RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 PRIM1P49642 420 aaKnown RBP20.55■□□□□ 0.88
STRC-208ENST00000470279 MSL1Q68DK7 614 aa20.55■□□□□ 0.88
STRC-208ENST00000470279 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
STRC-208ENST00000470279 CD163L1Q9NR16 1453 aa20.55■□□□□ 0.88
STRC-208ENST00000470279 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
STRC-208ENST00000470279 CCNL1Q9UK58 526 aaPredicted RBP20.54■□□□□ 0.88
STRC-208ENST00000470279 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
STRC-208ENST00000470279 C5P01031 1676 aa20.51■□□□□ 0.87
STRC-208ENST00000470279 LTV1Q96GA3 475 aaPredicted RBP20.49■□□□□ 0.87
STRC-208ENST00000470279 ROCK2O75116 1388 aaKnown RBP20.48■□□□□ 0.87
STRC-208ENST00000470279 IP6K1Q92551 441 aa20.48■□□□□ 0.87
STRC-208ENST00000470279 RGPD2P0DJD1 1756 aa20.48■□□□□ 0.87
STRC-208ENST00000470279 USP47Q96K76 1375 aa20.47■□□□□ 0.87
STRC-208ENST00000470279 EDC4Q6P2E9 1401 aaKnown RBP20.47■□□□□ 0.87
STRC-208ENST00000470279 L3MBTL2Q969R5 705 aa20.47■□□□□ 0.87
STRC-208ENST00000470279 TAF1LQ8IZX4 1826 aa20.47■□□□□ 0.87
STRC-208ENST00000470279 MEGF6O75095 1541 aa20.47■□□□□ 0.87
STRC-208ENST00000470279 KIF3CO14782 793 aa20.45■□□□□ 0.86
STRC-208ENST00000470279 ZCRB1Q8TBF4 217 aaKnown RBP20.45■□□□□ 0.86
STRC-208ENST00000470279 HDGFL2Q7Z4V5 671 aaPredicted RBP20.43■□□□□ 0.86
STRC-208ENST00000470279 IGSF1Q8N6C5 1336 aa20.43■□□□□ 0.86
STRC-208ENST00000470279 TOGARAM1Q9Y4F4 1720 aa20.42■□□□□ 0.86
STRC-208ENST00000470279 FLAD1Q8NFF5 587 aa20.42■□□□□ 0.86
STRC-208ENST00000470279 TMC1Q8TDI8 760 aa20.42■□□□□ 0.86
STRC-208ENST00000470279 WWC3Q9ULE0 1092 aa20.41■□□□□ 0.86
STRC-208ENST00000470279 A0A1W2PP64 1363 aa20.41■□□□□ 0.86
STRC-208ENST00000470279 CICQ96RK0 1608 aaPredicted RBP20.41■□□□□ 0.86
STRC-208ENST00000470279 C4BP0C0L5 1744 aa20.4■□□□□ 0.86
STRC-208ENST00000470279 APLP1P51693 650 aa20.4■□□□□ 0.86
STRC-208ENST00000470279 SLC12A5Q9H2X9 1139 aa20.4■□□□□ 0.86
STRC-208ENST00000470279 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.86
STRC-208ENST00000470279 MAP3K19Q56UN5 1328 aa20.39■□□□□ 0.85
STRC-208ENST00000470279 HOXC9P31274 260 aa20.39■□□□□ 0.85
STRC-208ENST00000470279 DNAJC5GQ8N7S2 189 aa20.38■□□□□ 0.85
STRC-208ENST00000470279 PALLDQ8WX93 1383 aa20.37■□□□□ 0.85
STRC-208ENST00000470279 AMIGO3Q86WK7 504 aa20.37■□□□□ 0.85
STRC-208ENST00000470279 TERF2IPQ9NYB0 399 aa20.36■□□□□ 0.85
STRC-208ENST00000470279 HMGB2P26583 209 aaKnown RBP20.35■□□□□ 0.85
STRC-208ENST00000470279 AMPHP49418 695 aa20.34■□□□□ 0.85
STRC-208ENST00000470279 WDR90Q96KV7 1748 aa20.33■□□□□ 0.85
STRC-208ENST00000470279 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.85
STRC-208ENST00000470279 ITGB4P16144 1822 aa20.33■□□□□ 0.85
STRC-208ENST00000470279 FBLN1P23142 703 aa20.33■□□□□ 0.85
STRC-208ENST00000470279 NBPF6Q5VWK0 638 aa20.33■□□□□ 0.85
STRC-208ENST00000470279 AK7Q96M32 723 aa20.33■□□□□ 0.85
STRC-208ENST00000470279 NBPF4Q96M43 638 aa20.33■□□□□ 0.85
STRC-208ENST00000470279 TOMM70O94826 608 aa20.32■□□□□ 0.84
STRC-208ENST00000470279 USHBP1Q8N6Y0 703 aa20.32■□□□□ 0.84
STRC-208ENST00000470279 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
STRC-208ENST00000470279 KIAA1551Q9HCM1 1747 aa20.31■□□□□ 0.84
STRC-208ENST00000470279 NSD3Q9BZ95 1437 aa20.31■□□□□ 0.84
STRC-208ENST00000470279 PHF14O94880 888 aa20.31■□□□□ 0.84
STRC-208ENST00000470279 SMIM5Q71RC9 77 aa20.31■□□□□ 0.84
STRC-208ENST00000470279 COG3Q96JB2 828 aa20.31■□□□□ 0.84
STRC-208ENST00000470279 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.3■□□□□ 0.84
STRC-208ENST00000470279 MPRIPQ6WCQ1 1025 aa20.3■□□□□ 0.84
STRC-208ENST00000470279 RAPGEF4Q8WZA2 1011 aa20.3■□□□□ 0.84
STRC-208ENST00000470279 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
STRC-208ENST00000470279 PCDH11XQ9BZA7 1347 aa20.29■□□□□ 0.84
STRC-208ENST00000470279 PCDH11YQ9BZA8 1340 aa20.29■□□□□ 0.84
STRC-208ENST00000470279 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
STRC-208ENST00000470279 MAP2P11137 1827 aaKnown RBP20.29■□□□□ 0.84
STRC-208ENST00000470279 PXDNLA1KZ92 1463 aa20.28■□□□□ 0.84
STRC-208ENST00000470279 N4BP2Q86UW6 1770 aaPredicted RBP20.27■□□□□ 0.84
STRC-208ENST00000470279 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
STRC-208ENST00000470279 SMARCC1Q92922 1105 aaPredicted RBP20.27■□□□□ 0.84
STRC-208ENST00000470279 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.83
STRC-208ENST00000470279 SSFA2P28290 1259 aa20.26■□□□□ 0.83
STRC-208ENST00000470279 COL13A1Q5TAT6 717 aaPredicted RBP20.26■□□□□ 0.83
STRC-208ENST00000470279 PUS7Q96PZ0 661 aaKnown RBP20.26■□□□□ 0.83
STRC-208ENST00000470279 NMRK2Q9NPI5 230 aa20.26■□□□□ 0.83
STRC-208ENST00000470279 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
STRC-208ENST00000470279 CARD11Q9BXL7 1154 aa20.25■□□□□ 0.83
STRC-208ENST00000470279 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
STRC-208ENST00000470279 CYP27B1O15528 508 aa20.24■□□□□ 0.83
STRC-208ENST00000470279 LINC00116Q8NCU8 138 aa20.24■□□□□ 0.83
STRC-208ENST00000470279 PCNTO95613 3336 aa20.24■□□□□ 0.83
STRC-208ENST00000470279 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
STRC-208ENST00000470279 KLRG1Q96E93 195 aa20.23■□□□□ 0.83
STRC-208ENST00000470279 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
STRC-208ENST00000470279 PIGBQ92521 554 aa20.22■□□□□ 0.83
STRC-208ENST00000470279 CAPN15O75808 1086 aa20.21■□□□□ 0.83
STRC-208ENST00000470279 MMP10P09238 476 aa20.21■□□□□ 0.83
STRC-208ENST00000470279 HTRA3P83110 453 aa20.21■□□□□ 0.83
STRC-208ENST00000470279 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
STRC-208ENST00000470279 BCS1LQ9Y276 419 aa20.21■□□□□ 0.83
STRC-208ENST00000470279 BRCA1P38398 1863 aaKnown RBP20.21■□□□□ 0.83
STRC-208ENST00000470279 C10orf71Q711Q0 1435 aa20.2■□□□□ 0.82
STRC-208ENST00000470279 LOC102724428A0A0B4J2F2 783 aa20.2■□□□□ 0.82
STRC-208ENST00000470279 SIK1P57059 783 aa20.2■□□□□ 0.82
STRC-208ENST00000470279 GNPATO15228 680 aa20.19■□□□□ 0.82
STRC-208ENST00000470279 TGFB2P61812 414 aa20.19■□□□□ 0.82
STRC-208ENST00000470279 INSRP06213 1382 aa20.19■□□□□ 0.82
STRC-208ENST00000470279 A0A0G2JLW4 131 aa20.18■□□□□ 0.82
STRC-208ENST00000470279 HSP90AB2PQ58FF8 381 aa20.18■□□□□ 0.82
STRC-208ENST00000470279 ARHGAP27Q6ZUM4 889 aa20.18■□□□□ 0.82
STRC-208ENST00000470279 ITPK1Q13572 414 aa20.17■□□□□ 0.82
STRC-208ENST00000470279 ARFGEF1Q9Y6D6 1849 aa20.17■□□□□ 0.82
STRC-208ENST00000470279 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
STRC-208ENST00000470279 FSTL1Q12841 308 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms