.06
COL9A1-206ENST00000470652 GLMNQ92990 594 aa8.4□□□□□ -1.06
COL9A1-206ENST00000470652 PIK3CDO00329 1044 aa8.39□□□□□ -1.07
COL9A1-206ENST00000470652 LZTS3O60299 673 aaPredicted RBP8.39□□□□□ -1.07
COL9A1-206ENST00000470652 SKIP12755 728 aa8.39□□□□□ -1.07
COL9A1-206ENST00000470652 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
COL9A1-206ENST00000470652 RNF217Q8TC41 542 aa8.39□□□□□ -1.07
COL9A1-206ENST00000470652 CALR3Q96L12 384 aaKnown RBP8.39□□□□□ -1.07
COL9A1-206ENST00000470652 OXLD1Q5BKU9 147 aa8.38□□□□□ -1.07
COL9A1-206ENST00000470652 OSBPL3Q9H4L5 887 aa8.38□□□□□ -1.07
COL9A1-206ENST00000470652 SENP3-EIF4A1A0A087X0R7 540 aa8.37□□□□□ -1.07
COL9A1-206ENST00000470652 GNRH1P01148 92 aa8.37□□□□□ -1.07
COL9A1-206ENST00000470652 ZNF777Q9ULD5 760 aaPredicted RBP8.37□□□□□ -1.07
COL9A1-206ENST00000470652 DNMT3AQ9Y6K1 912 aaPredicted RBP8.37□□□□□ -1.07
COL9A1-206ENST00000470652 ADAMTS2O95450 1211 aa8.36□□□□□ -1.07
COL9A1-206ENST00000470652 EML3Q32P44 896 aa8.36□□□□□ -1.07
COL9A1-206ENST00000470652 LYPD4Q6UWN0 246 aa8.36□□□□□ -1.07
COL9A1-206ENST00000470652 SCARF2Q96GP6 870 aaPredicted RBP8.36□□□□□ -1.07
COL9A1-206ENST00000470652 UCN2Q96RP3 112 aa8.36□□□□□ -1.07
COL9A1-206ENST00000470652 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
COL9A1-206ENST00000470652 KANK3Q6NY19 840 aa8.35□□□□□ -1.07
COL9A1-206ENST00000470652 ERICH6Q7L0X2 663 aa8.35□□□□□ -1.07
COL9A1-206ENST00000470652 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
COL9A1-206ENST00000470652 ATP9BO43861 1147 aa8.34□□□□□ -1.07
COL9A1-206ENST00000470652 IGHA1P01876 353 aa8.34□□□□□ -1.07
COL9A1-206ENST00000470652 MAP3K10Q02779 954 aa8.34□□□□□ -1.07
COL9A1-206ENST00000470652 TBC1D9Q6ZT07 1266 aa8.34□□□□□ -1.07
COL9A1-206ENST00000470652 C14orf37Q86TY3 774 aa8.34□□□□□ -1.07
COL9A1-206ENST00000470652 NOD1Q9Y239 953 aa8.34□□□□□ -1.07
COL9A1-206ENST00000470652 GPC1P35052 558 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms