RNA–Protein interactions for RNA: ENST00000470535.2

ABCA2-215, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-215ENST00000470535 CFAP53Q96M91 514 aa16.08■□□□□ 0.16
ABCA2-215ENST00000470535 BAG6P46379 1132 aa16.07■□□□□ 0.16
ABCA2-215ENST00000470535 BCL9O00512 1426 aa16.06■□□□□ 0.16
ABCA2-215ENST00000470535 PARD3Q8TEW0 1356 aa16.06■□□□□ 0.16
ABCA2-215ENST00000470535 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
ABCA2-215ENST00000470535 PCDH11XQ9BZA7 1347 aa16.05■□□□□ 0.16
ABCA2-215ENST00000470535 PCDH11YQ9BZA8 1340 aa16.05■□□□□ 0.16
ABCA2-215ENST00000470535 APBA3O96018 575 aa16.05■□□□□ 0.16
ABCA2-215ENST00000470535 RALBP1Q15311 655 aa16.05■□□□□ 0.16
ABCA2-215ENST00000470535 SULT6B1Q6IMI4 303 aa16.05■□□□□ 0.16
ABCA2-215ENST00000470535 RGPD1P0DJD0 1748 aa16.05■□□□□ 0.16
ABCA2-215ENST00000470535 AEBP1Q8IUX7 1158 aa16.04■□□□□ 0.16
ABCA2-215ENST00000470535 U2SURPO15042 1029 aaKnown RBP16.03■□□□□ 0.16
ABCA2-215ENST00000470535 ACSBG1Q96GR2 724 aa16.03■□□□□ 0.16
ABCA2-215ENST00000470535 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
ABCA2-215ENST00000470535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.03■□□□□ 0.16
ABCA2-215ENST00000470535 PLEKHG2Q9H7P9 1386 aa16.02■□□□□ 0.16
ABCA2-215ENST00000470535 EN1Q05925 392 aaPredicted RBP16.02■□□□□ 0.16
ABCA2-215ENST00000470535 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
ABCA2-215ENST00000470535 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.15
ABCA2-215ENST00000470535 KDRP35968 1356 aa16.01■□□□□ 0.15
ABCA2-215ENST00000470535 HMOX1P09601 288 aa16.01■□□□□ 0.15
ABCA2-215ENST00000470535 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
ABCA2-215ENST00000470535 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
ABCA2-215ENST00000470535 PSDA5PKW4 1024 aaPredicted RBP16■□□□□ 0.15
ABCA2-215ENST00000470535 CYP27B1O15528 508 aa16■□□□□ 0.15
ABCA2-215ENST00000470535 KCNQ2O43526 872 aa16■□□□□ 0.15
ABCA2-215ENST00000470535 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
ABCA2-215ENST00000470535 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
ABCA2-215ENST00000470535 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
ABCA2-215ENST00000470535 IFNL2Q8IZJ0 200 aa15.99■□□□□ 0.15
ABCA2-215ENST00000470535 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
ABCA2-215ENST00000470535 SHANK3Q9BYB0 1731 aa15.99■□□□□ 0.15
ABCA2-215ENST00000470535 SBF2Q86WG5 1849 aa15.98■□□□□ 0.15
ABCA2-215ENST00000470535 MYBBP1AQ9BQG0 1328 aaKnown RBP15.97■□□□□ 0.15
ABCA2-215ENST00000470535 PHKG2P15735 406 aa15.97■□□□□ 0.15
ABCA2-215ENST00000470535 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
ABCA2-215ENST00000470535 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
ABCA2-215ENST00000470535 ZNF530Q6P9A1 599 aaPredicted RBP15.97■□□□□ 0.15
ABCA2-215ENST00000470535 CAMKK2Q96RR4 588 aa15.97■□□□□ 0.15
ABCA2-215ENST00000470535 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
ABCA2-215ENST00000470535 NHSQ6T4R5 1651 aa15.96■□□□□ 0.15
ABCA2-215ENST00000470535 PLSCR1O15162 318 aa15.96■□□□□ 0.15
ABCA2-215ENST00000470535 U2AF1L5P0DN76 240 aaPredicted RBP15.96■□□□□ 0.15
ABCA2-215ENST00000470535 U2AF1Q01081 240 aaKnown RBP eCLIP15.96■□□□□ 0.15
ABCA2-215ENST00000470535 NKX1-1Q15270 411 aaPredicted RBP15.96■□□□□ 0.15
ABCA2-215ENST00000470535 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
ABCA2-215ENST00000470535 HSP90AB1P08238 724 aaKnown RBP15.94■□□□□ 0.14
ABCA2-215ENST00000470535 DOT1LQ8TEK3 1739 aa15.94■□□□□ 0.14
ABCA2-215ENST00000470535 R3HDM1Q15032 1099 aaKnown RBP15.93■□□□□ 0.14
ABCA2-215ENST00000470535 FCHSD2O94868 740 aa15.92■□□□□ 0.14
ABCA2-215ENST00000470535 PRKAR2BP31323 418 aa15.92■□□□□ 0.14
ABCA2-215ENST00000470535 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
ABCA2-215ENST00000470535 DCAF5Q96JK2 942 aa15.92■□□□□ 0.14
ABCA2-215ENST00000470535 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
ABCA2-215ENST00000470535 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
ABCA2-215ENST00000470535 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
ABCA2-215ENST00000470535 TMOD3Q9NYL9 352 aa15.9■□□□□ 0.14
ABCA2-215ENST00000470535 BTAF1O14981 1849 aa15.89■□□□□ 0.13
ABCA2-215ENST00000470535 ANP32CO43423 234 aa15.89■□□□□ 0.13
ABCA2-215ENST00000470535 NEFMP07197 916 aa15.89■□□□□ 0.13
ABCA2-215ENST00000470535 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
ABCA2-215ENST00000470535 GAS2L2Q8NHY3 880 aa15.89■□□□□ 0.13
ABCA2-215ENST00000470535 KAT6BQ8WYB5 2073 aa15.89■□□□□ 0.13
ABCA2-215ENST00000470535 RGPD3A6NKT7 1758 aaPredicted RBP15.89■□□□□ 0.13
ABCA2-215ENST00000470535 RGPD4Q7Z3J3 1758 aa15.89■□□□□ 0.13
ABCA2-215ENST00000470535 LRP5O75197 1615 aa15.88■□□□□ 0.13
ABCA2-215ENST00000470535 ERVV-2B6SEH9 535 aa15.88■□□□□ 0.13
ABCA2-215ENST00000470535 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
ABCA2-215ENST00000470535 PROM2Q8N271 834 aa15.88■□□□□ 0.13
ABCA2-215ENST00000470535 PIGBQ92521 554 aa15.88■□□□□ 0.13
ABCA2-215ENST00000470535 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
ABCA2-215ENST00000470535 CABP4P57796 275 aa15.87■□□□□ 0.13
ABCA2-215ENST00000470535 PHACTR3Q96KR7 559 aa15.87■□□□□ 0.13
ABCA2-215ENST00000470535 PNNQ9H307 717 aaKnown RBP15.87■□□□□ 0.13
ABCA2-215ENST00000470535 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
ABCA2-215ENST00000470535 RREB1Q92766 1687 aa15.86■□□□□ 0.13
ABCA2-215ENST00000470535 SMARCC1Q92922 1105 aaPredicted RBP15.86■□□□□ 0.13
ABCA2-215ENST00000470535 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
ABCA2-215ENST00000470535 WDR43Q15061 677 aaKnown RBP eCLIP15.85■□□□□ 0.13
ABCA2-215ENST00000470535 SLC27A3Q5K4L6 730 aa15.85■□□□□ 0.13
ABCA2-215ENST00000470535 PALLDQ8WX93 1383 aa15.85■□□□□ 0.13
ABCA2-215ENST00000470535 RNMTO43148 476 aaKnown RBP15.84■□□□□ 0.13
ABCA2-215ENST00000470535 LGR6Q9HBX8 967 aa15.84■□□□□ 0.13
ABCA2-215ENST00000470535 MAP3K5Q99683 1374 aa15.84■□□□□ 0.13
ABCA2-215ENST00000470535 NUP188Q5SRE5 1749 aa15.83■□□□□ 0.13
ABCA2-215ENST00000470535 ITGB4P16144 1822 aa15.83■□□□□ 0.12
ABCA2-215ENST00000470535 NFATC2IPQ8NCF5 419 aa15.83■□□□□ 0.12
ABCA2-215ENST00000470535 CCNL1Q9UK58 526 aaPredicted RBP15.83■□□□□ 0.12
ABCA2-215ENST00000470535 MAPK8IP3Q9UPT6 1336 aa15.83■□□□□ 0.12
ABCA2-215ENST00000470535 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
ABCA2-215ENST00000470535 LRRC4BQ9NT99 713 aa15.82■□□□□ 0.12
ABCA2-215ENST00000470535 STK32BQ9NY57 414 aa15.82■□□□□ 0.12
ABCA2-215ENST00000470535 ASAP1Q9ULH1 1129 aa15.82■□□□□ 0.12
ABCA2-215ENST00000470535 KCNQ4P56696 695 aa15.81■□□□□ 0.12
ABCA2-215ENST00000470535 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
ABCA2-215ENST00000470535 PLEKHF1Q96S99 279 aa15.81■□□□□ 0.12
ABCA2-215ENST00000470535 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
ABCA2-215ENST00000470535 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
ABCA2-215ENST00000470535 TEFQ10587 303 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms